RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 TNNI3KQ59H18 835 aa18.32■□□□□ 0.52
SMIM11A-203ENST00000399299 CDC42EP5Q6NZY7 148 aa18.32■□□□□ 0.52
SMIM11A-203ENST00000399299 SLF2Q8IX21 1173 aa18.32■□□□□ 0.52
SMIM11A-203ENST00000399299 WNK4Q96J92 1243 aa18.32■□□□□ 0.52
SMIM11A-203ENST00000399299 HMG20BQ9P0W2 317 aa18.32■□□□□ 0.52
SMIM11A-203ENST00000399299 FPGT-TNNI3KV9GXZ4 949 aa18.32■□□□□ 0.52
SMIM11A-203ENST00000399299 MANSC4A6NHS7 340 aaPredicted RBP18.31■□□□□ 0.52
SMIM11A-203ENST00000399299 UQCRFS1P1P0C7P4 283 aa18.31■□□□□ 0.52
SMIM11A-203ENST00000399299 INHBEP58166 350 aa18.31■□□□□ 0.52
SMIM11A-203ENST00000399299 DZIP1Q86YF9 867 aaKnown RBP18.31■□□□□ 0.52
SMIM11A-203ENST00000399299 SPATA5Q8NB90 893 aa18.31■□□□□ 0.52
SMIM11A-203ENST00000399299 FAM163AQ96GL9 167 aaPredicted RBP18.31■□□□□ 0.52
SMIM11A-203ENST00000399299 ABCF2Q9UG63 623 aa18.31■□□□□ 0.52
SMIM11A-203ENST00000399299 DDX19BQ9UMR2 479 aa18.31■□□□□ 0.52
SMIM11A-203ENST00000399299 MKRN3Q13064 507 aaKnown RBP18.3■□□□□ 0.52
SMIM11A-203ENST00000399299 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.3■□□□□ 0.52
SMIM11A-203ENST00000399299 FAM151AQ8WW52 585 aa18.3■□□□□ 0.52
SMIM11A-203ENST00000399299 CFHR5Q9BXR6 569 aa18.3■□□□□ 0.52
SMIM11A-203ENST00000399299 MCAMP43121 646 aa18.29■□□□□ 0.52
SMIM11A-203ENST00000399299 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.29■□□□□ 0.52
SMIM11A-203ENST00000399299 ERICH6Q7L0X2 663 aa18.29■□□□□ 0.52
SMIM11A-203ENST00000399299 CHMP4BQ9H444 224 aaKnown RBP18.29■□□□□ 0.52
SMIM11A-203ENST00000399299 MAST2Q6P0Q8 1798 aa18.29■□□□□ 0.52
SMIM11A-203ENST00000399299 RFX7Q2KHR2 1363 aa18.29■□□□□ 0.52
SMIM11A-203ENST00000399299 DOCK2Q92608 1830 aa18.28■□□□□ 0.52
SMIM11A-203ENST00000399299 MROH7-TTC4A0A0A0MT08 1334 aa18.28■□□□□ 0.52
SMIM11A-203ENST00000399299 AK9Q5TCS8 1911 aa18.28■□□□□ 0.52
SMIM11A-203ENST00000399299 ALDH1A1P00352 501 aa18.28■□□□□ 0.52
SMIM11A-203ENST00000399299 MAP3K9P80192 1104 aa18.28■□□□□ 0.52
SMIM11A-203ENST00000399299 NOM1Q5C9Z4 860 aaKnown RBP18.28■□□□□ 0.52
SMIM11A-203ENST00000399299 CCDC158Q5M9N0 1113 aa18.28■□□□□ 0.52
SMIM11A-203ENST00000399299 DCAF15Q66K64 600 aa18.28■□□□□ 0.52
SMIM11A-203ENST00000399299 PI16Q6UXB8 463 aa18.28■□□□□ 0.52
SMIM11A-203ENST00000399299 ERC1Q8IUD2 1116 aa18.28■□□□□ 0.52
SMIM11A-203ENST00000399299 ZNF512BQ96KM6 892 aaPredicted RBP18.28■□□□□ 0.52
SMIM11A-203ENST00000399299 DBNDD2Q9BQY9 259 aa18.28■□□□□ 0.52
SMIM11A-203ENST00000399299 ZBTB40Q9NUA8 1239 aa18.28■□□□□ 0.52
SMIM11A-203ENST00000399299 USP40Q9NVE5 1235 aa18.28■□□□□ 0.52
SMIM11A-203ENST00000399299 FAM198AQ9UFP1 575 aa18.28■□□□□ 0.52
SMIM11A-203ENST00000399299 COG6Q9Y2V7 657 aa18.28■□□□□ 0.52
SMIM11A-203ENST00000399299 GJA5P36382 358 aa18.27■□□□□ 0.52
SMIM11A-203ENST00000399299 MECOMQ03112 1051 aa18.27■□□□□ 0.52
SMIM11A-203ENST00000399299 NFIAQ12857 509 aa18.27■□□□□ 0.52
SMIM11A-203ENST00000399299 VGLL4Q14135 290 aa18.27■□□□□ 0.52
SMIM11A-203ENST00000399299 PDE3AQ14432 1141 aa18.27■□□□□ 0.52
SMIM11A-203ENST00000399299 TTC39AQ5SRH9 613 aa18.27■□□□□ 0.52
SMIM11A-203ENST00000399299 IDI2Q9BXS1 227 aa18.27■□□□□ 0.52
SMIM11A-203ENST00000399299 ELP3Q9H9T3 547 aa18.27■□□□□ 0.52
SMIM11A-203ENST00000399299 CSADQ9Y600 493 aa18.27■□□□□ 0.52
SMIM11A-203ENST00000399299 IGSF3O75054 1194 aa18.26■□□□□ 0.51
SMIM11A-203ENST00000399299 GSTO1P78417 241 aa18.26■□□□□ 0.51
SMIM11A-203ENST00000399299 HSP90AB4PQ58FF6 505 aa18.26■□□□□ 0.51
SMIM11A-203ENST00000399299 RPAP2Q8IXW5 612 aaPredicted RBP18.26■□□□□ 0.51
SMIM11A-203ENST00000399299 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.26■□□□□ 0.51
SMIM11A-203ENST00000399299 ZNF384Q8TF68 577 aa18.26■□□□□ 0.51
SMIM11A-203ENST00000399299 OPTNQ96CV9 577 aa18.26■□□□□ 0.51
SMIM11A-203ENST00000399299 ABHD8Q96I13 439 aa18.26■□□□□ 0.51
SMIM11A-203ENST00000399299 DBNLQ9UJU6 430 aaKnown RBP18.26■□□□□ 0.51
SMIM11A-203ENST00000399299 GPR75-ASB3A0A0A6YYF3 556 aa18.25■□□□□ 0.51
SMIM11A-203ENST00000399299 ENTPD3O75355 529 aa18.25■□□□□ 0.51
SMIM11A-203ENST00000399299 CAPN15O75808 1086 aa18.25■□□□□ 0.51
SMIM11A-203ENST00000399299 MAP4K4O95819 1239 aaPredicted RBP18.25■□□□□ 0.51
SMIM11A-203ENST00000399299 LDHCP07864 332 aa18.25■□□□□ 0.51
SMIM11A-203ENST00000399299 TCP10Q12799 353 aa18.25■□□□□ 0.51
SMIM11A-203ENST00000399299 IFNL1Q8IU54 200 aa18.25■□□□□ 0.51
SMIM11A-203ENST00000399299 NSUN4Q96CB9 384 aaKnown RBP18.25■□□□□ 0.51
SMIM11A-203ENST00000399299 WRNIP1Q96S55 665 aa18.25■□□□□ 0.51
SMIM11A-203ENST00000399299 ZNF341Q9BYN7 854 aa18.25■□□□□ 0.51
SMIM11A-203ENST00000399299 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.25■□□□□ 0.51
SMIM11A-203ENST00000399299 TESPA1A2RU30 521 aaPredicted RBP18.24■□□□□ 0.51
SMIM11A-203ENST00000399299 SPDYE5A6NIY4 337 aa18.24■□□□□ 0.51
SMIM11A-203ENST00000399299 HMMRO75330 724 aa18.24■□□□□ 0.51
SMIM11A-203ENST00000399299 TBC1D8O95759 1140 aa18.24■□□□□ 0.51
SMIM11A-203ENST00000399299 BTDP43251 543 aa18.24■□□□□ 0.51
SMIM11A-203ENST00000399299 RGS3P49796 1198 aa18.24■□□□□ 0.51
SMIM11A-203ENST00000399299 TBC1D9Q6ZT07 1266 aa18.24■□□□□ 0.51
SMIM11A-203ENST00000399299 EAF2Q96CJ1 260 aaPredicted RBP18.24■□□□□ 0.51
SMIM11A-203ENST00000399299 MCOLN1Q9GZU1 580 aa18.24■□□□□ 0.51
SMIM11A-203ENST00000399299 EXOC6BQ9Y2D4 811 aa18.24■□□□□ 0.51
SMIM11A-203ENST00000399299 MYO5AQ9Y4I1 1855 aaKnown RBP18.23■□□□□ 0.51
SMIM11A-203ENST00000399299 ATRNL1Q5VV63 1379 aa18.23■□□□□ 0.51
SMIM11A-203ENST00000399299 IGF2BP3O00425 579 aaKnown RBP eCLIP18.23■□□□□ 0.51
SMIM11A-203ENST00000399299 NPM3O75607 178 aaKnown RBP18.23■□□□□ 0.51
SMIM11A-203ENST00000399299 WDHD1O75717 1129 aaPredicted RBP18.23■□□□□ 0.51
SMIM11A-203ENST00000399299 DGKZQ13574 1117 aa18.23■□□□□ 0.51
SMIM11A-203ENST00000399299 ERO1BQ86YB8 467 aa18.23■□□□□ 0.51
SMIM11A-203ENST00000399299 MS4A4AQ96JQ5 239 aa18.23■□□□□ 0.51
SMIM11A-203ENST00000399299 RAI14Q9P0K7 980 aa18.23■□□□□ 0.51
SMIM11A-203ENST00000399299 LRP2BPQ9P2M1 347 aa18.23■□□□□ 0.51
SMIM11A-203ENST00000399299 ZNF112Q9UJU3 913 aa18.23■□□□□ 0.51
SMIM11A-203ENST00000399299 SNCAIPQ9Y6H5 919 aa18.23■□□□□ 0.51
SMIM11A-203ENST00000399299 GPR25O00155 361 aa18.22■□□□□ 0.51
SMIM11A-203ENST00000399299 GTF2A2P52657 109 aa18.22■□□□□ 0.51
SMIM11A-203ENST00000399299 RHBDL3P58872 404 aa18.22■□□□□ 0.51
SMIM11A-203ENST00000399299 OTUD7BQ6GQQ9 843 aa18.22■□□□□ 0.51
SMIM11A-203ENST00000399299 MIGA2Q7L4E1 593 aa18.22■□□□□ 0.51
SMIM11A-203ENST00000399299 ZFPM1Q8IX07 1006 aa18.22■□□□□ 0.51
SMIM11A-203ENST00000399299 CNKSR2Q8WXI2 1034 aa18.22■□□□□ 0.51
SMIM11A-203ENST00000399299 CCDC8Q9H0W5 538 aaPredicted RBP18.22■□□□□ 0.51
SMIM11A-203ENST00000399299 TLR7Q9NYK1 1049 aaKnown RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms