RNA–Protein interactions for RNA: ENST00000398604.2

PCDHGA8-201, Transcript of protocadherin gamma subfamily A, 8, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA8, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8-201ENST00000398604 FAM107BQ9H098 131 aa13.11□□□□□ -0.31
PCDHGA8-201ENST00000398604 QRICH2Q9H0J4 1663 aa13.11□□□□□ -0.31
PCDHGA8-201ENST00000398604 GOLGA6L7A0A1B0GV03 622 aa13.11□□□□□ -0.31
PCDHGA8-201ENST00000398604 SKILP12757 684 aa13.11□□□□□ -0.31
PCDHGA8-201ENST00000398604 CPXCR1Q8N123 301 aa13.11□□□□□ -0.31
PCDHGA8-201ENST00000398604 RRP36Q96EU6 259 aaKnown RBP13.11□□□□□ -0.31
PCDHGA8-201ENST00000398604 RICTORQ6R327 1708 aa13.1□□□□□ -0.31
PCDHGA8-201ENST00000398604 A0A1B0GVL5 298 aa13.1□□□□□ -0.31
PCDHGA8-201ENST00000398604 HARSP12081 509 aaKnown RBP13.1□□□□□ -0.31
PCDHGA8-201ENST00000398604 GSDMDP57764 484 aa13.1□□□□□ -0.31
PCDHGA8-201ENST00000398604 MRVI1Q9Y6F6 885 aa13.1□□□□□ -0.31
PCDHGA8-201ENST00000398604 PREX1Q8TCU6 1659 aa13.1□□□□□ -0.31
PCDHGA8-201ENST00000398604 MAP2K1Q02750 393 aaPredicted RBP13.1□□□□□ -0.31
PCDHGA8-201ENST00000398604 GBP3Q9H0R5 595 aa13.1□□□□□ -0.31
PCDHGA8-201ENST00000398604 MAPK8IP1Q9UQF2 711 aa13.1□□□□□ -0.31
PCDHGA8-201ENST00000398604 TTC41PQ6P2S7 1318 aa13.1□□□□□ -0.31
PCDHGA8-201ENST00000398604 VWA3AA6NCI4 1184 aa13.1□□□□□ -0.31
PCDHGA8-201ENST00000398604 ERCC3P19447 782 aa13.1□□□□□ -0.31
PCDHGA8-201ENST00000398604 TERF1P54274 439 aa13.1□□□□□ -0.31
PCDHGA8-201ENST00000398604 PLBD2Q8NHP8 589 aa13.1□□□□□ -0.31
PCDHGA8-201ENST00000398604 XAGE2Q96GT9 111 aa13.1□□□□□ -0.31
PCDHGA8-201ENST00000398604 EYA3Q99504 573 aa13.1□□□□□ -0.31
PCDHGA8-201ENST00000398604 AATFQ9NY61 560 aaKnown RBP eCLIP13.1□□□□□ -0.31
PCDHGA8-201ENST00000398604 DNAI1Q9UI46 699 aa13.1□□□□□ -0.31
PCDHGA8-201ENST00000398604 CCDC171Q6TFL3 1326 aa13.1□□□□□ -0.31
PCDHGA8-201ENST00000398604 ADGRB1O14514 1584 aa13.1□□□□□ -0.31
PCDHGA8-201ENST00000398604 PLCG2P16885 1265 aa13.09□□□□□ -0.31
PCDHGA8-201ENST00000398604 FAM182BQ5T319 152 aa13.09□□□□□ -0.31
PCDHGA8-201ENST00000398604 TTC6Q86TZ1 520 aa13.09□□□□□ -0.31
PCDHGA8-201ENST00000398604 METTL22Q9BUU2 404 aaPredicted RBP13.09□□□□□ -0.31
PCDHGA8-201ENST00000398604 RIMS1Q86UR5 1692 aaKnown RBP13.09□□□□□ -0.31
PCDHGA8-201ENST00000398604 NEXMIFQ5QGS0 1516 aa13.09□□□□□ -0.31
PCDHGA8-201ENST00000398604 CEP170BQ9Y4F5 1589 aaPredicted RBP13.09□□□□□ -0.31
PCDHGA8-201ENST00000398604 PIK3C2BO00750 1634 aa13.09□□□□□ -0.31
PCDHGA8-201ENST00000398604 MSL1Q68DK7 614 aa13.09□□□□□ -0.31
PCDHGA8-201ENST00000398604 FAM114A1Q8IWE2 563 aa13.09□□□□□ -0.31
PCDHGA8-201ENST00000398604 ALS2CR12Q96Q35 445 aa13.09□□□□□ -0.31
PCDHGA8-201ENST00000398604 DNAI2Q9GZS0 605 aa13.09□□□□□ -0.31
PCDHGA8-201ENST00000398604 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.09□□□□□ -0.31
PCDHGA8-201ENST00000398604 V9GY48 417 aaPredicted RBP13.09□□□□□ -0.31
PCDHGA8-201ENST00000398604 V9GYY5 206 aaPredicted RBP13.09□□□□□ -0.31
PCDHGA8-201ENST00000398604 KRT13P13646 458 aa13.09□□□□□ -0.31
PCDHGA8-201ENST00000398604 SYT1P21579 422 aa13.09□□□□□ -0.31
PCDHGA8-201ENST00000398604 MAP3K9P80192 1104 aa13.09□□□□□ -0.31
PCDHGA8-201ENST00000398604 GPIHBP1Q8IV16 184 aa13.09□□□□□ -0.31
PCDHGA8-201ENST00000398604 SUCLG2Q96I99 432 aa13.09□□□□□ -0.31
PCDHGA8-201ENST00000398604 USP26Q9BXU7 913 aa13.09□□□□□ -0.31
PCDHGA8-201ENST00000398604 ANKRD2Q9GZV1 360 aa13.09□□□□□ -0.31
PCDHGA8-201ENST00000398604 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.09□□□□□ -0.31
PCDHGA8-201ENST00000398604 HOXB7P09629 217 aa13.09□□□□□ -0.31
PCDHGA8-201ENST00000398604 CALML3P27482 149 aa13.09□□□□□ -0.31
PCDHGA8-201ENST00000398604 ARHGEF25Q86VW2 580 aa13.09□□□□□ -0.31
PCDHGA8-201ENST00000398604 TNNI3KQ59H18 835 aa13.08□□□□□ -0.31
PCDHGA8-201ENST00000398604 ZNF354CQ86Y25 554 aa13.08□□□□□ -0.31
PCDHGA8-201ENST00000398604 LARGE2Q8N3Y3 721 aa13.08□□□□□ -0.31
PCDHGA8-201ENST00000398604 BIN2Q9UBW5 565 aaPredicted RBP13.08□□□□□ -0.31
PCDHGA8-201ENST00000398604 FPGT-TNNI3KV9GXZ4 949 aa13.08□□□□□ -0.31
PCDHGA8-201ENST00000398604 LRSAM1Q6UWE0 723 aa13.08□□□□□ -0.32
PCDHGA8-201ENST00000398604 PLEKHF1Q96S99 279 aa13.08□□□□□ -0.32
PCDHGA8-201ENST00000398604 USP19O94966 1318 aa13.08□□□□□ -0.32
PCDHGA8-201ENST00000398604 CHMP2AO43633 222 aa13.08□□□□□ -0.32
PCDHGA8-201ENST00000398604 GNAT2P19087 354 aa13.08□□□□□ -0.32
PCDHGA8-201ENST00000398604 ACTN2P35609 894 aa13.08□□□□□ -0.32
PCDHGA8-201ENST00000398604 DTHD1Q6ZMT9 781 aa13.08□□□□□ -0.32
PCDHGA8-201ENST00000398604 NCOA3Q9Y6Q9 1424 aa13.08□□□□□ -0.32
PCDHGA8-201ENST00000398604 TULP4Q9NRJ4 1543 aa13.08□□□□□ -0.32
PCDHGA8-201ENST00000398604 CHL1O00533 1208 aa13.08□□□□□ -0.32
PCDHGA8-201ENST00000398604 GPAA1O43292 621 aa13.08□□□□□ -0.32
PCDHGA8-201ENST00000398604 BMP15O95972 392 aa13.08□□□□□ -0.32
PCDHGA8-201ENST00000398604 FAM200AQ8TCP9 573 aa13.08□□□□□ -0.32
PCDHGA8-201ENST00000398604 LRRC27Q9C0I9 530 aa13.07□□□□□ -0.32
PCDHGA8-201ENST00000398604 RMND1Q9NWS8 449 aa13.07□□□□□ -0.32
PCDHGA8-201ENST00000398604 STK32BQ9NY57 414 aa13.07□□□□□ -0.32
PCDHGA8-201ENST00000398604 APBA3O96018 575 aa13.07□□□□□ -0.32
PCDHGA8-201ENST00000398604 TRAF1Q13077 416 aa13.07□□□□□ -0.32
PCDHGA8-201ENST00000398604 BRINP3Q76B58 766 aa13.07□□□□□ -0.32
PCDHGA8-201ENST00000398604 PYM1Q9BRP8 204 aaKnown RBP13.07□□□□□ -0.32
PCDHGA8-201ENST00000398604 WDR70Q9NW82 654 aa13.07□□□□□ -0.32
PCDHGA8-201ENST00000398604 GNA11P29992 359 aa13.07□□□□□ -0.32
PCDHGA8-201ENST00000398604 KCNQ4P56696 695 aa13.07□□□□□ -0.32
PCDHGA8-201ENST00000398604 PLCB3Q01970 1234 aa13.07□□□□□ -0.32
PCDHGA8-201ENST00000398604 MAP9Q49MG5 647 aa13.07□□□□□ -0.32
PCDHGA8-201ENST00000398604 HS2ST1Q7LGA3 356 aa13.07□□□□□ -0.32
PCDHGA8-201ENST00000398604 MAATS1Q7Z4T9 603 aa13.07□□□□□ -0.32
PCDHGA8-201ENST00000398604 MPHOSPH6Q99547 160 aaKnown RBP13.07□□□□□ -0.32
PCDHGA8-201ENST00000398604 USP21Q9UK80 565 aa13.07□□□□□ -0.32
PCDHGA8-201ENST00000398604 RUFY3Q7L099 469 aa13.06□□□□□ -0.32
PCDHGA8-201ENST00000398604 MAEAQ7L5Y9 396 aa13.06□□□□□ -0.32
PCDHGA8-201ENST00000398604 DIP2AQ14689 1571 aa13.06□□□□□ -0.32
PCDHGA8-201ENST00000398604 PDE8AO60658 829 aa13.06□□□□□ -0.32
PCDHGA8-201ENST00000398604 FAM13AO94988 1023 aa13.06□□□□□ -0.32
PCDHGA8-201ENST00000398604 KIAA0753Q2KHM9 967 aa13.06□□□□□ -0.32
PCDHGA8-201ENST00000398604 DPP8Q6V1X1 898 aaPredicted RBP13.06□□□□□ -0.32
PCDHGA8-201ENST00000398604 MAPKAPK5Q8IW41 473 aa13.06□□□□□ -0.32
PCDHGA8-201ENST00000398604 SLC52A2Q9HAB3 445 aa13.06□□□□□ -0.32
PCDHGA8-201ENST00000398604 GGA1Q9UJY5 639 aa13.06□□□□□ -0.32
PCDHGA8-201ENST00000398604 SPATA31A3Q5VYP0 1347 aa13.06□□□□□ -0.32
PCDHGA8-201ENST00000398604 FAM170AA1A519 330 aa13.06□□□□□ -0.32
PCDHGA8-201ENST00000398604 DENND2AQ9ULE3 1009 aa13.06□□□□□ -0.32
PCDHGA8-201ENST00000398604 KRT2P35908 639 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms