RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 SYT10Q6XYQ8 523 aa15.48■□□□□ 0.07
VAPA-202ENST00000400000 NOP9Q86U38 636 aaKnown RBP15.48■□□□□ 0.07
VAPA-202ENST00000400000 SPATA24Q86W54 205 aa15.48■□□□□ 0.07
VAPA-202ENST00000400000 RDH13Q8NBN7 331 aa15.48■□□□□ 0.07
VAPA-202ENST00000400000 FRMD4BQ9Y2L6 1034 aa15.48■□□□□ 0.07
VAPA-202ENST00000400000 PRIM1P49642 420 aaKnown RBP15.47■□□□□ 0.07
VAPA-202ENST00000400000 NAA25Q14CX7 972 aa15.47■□□□□ 0.07
VAPA-202ENST00000400000 EYA3Q99504 573 aa15.47■□□□□ 0.07
VAPA-202ENST00000400000 ZFYP08048 801 aaPredicted RBP15.47■□□□□ 0.07
VAPA-202ENST00000400000 GNAQP50148 359 aa15.47■□□□□ 0.07
VAPA-202ENST00000400000 IVNS1ABPQ9Y6Y0 642 aa15.47■□□□□ 0.07
VAPA-202ENST00000400000 LRMPQ12912 555 aa15.47■□□□□ 0.07
VAPA-202ENST00000400000 NCAPD3P42695 1498 aa15.47■□□□□ 0.07
VAPA-202ENST00000400000 RRP9O43818 475 aaKnown RBP15.47■□□□□ 0.07
VAPA-202ENST00000400000 BEND3Q5T5X7 828 aa15.47■□□□□ 0.07
VAPA-202ENST00000400000 CMTR1Q8N1G2 835 aaKnown RBP15.47■□□□□ 0.07
VAPA-202ENST00000400000 HPDP32754 393 aaPredicted RBP15.46■□□□□ 0.07
VAPA-202ENST00000400000 DPP8Q6V1X1 898 aaPredicted RBP15.46■□□□□ 0.07
VAPA-202ENST00000400000 RTL9Q8NET4 1388 aa15.46■□□□□ 0.07
VAPA-202ENST00000400000 H0YIN7 160 aa15.46■□□□□ 0.07
VAPA-202ENST00000400000 HSPA4P34932 840 aa15.46■□□□□ 0.07
VAPA-202ENST00000400000 FAM182BQ5T319 152 aa15.46■□□□□ 0.07
VAPA-202ENST00000400000 ARHGAP27Q6ZUM4 889 aa15.46■□□□□ 0.07
VAPA-202ENST00000400000 ATP8B2P98198 1209 aa15.46■□□□□ 0.07
VAPA-202ENST00000400000 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.46■□□□□ 0.07
VAPA-202ENST00000400000 STAMQ92783 540 aa15.46■□□□□ 0.07
VAPA-202ENST00000400000 A1BGP04217 495 aa15.46■□□□□ 0.07
VAPA-202ENST00000400000 MKRN3Q13064 507 aaKnown RBP15.46■□□□□ 0.07
VAPA-202ENST00000400000 CEP57Q86XR8 500 aa15.46■□□□□ 0.07
VAPA-202ENST00000400000 CCT6BQ92526 530 aa15.46■□□□□ 0.07
VAPA-202ENST00000400000 WDR44Q5JSH3 913 aa15.46■□□□□ 0.06
VAPA-202ENST00000400000 NEMFO60524 1076 aa15.46■□□□□ 0.06
VAPA-202ENST00000400000 BSPRYQ5W0U4 402 aa15.46■□□□□ 0.06
VAPA-202ENST00000400000 EHBP1Q8NDI1 1231 aa15.46■□□□□ 0.06
VAPA-202ENST00000400000 TRPC3Q13507 836 aa15.45■□□□□ 0.06
VAPA-202ENST00000400000 TYRO3Q06418 890 aa15.45■□□□□ 0.06
VAPA-202ENST00000400000 MICALL1Q8N3F8 863 aa15.45■□□□□ 0.06
VAPA-202ENST00000400000 PDE4DQ08499 809 aa15.45■□□□□ 0.06
VAPA-202ENST00000400000 NELFCDQ8IXH7 590 aa15.45■□□□□ 0.06
VAPA-202ENST00000400000 TBC1D32Q96NH3 1257 aa15.45■□□□□ 0.06
VAPA-202ENST00000400000 USP21Q9UK80 565 aa15.45■□□□□ 0.06
VAPA-202ENST00000400000 SPOPO43791 374 aa15.45■□□□□ 0.06
VAPA-202ENST00000400000 HSPA1LP34931 641 aa15.45■□□□□ 0.06
VAPA-202ENST00000400000 FAM47AQ5JRC9 791 aa15.45■□□□□ 0.06
VAPA-202ENST00000400000 GCP02774 474 aa15.45■□□□□ 0.06
VAPA-202ENST00000400000 G2E3Q7L622 706 aa15.45■□□□□ 0.06
VAPA-202ENST00000400000 METTL13Q8N6R0 699 aa15.45■□□□□ 0.06
VAPA-202ENST00000400000 SMC6Q96SB8 1091 aa15.45■□□□□ 0.06
VAPA-202ENST00000400000 C14orf93Q9H972 538 aaKnown RBP15.45■□□□□ 0.06
VAPA-202ENST00000400000 NSMFQ6X4W1 530 aa15.44■□□□□ 0.06
VAPA-202ENST00000400000 SV2BQ7L1I2 683 aa15.44■□□□□ 0.06
VAPA-202ENST00000400000 MAPKAPK5Q8IW41 473 aa15.44■□□□□ 0.06
VAPA-202ENST00000400000 NOC4LQ9BVI4 516 aaKnown RBP15.44■□□□□ 0.06
VAPA-202ENST00000400000 GGA1Q9UJY5 639 aa15.44■□□□□ 0.06
VAPA-202ENST00000400000 SMCR8Q8TEV9 937 aaPredicted RBP15.44■□□□□ 0.06
VAPA-202ENST00000400000 PHKBQ93100 1093 aa15.44■□□□□ 0.06
VAPA-202ENST00000400000 JAKMIP2Q96AA8 810 aa15.44■□□□□ 0.06
VAPA-202ENST00000400000 GOLGA6L9A6NEM1 432 aa15.44■□□□□ 0.06
VAPA-202ENST00000400000 ATP2A1O14983 1001 aa15.44■□□□□ 0.06
VAPA-202ENST00000400000 DOK7Q18PE1 504 aa15.44■□□□□ 0.06
VAPA-202ENST00000400000 EPSTI1Q96J88 318 aa15.44■□□□□ 0.06
VAPA-202ENST00000400000 CFBP00751 764 aa15.44■□□□□ 0.06
VAPA-202ENST00000400000 EPB41P11171 864 aaKnown RBP15.44■□□□□ 0.06
VAPA-202ENST00000400000 NOLC1Q14978 699 aaKnown RBP eCLIP15.44■□□□□ 0.06
VAPA-202ENST00000400000 SEPT14Q6ZU15 432 aa15.44■□□□□ 0.06
VAPA-202ENST00000400000 TGFBRAP1Q8WUH2 860 aa15.44■□□□□ 0.06
VAPA-202ENST00000400000 MYO1AQ9UBC5 1043 aa15.44■□□□□ 0.06
VAPA-202ENST00000400000 V9GY48 417 aaPredicted RBP15.44■□□□□ 0.06
VAPA-202ENST00000400000 CFAP65Q6ZU64 1925 aaKnown RBP15.43■□□□□ 0.06
VAPA-202ENST00000400000 TAB3Q8N5C8 712 aaPredicted RBP15.43■□□□□ 0.06
VAPA-202ENST00000400000 ORAI2Q96SN7 254 aa15.43■□□□□ 0.06
VAPA-202ENST00000400000 NAP1L3Q99457 506 aaPredicted RBP15.43■□□□□ 0.06
VAPA-202ENST00000400000 HIBADHP31937 336 aaKnown RBP15.43■□□□□ 0.06
VAPA-202ENST00000400000 UTP14CQ5TAP6 766 aaKnown RBP15.43■□□□□ 0.06
VAPA-202ENST00000400000 FAM173BQ6P4H8 233 aa15.43■□□□□ 0.06
VAPA-202ENST00000400000 NSRP1Q9H0G5 558 aaKnown RBP15.43■□□□□ 0.06
VAPA-202ENST00000400000 ARFGAP3Q9NP61 516 aa15.43■□□□□ 0.06
VAPA-202ENST00000400000 B4DLN1 442 aa15.43■□□□□ 0.06
VAPA-202ENST00000400000 MRPL12P52815 198 aaKnown RBP15.43■□□□□ 0.06
VAPA-202ENST00000400000 GTPBP4Q9BZE4 634 aaKnown RBP15.43■□□□□ 0.06
VAPA-202ENST00000400000 ANAPC4Q9UJX5 808 aa15.43■□□□□ 0.06
VAPA-202ENST00000400000 PLCH2O75038 1416 aa15.43■□□□□ 0.06
VAPA-202ENST00000400000 STRN3Q13033 797 aa15.43■□□□□ 0.06
VAPA-202ENST00000400000 TBC1D10BQ4KMP7 808 aaPredicted RBP15.43■□□□□ 0.06
VAPA-202ENST00000400000 RUFY3Q7L099 469 aa15.43■□□□□ 0.06
VAPA-202ENST00000400000 CCDC77Q9BR77 488 aa15.43■□□□□ 0.06
VAPA-202ENST00000400000 FRMPD2Q68DX3 1309 aaPredicted RBP15.43■□□□□ 0.06
VAPA-202ENST00000400000 A0A1B0GUL7 405 aa15.43■□□□□ 0.06
VAPA-202ENST00000400000 TCP10L2B9ZVM9 353 aa15.43■□□□□ 0.06
VAPA-202ENST00000400000 CASC4Q6P4E1 433 aa15.43■□□□□ 0.06
VAPA-202ENST00000400000 C4orf50Q6ZRC1 276 aa15.43■□□□□ 0.06
VAPA-202ENST00000400000 TRIM7Q9C029 511 aa15.43■□□□□ 0.06
VAPA-202ENST00000400000 TTC36A6NLP5 189 aa15.42■□□□□ 0.06
VAPA-202ENST00000400000 STX10O60499 249 aa15.42■□□□□ 0.06
VAPA-202ENST00000400000 GAS8O95995 478 aa15.42■□□□□ 0.06
VAPA-202ENST00000400000 CALML3P27482 149 aa15.42■□□□□ 0.06
VAPA-202ENST00000400000 GADL1Q6ZQY3 521 aa15.42■□□□□ 0.06
VAPA-202ENST00000400000 CPLX4Q7Z7G2 160 aa15.42■□□□□ 0.06
VAPA-202ENST00000400000 SESTD1Q86VW0 696 aa15.42■□□□□ 0.06
VAPA-202ENST00000400000 GNA11P29992 359 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms