RNA–Protein interactions for RNA: ENST00000399649.5

CACNA1C-219, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-219ENST00000399649 ERCC3P19447 782 aa13.77□□□□□ -0.2
CACNA1C-219ENST00000399649 ACSBG1Q96GR2 724 aa13.77□□□□□ -0.2
CACNA1C-219ENST00000399649 TAOK1Q7L7X3 1001 aa13.77□□□□□ -0.21
CACNA1C-219ENST00000399649 EXOC7Q9UPT5 735 aa13.77□□□□□ -0.21
CACNA1C-219ENST00000399649 IL16Q14005 1332 aa13.77□□□□□ -0.21
CACNA1C-219ENST00000399649 HPDP32754 393 aaPredicted RBP13.77□□□□□ -0.21
CACNA1C-219ENST00000399649 PPP2R3AQ06190 1150 aa13.77□□□□□ -0.21
CACNA1C-219ENST00000399649 TRIM14Q14142 442 aa13.77□□□□□ -0.21
CACNA1C-219ENST00000399649 RILPL1Q5EBL4 403 aa13.77□□□□□ -0.21
CACNA1C-219ENST00000399649 GSDMBQ8TAX9 411 aa13.77□□□□□ -0.21
CACNA1C-219ENST00000399649 ZKSCAN3Q9BRR0 538 aa13.77□□□□□ -0.21
CACNA1C-219ENST00000399649 IRX5P78411 483 aaPredicted RBP13.77□□□□□ -0.21
CACNA1C-219ENST00000399649 CDAN1Q8IWY9 1227 aa13.77□□□□□ -0.21
CACNA1C-219ENST00000399649 IQUBQ8NA54 791 aa13.77□□□□□ -0.21
CACNA1C-219ENST00000399649 XAGE3Q8WTP9 111 aa13.77□□□□□ -0.21
CACNA1C-219ENST00000399649 MAGI1Q96QZ7 1491 aaPredicted RBP13.76□□□□□ -0.21
CACNA1C-219ENST00000399649 CCDC169A6NNP5 214 aa13.76□□□□□ -0.21
CACNA1C-219ENST00000399649 CETN3O15182 167 aa13.76□□□□□ -0.21
CACNA1C-219ENST00000399649 BUB1BO60566 1050 aaPredicted RBP13.76□□□□□ -0.21
CACNA1C-219ENST00000399649 FAM160A1Q05DH4 1040 aa13.76□□□□□ -0.21
CACNA1C-219ENST00000399649 CCDC125Q86Z20 511 aa13.76□□□□□ -0.21
CACNA1C-219ENST00000399649 TCEANC2Q96MN5 208 aa13.76□□□□□ -0.21
CACNA1C-219ENST00000399649 PKD2L1Q9P0L9 805 aa13.76□□□□□ -0.21
CACNA1C-219ENST00000399649 PSMD6Q15008 389 aa13.76□□□□□ -0.21
CACNA1C-219ENST00000399649 ZNF365Q70YC5 407 aa13.76□□□□□ -0.21
CACNA1C-219ENST00000399649 ZNF710Q8N1W2 664 aa13.76□□□□□ -0.21
CACNA1C-219ENST00000399649 ZCRB1Q8TBF4 217 aaKnown RBP13.76□□□□□ -0.21
CACNA1C-219ENST00000399649 ZBTB9Q96C00 473 aa13.76□□□□□ -0.21
CACNA1C-219ENST00000399649 IQGAP2Q13576 1575 aa13.76□□□□□ -0.21
CACNA1C-219ENST00000399649 CCT6AP40227 531 aaKnown RBP13.76□□□□□ -0.21
CACNA1C-219ENST00000399649 APOBRQ0VD83 1088 aa13.76□□□□□ -0.21
CACNA1C-219ENST00000399649 BAG1Q99933 345 aaPredicted RBP13.76□□□□□ -0.21
CACNA1C-219ENST00000399649 NOD1Q9Y239 953 aa13.76□□□□□ -0.21
CACNA1C-219ENST00000399649 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.76□□□□□ -0.21
CACNA1C-219ENST00000399649 ARHGEF2Q92974 986 aaKnown RBP13.76□□□□□ -0.21
CACNA1C-219ENST00000399649 FAM114A2Q9NRY5 505 aa13.76□□□□□ -0.21
CACNA1C-219ENST00000399649 RFX1P22670 979 aa13.76□□□□□ -0.21
CACNA1C-219ENST00000399649 EYA3Q99504 573 aa13.76□□□□□ -0.21
CACNA1C-219ENST00000399649 GRM8O00222 908 aa13.75□□□□□ -0.21
CACNA1C-219ENST00000399649 TRAF5O00463 557 aa13.75□□□□□ -0.21
CACNA1C-219ENST00000399649 LDHBP07195 334 aaKnown RBP13.75□□□□□ -0.21
CACNA1C-219ENST00000399649 MCUR1Q96AQ8 359 aa13.75□□□□□ -0.21
CACNA1C-219ENST00000399649 ANKRD2Q9GZV1 360 aa13.75□□□□□ -0.21
CACNA1C-219ENST00000399649 ARAP1Q96P48 1450 aa13.75□□□□□ -0.21
CACNA1C-219ENST00000399649 ELP1O95163 1332 aa13.75□□□□□ -0.21
CACNA1C-219ENST00000399649 POLD1P28340 1107 aa13.75□□□□□ -0.21
CACNA1C-219ENST00000399649 PPP2R5CQ13362 524 aa13.75□□□□□ -0.21
CACNA1C-219ENST00000399649 CNNM4Q6P4Q7 775 aa13.75□□□□□ -0.21
CACNA1C-219ENST00000399649 CCDC170Q8IYT3 715 aa13.75□□□□□ -0.21
CACNA1C-219ENST00000399649 JDP2Q8WYK2 163 aa13.75□□□□□ -0.21
CACNA1C-219ENST00000399649 NCAPGQ9BPX3 1015 aa13.75□□□□□ -0.21
CACNA1C-219ENST00000399649 TMOD4Q9NZQ9 345 aa13.75□□□□□ -0.21
CACNA1C-219ENST00000399649 I3L4J1 428 aa13.75□□□□□ -0.21
CACNA1C-219ENST00000399649 PLCD1P51178 756 aa13.75□□□□□ -0.21
CACNA1C-219ENST00000399649 FBXO31Q5XUX0 539 aaPredicted RBP13.75□□□□□ -0.21
CACNA1C-219ENST00000399649 ARHGAP24Q8N264 748 aa13.75□□□□□ -0.21
CACNA1C-219ENST00000399649 STK24Q9Y6E0 443 aa13.75□□□□□ -0.21
CACNA1C-219ENST00000399649 FAM83GA6ND36 823 aa13.75□□□□□ -0.21
CACNA1C-219ENST00000399649 RIMBP2O15034 1052 aa13.75□□□□□ -0.21
CACNA1C-219ENST00000399649 RFC1P35251 1148 aaPredicted RBP13.75□□□□□ -0.21
CACNA1C-219ENST00000399649 MIGA1Q8NAN2 632 aa13.75□□□□□ -0.21
CACNA1C-219ENST00000399649 NOX5Q96PH1 765 aa13.75□□□□□ -0.21
CACNA1C-219ENST00000399649 ZC3H12CQ9C0D7 883 aaKnown RBP13.75□□□□□ -0.21
CACNA1C-219ENST00000399649 NACA2Q9H009 215 aa13.74□□□□□ -0.21
CACNA1C-219ENST00000399649 ALDH1L1O75891 902 aa13.74□□□□□ -0.21
CACNA1C-219ENST00000399649 PDE1AP54750 535 aa13.74□□□□□ -0.21
CACNA1C-219ENST00000399649 PPP2R5DQ14738 602 aa13.74□□□□□ -0.21
CACNA1C-219ENST00000399649 C8orf74Q6P047 294 aa13.74□□□□□ -0.21
CACNA1C-219ENST00000399649 CYP26C1Q6V0L0 522 aa13.74□□□□□ -0.21
CACNA1C-219ENST00000399649 C8orf37Q96NL8 207 aa13.74□□□□□ -0.21
CACNA1C-219ENST00000399649 NAPGQ99747 312 aaPredicted RBP13.74□□□□□ -0.21
CACNA1C-219ENST00000399649 KIAA0586Q9BVV6 1533 aa13.74□□□□□ -0.21
CACNA1C-219ENST00000399649 RIOK3O14730 519 aaKnown RBP13.74□□□□□ -0.21
CACNA1C-219ENST00000399649 TMCO4Q5TGY1 634 aa13.74□□□□□ -0.21
CACNA1C-219ENST00000399649 TSNAXIP1Q2TAA8 658 aa13.74□□□□□ -0.21
CACNA1C-219ENST00000399649 UTP14CQ5TAP6 766 aaKnown RBP13.74□□□□□ -0.21
CACNA1C-219ENST00000399649 KRBA2Q6ZNG9 492 aa13.74□□□□□ -0.21
CACNA1C-219ENST00000399649 CHST3Q7LGC8 479 aa13.74□□□□□ -0.21
CACNA1C-219ENST00000399649 RBM17Q96I25 401 aaKnown RBP13.74□□□□□ -0.21
CACNA1C-219ENST00000399649 TRIM6Q9C030 488 aaPredicted RBP13.74□□□□□ -0.21
CACNA1C-219ENST00000399649 RABGAP1Q9Y3P9 1069 aa13.74□□□□□ -0.21
CACNA1C-219ENST00000399649 A0A1B0GUL7 405 aa13.74□□□□□ -0.21
CACNA1C-219ENST00000399649 VWA3AA6NCI4 1184 aa13.74□□□□□ -0.21
CACNA1C-219ENST00000399649 ZNF853P0CG23 659 aa13.74□□□□□ -0.21
CACNA1C-219ENST00000399649 HHATQ5VTY9 493 aa13.74□□□□□ -0.21
CACNA1C-219ENST00000399649 C10orf67Q8IYJ2 551 aa13.74□□□□□ -0.21
CACNA1C-219ENST00000399649 TOP2BQ02880 1626 aa13.74□□□□□ -0.21
CACNA1C-219ENST00000399649 TIAM1Q13009 1591 aa13.74□□□□□ -0.21
CACNA1C-219ENST00000399649 PTPDC1A2A3K4 754 aa13.73□□□□□ -0.21
CACNA1C-219ENST00000399649 CHMP2AO43633 222 aa13.73□□□□□ -0.21
CACNA1C-219ENST00000399649 ANXA1P04083 346 aa13.73□□□□□ -0.21
CACNA1C-219ENST00000399649 HDAC1Q13547 482 aaPredicted RBP13.73□□□□□ -0.21
CACNA1C-219ENST00000399649 BRDTQ58F21 947 aaPredicted RBP13.73□□□□□ -0.21
CACNA1C-219ENST00000399649 SH2D4BQ5SQS7 431 aa13.73□□□□□ -0.21
CACNA1C-219ENST00000399649 CCDC94Q9BW85 323 aaPredicted RBP13.73□□□□□ -0.21
CACNA1C-219ENST00000399649 PICK1Q9NRD5 415 aa13.73□□□□□ -0.21
CACNA1C-219ENST00000399649 TUBB2AQ13885 445 aa13.73□□□□□ -0.21
CACNA1C-219ENST00000399649 LGSNQ5TDP6 509 aa13.73□□□□□ -0.21
CACNA1C-219ENST00000399649 LMBR1LQ6UX01 489 aa13.73□□□□□ -0.21
CACNA1C-219ENST00000399649 COPS6Q7L5N1 327 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms