RNA–Protein interactions for RNA: ENST00000399275.6

SMAD9-203, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMAD9, Length 5,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-203ENST00000399275 VPS52Q8N1B4 723 aa10.75□□□□□ -0.69
SMAD9-203ENST00000399275 ORC3Q9UBD5 711 aaPredicted RBP10.75□□□□□ -0.69
SMAD9-203ENST00000399275 SYNMO15061 1565 aa10.75□□□□□ -0.69
SMAD9-203ENST00000399275 RWDD2BP57060 319 aa10.75□□□□□ -0.69
SMAD9-203ENST00000399275 ACBD5Q5T8D3 534 aaPredicted RBP10.75□□□□□ -0.69
SMAD9-203ENST00000399275 TCERG1LQ5VWI1 586 aa10.75□□□□□ -0.69
SMAD9-203ENST00000399275 RMI1Q9H9A7 625 aa10.75□□□□□ -0.69
SMAD9-203ENST00000399275 DBF4Q9UBU7 674 aaPredicted RBP10.75□□□□□ -0.69
SMAD9-203ENST00000399275 SYCP2Q9BX26 1530 aa10.75□□□□□ -0.69
SMAD9-203ENST00000399275 ZBTB22O15209 634 aa10.75□□□□□ -0.69
SMAD9-203ENST00000399275 MAN1A2O60476 641 aa10.75□□□□□ -0.69
SMAD9-203ENST00000399275 IRX4P78413 519 aa10.75□□□□□ -0.69
SMAD9-203ENST00000399275 CREB3L3Q68CJ9 461 aa10.75□□□□□ -0.69
SMAD9-203ENST00000399275 MPHOSPH8Q99549 860 aa10.75□□□□□ -0.69
SMAD9-203ENST00000399275 Q9H521 79 aa10.75□□□□□ -0.69
SMAD9-203ENST00000399275 SOS1Q07889 1333 aaPredicted RBP10.74□□□□□ -0.69
SMAD9-203ENST00000399275 WDHD1O75717 1129 aaPredicted RBP10.74□□□□□ -0.69
SMAD9-203ENST00000399275 SPAG1Q07617 926 aa10.74□□□□□ -0.69
SMAD9-203ENST00000399275 SSRP1Q08945 709 aaKnown RBP10.74□□□□□ -0.69
SMAD9-203ENST00000399275 SLC4A8Q2Y0W8 1093 aa10.74□□□□□ -0.69
SMAD9-203ENST00000399275 IFT81Q8WYA0 676 aa10.74□□□□□ -0.69
SMAD9-203ENST00000399275 G3BP2Q9UN86 482 aaKnown RBP10.74□□□□□ -0.69
SMAD9-203ENST00000399275 AKAP2Q9Y2D5 859 aa10.74□□□□□ -0.69
SMAD9-203ENST00000399275 USP16Q9Y5T5 823 aa10.74□□□□□ -0.69
SMAD9-203ENST00000399275 BASP1P80723 227 aaKnown RBP10.74□□□□□ -0.69
SMAD9-203ENST00000399275 GNPTABQ3T906 1256 aa10.74□□□□□ -0.69
SMAD9-203ENST00000399275 BTN2A1Q7KYR7 527 aa10.74□□□□□ -0.69
SMAD9-203ENST00000399275 UBAC1Q9BSL1 405 aa10.74□□□□□ -0.69
SMAD9-203ENST00000399275 NKIRAS1Q9NYS0 192 aa10.74□□□□□ -0.69
SMAD9-203ENST00000399275 FBXO2Q9UK22 296 aaPredicted RBP10.74□□□□□ -0.69
SMAD9-203ENST00000399275 MSH6P52701 1360 aa10.74□□□□□ -0.69
SMAD9-203ENST00000399275 MBD5Q9P267 1494 aa10.74□□□□□ -0.69
SMAD9-203ENST00000399275 LONP1P36776 959 aaKnown RBP10.74□□□□□ -0.69
SMAD9-203ENST00000399275 GNGT1P63211 74 aa10.74□□□□□ -0.69
SMAD9-203ENST00000399275 ARIH1Q9Y4X5 557 aaPredicted RBP10.74□□□□□ -0.69
SMAD9-203ENST00000399275 EIF4G3O43432 1585 aaKnown RBP10.74□□□□□ -0.69
SMAD9-203ENST00000399275 POLR3DP05423 398 aaPredicted RBP10.74□□□□□ -0.69
SMAD9-203ENST00000399275 CFAP157Q5JU67 520 aa10.74□□□□□ -0.69
SMAD9-203ENST00000399275 NUTM2GQ5VZR2 741 aa10.74□□□□□ -0.69
SMAD9-203ENST00000399275 Q6ZUG5 572 aa10.74□□□□□ -0.69
SMAD9-203ENST00000399275 TRIML1Q8N9V2 468 aa10.74□□□□□ -0.69
SMAD9-203ENST00000399275 CARD6Q9BX69 1037 aa10.74□□□□□ -0.69
SMAD9-203ENST00000399275 SNX14Q9Y5W7 946 aa10.74□□□□□ -0.69
SMAD9-203ENST00000399275 KDM5AP29375 1690 aaKnown RBP10.73□□□□□ -0.69
SMAD9-203ENST00000399275 SPTLC2O15270 562 aa10.73□□□□□ -0.69
SMAD9-203ENST00000399275 GSPT1P15170 499 aaKnown RBP10.73□□□□□ -0.69
SMAD9-203ENST00000399275 CCT5P48643 541 aa10.73□□□□□ -0.69
SMAD9-203ENST00000399275 CLEC17AQ6ZS10 378 aa10.73□□□□□ -0.69
SMAD9-203ENST00000399275 RASAL2Q9UJF2 1139 aa10.73□□□□□ -0.69
SMAD9-203ENST00000399275 ZNF213O14771 459 aa10.73□□□□□ -0.69
SMAD9-203ENST00000399275 ATP8B1O43520 1251 aa10.73□□□□□ -0.69
SMAD9-203ENST00000399275 MX2P20592 715 aa10.73□□□□□ -0.69
SMAD9-203ENST00000399275 CDC25BP30305 580 aa10.73□□□□□ -0.69
SMAD9-203ENST00000399275 TAF11Q15544 211 aa10.73□□□□□ -0.69
SMAD9-203ENST00000399275 CCDC144CPQ8IYA2 1237 aa10.73□□□□□ -0.69
SMAD9-203ENST00000399275 MYO1BO43795 1136 aa10.73□□□□□ -0.69
SMAD9-203ENST00000399275 FGFR1OPO95684 399 aaKnown RBP10.73□□□□□ -0.69
SMAD9-203ENST00000399275 IFIT1P09914 478 aaKnown RBP10.73□□□□□ -0.69
SMAD9-203ENST00000399275 CHMP4BP1P59074 171 aa10.73□□□□□ -0.69
SMAD9-203ENST00000399275 PLCB1Q9NQ66 1216 aa10.73□□□□□ -0.69
SMAD9-203ENST00000399275 GNL3LQ9NVN8 582 aaKnown RBP10.73□□□□□ -0.69
SMAD9-203ENST00000399275 RGS12O14924 1447 aa10.73□□□□□ -0.69
SMAD9-203ENST00000399275 ABCC4O15439 1325 aa10.73□□□□□ -0.69
SMAD9-203ENST00000399275 KDM5BQ9UGL1 1544 aa10.73□□□□□ -0.69
SMAD9-203ENST00000399275 LMOD1P29536 600 aaPredicted RBP10.73□□□□□ -0.69
SMAD9-203ENST00000399275 CCDC62Q6P9F0 684 aa10.73□□□□□ -0.69
SMAD9-203ENST00000399275 BRAPQ7Z569 592 aa10.73□□□□□ -0.69
SMAD9-203ENST00000399275 CCDC63Q8NA47 563 aa10.73□□□□□ -0.69
SMAD9-203ENST00000399275 DACT3Q96B18 629 aaPredicted RBP10.73□□□□□ -0.69
SMAD9-203ENST00000399275 PDLIM2Q96JY6 352 aa10.73□□□□□ -0.69
SMAD9-203ENST00000399275 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.73□□□□□ -0.69
SMAD9-203ENST00000399275 UTP14AQ9BVJ6 771 aaKnown RBP10.73□□□□□ -0.69
SMAD9-203ENST00000399275 WASLO00401 505 aaPredicted RBP10.72□□□□□ -0.69
SMAD9-203ENST00000399275 NOP2P46087 812 aaKnown RBP10.72□□□□□ -0.69
SMAD9-203ENST00000399275 ATP2B2Q01814 1243 aa10.72□□□□□ -0.69
SMAD9-203ENST00000399275 DEUP1Q05D60 604 aa10.72□□□□□ -0.69
SMAD9-203ENST00000399275 CAPRIN2Q6IMN6 1127 aaKnown RBP10.72□□□□□ -0.69
SMAD9-203ENST00000399275 CAPZA3Q96KX2 299 aa10.72□□□□□ -0.69
SMAD9-203ENST00000399275 SPZ1Q9BXG8 430 aa10.72□□□□□ -0.69
SMAD9-203ENST00000399275 MAST1Q9Y2H9 1570 aa10.72□□□□□ -0.69
SMAD9-203ENST00000399275 HGSO14964 777 aaPredicted RBP10.72□□□□□ -0.69
SMAD9-203ENST00000399275 PSMD6Q15008 389 aa10.72□□□□□ -0.69
SMAD9-203ENST00000399275 FYB2Q5VWT5 728 aa10.72□□□□□ -0.69
SMAD9-203ENST00000399275 GPR161Q8N6U8 529 aaKnown RBP10.72□□□□□ -0.69
SMAD9-203ENST00000399275 CEP70Q8NHQ1 597 aa10.72□□□□□ -0.69
SMAD9-203ENST00000399275 OTUD7AQ8TE49 926 aaPredicted RBP10.72□□□□□ -0.69
SMAD9-203ENST00000399275 SELENOOQ9BVL4 669 aa10.72□□□□□ -0.69
SMAD9-203ENST00000399275 KRT75O95678 551 aa10.72□□□□□ -0.69
SMAD9-203ENST00000399275 CYLC1P35663 651 aaPredicted RBP10.72□□□□□ -0.69
SMAD9-203ENST00000399275 MYL5Q02045 173 aa10.72□□□□□ -0.69
SMAD9-203ENST00000399275 RAD51AP2Q09MP3 1159 aa10.72□□□□□ -0.69
SMAD9-203ENST00000399275 ZNF569Q5MCW4 686 aa10.72□□□□□ -0.69
SMAD9-203ENST00000399275 PRPF38AQ8NAV1 312 aaKnown RBP10.72□□□□□ -0.69
SMAD9-203ENST00000399275 CNNM1Q9NRU3 951 aa10.72□□□□□ -0.69
SMAD9-203ENST00000399275 IFI16Q16666 785 aaKnown RBP10.72□□□□□ -0.69
SMAD9-203ENST00000399275 KIF6Q6ZMV9 814 aa10.72□□□□□ -0.69
SMAD9-203ENST00000399275 LEO1Q8WVC0 666 aaPredicted RBP10.72□□□□□ -0.69
SMAD9-203ENST00000399275 LLPHQ9BRT6 129 aaKnown RBP10.72□□□□□ -0.69
SMAD9-203ENST00000399275 DDX21Q9NR30 783 aaKnown RBP eCLIP10.72□□□□□ -0.69
SMAD9-203ENST00000399275 hCG_2014768A0A024R1R8 64 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms