RNA–Protein interactions for RNA: ENST00000399606.5

CACNA1C-210, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-210ENST00000399606 PI4KAP1Q8N8J0 262 aa12.34□□□□□ -0.43
CACNA1C-210ENST00000399606 MIPOL1Q8TD10 442 aa12.34□□□□□ -0.43
CACNA1C-210ENST00000399606 PPFIA1Q13136 1202 aa12.34□□□□□ -0.43
CACNA1C-210ENST00000399606 AGTPBP1Q9UPW5 1226 aa12.34□□□□□ -0.43
CACNA1C-210ENST00000399606 NSD2O96028 1365 aa12.33□□□□□ -0.44
CACNA1C-210ENST00000399606 E7EVH7 732 aa12.33□□□□□ -0.44
CACNA1C-210ENST00000399606 KIF3CO14782 793 aa12.33□□□□□ -0.44
CACNA1C-210ENST00000399606 SSFA2P28290 1259 aa12.33□□□□□ -0.44
CACNA1C-210ENST00000399606 KIAA1841Q6NSI8 718 aa12.33□□□□□ -0.44
CACNA1C-210ENST00000399606 NFATC2IPQ8NCF5 419 aa12.33□□□□□ -0.44
CACNA1C-210ENST00000399606 PRPF6O94906 941 aaKnown RBP12.33□□□□□ -0.44
CACNA1C-210ENST00000399606 XPAP23025 273 aaPredicted RBP12.33□□□□□ -0.44
CACNA1C-210ENST00000399606 CALML3P27482 149 aa12.33□□□□□ -0.44
CACNA1C-210ENST00000399606 GTF2A1P52655 376 aaPredicted RBP12.33□□□□□ -0.44
CACNA1C-210ENST00000399606 SMTNP53814 917 aa12.33□□□□□ -0.44
CACNA1C-210ENST00000399606 C20orf194Q5TEA3 1177 aa12.33□□□□□ -0.44
CACNA1C-210ENST00000399606 PYM1Q9BRP8 204 aaKnown RBP12.33□□□□□ -0.44
CACNA1C-210ENST00000399606 LMCD1Q9NZU5 365 aa12.33□□□□□ -0.44
CACNA1C-210ENST00000399606 ANKFY1Q9P2R3 1169 aa12.33□□□□□ -0.44
CACNA1C-210ENST00000399606 ESYT2A0FGR8 921 aa12.33□□□□□ -0.44
CACNA1C-210ENST00000399606 GOLGA6CA6NDK9 693 aa12.33□□□□□ -0.44
CACNA1C-210ENST00000399606 GOLGA6BA6NDN3 693 aa12.33□□□□□ -0.44
CACNA1C-210ENST00000399606 GOLGA6DP0CG33 693 aa12.33□□□□□ -0.44
CACNA1C-210ENST00000399606 SLC9C2Q5TAH2 1124 aa12.33□□□□□ -0.44
CACNA1C-210ENST00000399606 GOLGA6AQ9NYA3 693 aa12.33□□□□□ -0.44
CACNA1C-210ENST00000399606 ASIC1P78348 528 aa12.33□□□□□ -0.44
CACNA1C-210ENST00000399606 SLC9A5Q14940 896 aa12.33□□□□□ -0.44
CACNA1C-210ENST00000399606 CNNM2Q9H8M5 875 aa12.33□□□□□ -0.44
CACNA1C-210ENST00000399606 CHPF2Q9P2E5 772 aa12.33□□□□□ -0.44
CACNA1C-210ENST00000399606 AFMP43652 599 aa12.33□□□□□ -0.44
CACNA1C-210ENST00000399606 RNASELQ05823 741 aaKnown RBP12.33□□□□□ -0.44
CACNA1C-210ENST00000399606 CKAP4Q07065 602 aaKnown RBP12.33□□□□□ -0.44
CACNA1C-210ENST00000399606 CARD10Q9BWT7 1032 aa12.33□□□□□ -0.44
CACNA1C-210ENST00000399606 IFI16Q16666 785 aaKnown RBP12.32□□□□□ -0.44
CACNA1C-210ENST00000399606 DCAF15Q66K64 600 aa12.32□□□□□ -0.44
CACNA1C-210ENST00000399606 HS2ST1Q7LGA3 356 aa12.32□□□□□ -0.44
CACNA1C-210ENST00000399606 EVI5LQ96CN4 794 aa12.32□□□□□ -0.44
CACNA1C-210ENST00000399606 MNAT1P51948 309 aa12.32□□□□□ -0.44
CACNA1C-210ENST00000399606 IDI1Q13907 227 aa12.32□□□□□ -0.44
CACNA1C-210ENST00000399606 TRMT1Q9NXH9 659 aaKnown RBP12.32□□□□□ -0.44
CACNA1C-210ENST00000399606 IGBP1P78318 339 aa12.32□□□□□ -0.44
CACNA1C-210ENST00000399606 ORC3Q9UBD5 711 aaPredicted RBP12.32□□□□□ -0.44
CACNA1C-210ENST00000399606 HIBADHP31937 336 aaKnown RBP12.32□□□□□ -0.44
CACNA1C-210ENST00000399606 KRT79Q5XKE5 535 aa12.32□□□□□ -0.44
CACNA1C-210ENST00000399606 PRDM5Q9NQX1 630 aaPredicted RBP12.32□□□□□ -0.44
CACNA1C-210ENST00000399606 IL16Q14005 1332 aa12.32□□□□□ -0.44
CACNA1C-210ENST00000399606 PRIM1P49642 420 aaKnown RBP12.32□□□□□ -0.44
CACNA1C-210ENST00000399606 TMEM57Q8N5G2 664 aa12.32□□□□□ -0.44
CACNA1C-210ENST00000399606 LBHD1Q9BQE6 289 aaPredicted RBP12.32□□□□□ -0.44
CACNA1C-210ENST00000399606 SYNDIG1Q9H7V2 258 aa12.32□□□□□ -0.44
CACNA1C-210ENST00000399606 POLIQ9UNA4 740 aa12.32□□□□□ -0.44
CACNA1C-210ENST00000399606 SHANK2Q9UPX8 1470 aa12.32□□□□□ -0.44
CACNA1C-210ENST00000399606 RYBPQ8N488 228 aaPredicted RBP12.31□□□□□ -0.44
CACNA1C-210ENST00000399606 MORC4Q8TE76 937 aa12.31□□□□□ -0.44
CACNA1C-210ENST00000399606 ZBTB43O43298 467 aa12.31□□□□□ -0.44
CACNA1C-210ENST00000399606 GMNNO75496 209 aa12.31□□□□□ -0.44
CACNA1C-210ENST00000399606 ARPP19P56211 112 aa12.31□□□□□ -0.44
CACNA1C-210ENST00000399606 SFMBT1Q9UHJ3 866 aa12.31□□□□□ -0.44
CACNA1C-210ENST00000399606 RAD50Q92878 1312 aa12.31□□□□□ -0.44
CACNA1C-210ENST00000399606 IRX5P78411 483 aaPredicted RBP12.31□□□□□ -0.44
CACNA1C-210ENST00000399606 ZBTB16Q05516 673 aa12.31□□□□□ -0.44
CACNA1C-210ENST00000399606 RRAGBQ5VZM2 374 aa12.31□□□□□ -0.44
CACNA1C-210ENST00000399606 CEP57Q86XR8 500 aa12.31□□□□□ -0.44
CACNA1C-210ENST00000399606 WDR66Q8TBY9 1149 aa12.31□□□□□ -0.44
CACNA1C-210ENST00000399606 SPATA17Q96L03 361 aa12.31□□□□□ -0.44
CACNA1C-210ENST00000399606 GCNAQ96QF7 691 aa12.31□□□□□ -0.44
CACNA1C-210ENST00000399606 PLEKHG3A1L390 1219 aa12.31□□□□□ -0.44
CACNA1C-210ENST00000399606 PLCB4Q15147 1175 aa12.31□□□□□ -0.44
CACNA1C-210ENST00000399606 BIN1O00499 593 aa12.31□□□□□ -0.44
CACNA1C-210ENST00000399606 CTAGE5O15320 804 aa12.31□□□□□ -0.44
CACNA1C-210ENST00000399606 CCT6AP40227 531 aaKnown RBP12.31□□□□□ -0.44
CACNA1C-210ENST00000399606 ARHGEF16Q5VV41 709 aa12.31□□□□□ -0.44
CACNA1C-210ENST00000399606 GBP7Q8N8V2 638 aaPredicted RBP12.31□□□□□ -0.44
CACNA1C-210ENST00000399606 DENND2AQ9ULE3 1009 aa12.31□□□□□ -0.44
CACNA1C-210ENST00000399606 FOXD4Q12950 439 aaPredicted RBP12.3□□□□□ -0.44
CACNA1C-210ENST00000399606 CCDC170Q8IYT3 715 aa12.3□□□□□ -0.44
CACNA1C-210ENST00000399606 ITM2BQ9Y287 266 aa12.3□□□□□ -0.44
CACNA1C-210ENST00000399606 DKC1O60832 514 aaKnown RBP eCLIP12.3□□□□□ -0.44
CACNA1C-210ENST00000399606 HCLS1P14317 486 aaPredicted RBP12.3□□□□□ -0.44
CACNA1C-210ENST00000399606 LMBR1LQ6UX01 489 aa12.3□□□□□ -0.44
CACNA1C-210ENST00000399606 C2orf69Q8N8R5 385 aa12.3□□□□□ -0.44
CACNA1C-210ENST00000399606 ZHX1Q9UKY1 873 aaPredicted RBP12.3□□□□□ -0.44
CACNA1C-210ENST00000399606 CTTNBP2Q8WZ74 1663 aa12.3□□□□□ -0.44
CACNA1C-210ENST00000399606 BICDL2A1A5D9 508 aa12.3□□□□□ -0.44
CACNA1C-210ENST00000399606 VIMP08670 466 aaKnown RBP12.3□□□□□ -0.44
CACNA1C-210ENST00000399606 DOK7Q18PE1 504 aa12.3□□□□□ -0.44
CACNA1C-210ENST00000399606 TMC6Q7Z403 805 aa12.3□□□□□ -0.44
CACNA1C-210ENST00000399606 TBC1D31Q96DN5 1066 aa12.3□□□□□ -0.44
CACNA1C-210ENST00000399606 SCAF11Q99590 1463 aaKnown RBP12.3□□□□□ -0.44
CACNA1C-210ENST00000399606 NEMFO60524 1076 aa12.3□□□□□ -0.44
CACNA1C-210ENST00000399606 SARNPP82979 210 aaKnown RBP12.3□□□□□ -0.44
CACNA1C-210ENST00000399606 RPS6KC1Q96S38 1066 aa12.3□□□□□ -0.44
CACNA1C-210ENST00000399606 RMND1Q9NWS8 449 aa12.3□□□□□ -0.44
CACNA1C-210ENST00000399606 GSDMDP57764 484 aa12.3□□□□□ -0.44
CACNA1C-210ENST00000399606 DDX27Q96GQ7 796 aaKnown RBP12.3□□□□□ -0.44
CACNA1C-210ENST00000399606 APOL6Q9BWW8 343 aa12.3□□□□□ -0.44
CACNA1C-210ENST00000399606 JADE2Q9NQC1 790 aa12.3□□□□□ -0.44
CACNA1C-210ENST00000399606 ZKSCAN5Q9Y2L8 839 aa12.3□□□□□ -0.44
CACNA1C-210ENST00000399606 KLF18A0A0U1RQI7 1052 aa12.29□□□□□ -0.44
CACNA1C-210ENST00000399606 ZRANB2O95218 330 aaKnown RBP eCLIP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms