RNA–Protein interactions for RNA: ENST00000398316.7

FNDC3A-202, Transcript of fibronectin type III domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene FNDC3A, Length 5,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-202ENST00000398316 BTNL9Q6UXG8 535 aa4.44□□□□□ -1.7
FNDC3A-202ENST00000398316 USP50Q70EL3 339 aaPredicted RBP4.44□□□□□ -1.7
FNDC3A-202ENST00000398316 C2CD5Q86YS7 1000 aa4.44□□□□□ -1.7
FNDC3A-202ENST00000398316 REM2Q8IYK8 340 aaPredicted RBP4.44□□□□□ -1.7
FNDC3A-202ENST00000398316 TANGO6Q9C0B7 1094 aa4.44□□□□□ -1.7
FNDC3A-202ENST00000398316 ZSWIM6Q9HCJ5 1215 aa4.44□□□□□ -1.7
FNDC3A-202ENST00000398316 POTECB2RU33 542 aa4.43□□□□□ -1.7
FNDC3A-202ENST00000398316 ATP2A1O14983 1001 aa4.43□□□□□ -1.7
FNDC3A-202ENST00000398316 ANXA1P04083 346 aa4.43□□□□□ -1.7
FNDC3A-202ENST00000398316 BRD2P25440 801 aaKnown RBP4.43□□□□□ -1.7
FNDC3A-202ENST00000398316 INTS4Q96HW7 963 aaKnown RBP4.43□□□□□ -1.7
FNDC3A-202ENST00000398316 PUS3Q9BZE2 481 aaKnown RBP4.43□□□□□ -1.7
FNDC3A-202ENST00000398316 CEP126Q9P2H0 1117 aa4.43□□□□□ -1.7
FNDC3A-202ENST00000398316 DPEP1P16444 411 aa4.43□□□□□ -1.7
FNDC3A-202ENST00000398316 LIFRP42702 1097 aa4.43□□□□□ -1.7
FNDC3A-202ENST00000398316 C16orf86Q6ZW13 317 aa4.43□□□□□ -1.7
FNDC3A-202ENST00000398316 PAG1Q9NWQ8 432 aa4.43□□□□□ -1.7
FNDC3A-202ENST00000398316 SWAP70Q9UH65 585 aa4.43□□□□□ -1.7
FNDC3A-202ENST00000398316 WWC3Q9ULE0 1092 aa4.43□□□□□ -1.7
FNDC3A-202ENST00000398316 SEC31BQ9NQW1 1179 aa4.43□□□□□ -1.7
FNDC3A-202ENST00000398316 LMNB1P20700 586 aa4.43□□□□□ -1.7
FNDC3A-202ENST00000398316 DALRD3Q5D0E6 543 aaKnown RBP4.43□□□□□ -1.7
FNDC3A-202ENST00000398316 APOBEC3HQ6NTF7 200 aaKnown RBP4.43□□□□□ -1.7
FNDC3A-202ENST00000398316 CNTROBQ8N137 903 aa4.43□□□□□ -1.7
FNDC3A-202ENST00000398316 CERS5Q8N5B7 392 aa4.43□□□□□ -1.7
FNDC3A-202ENST00000398316 MCM2P49736 904 aa4.43□□□□□ -1.7
FNDC3A-202ENST00000398316 ORC2Q13416 577 aaPredicted RBP4.43□□□□□ -1.7
FNDC3A-202ENST00000398316 GMCL1P1Q8NEA9 526 aa4.43□□□□□ -1.7
FNDC3A-202ENST00000398316 DHX36Q9H2U1 1008 aaKnown RBP4.43□□□□□ -1.7
FNDC3A-202ENST00000398316 PALD1Q9ULE6 856 aa4.43□□□□□ -1.7
FNDC3A-202ENST00000398316 hCG_1984214I3L0E3 225 aa4.42□□□□□ -1.7
FNDC3A-202ENST00000398316 HMGB1P09429 215 aaKnown RBP4.42□□□□□ -1.7
FNDC3A-202ENST00000398316 CCDC96Q2M329 555 aa4.42□□□□□ -1.7
FNDC3A-202ENST00000398316 MB21D2Q8IYB1 491 aaPredicted RBP4.42□□□□□ -1.7
FNDC3A-202ENST00000398316 ZNF713Q8N859 430 aaPredicted RBP4.42□□□□□ -1.7
FNDC3A-202ENST00000398316 GNL3LQ9NVN8 582 aaKnown RBP4.42□□□□□ -1.7
FNDC3A-202ENST00000398316 ARPP21Q9UBL0 812 aaPredicted RBP4.42□□□□□ -1.7
FNDC3A-202ENST00000398316 ATP5J2-PTCD1G3V325 749 aa4.42□□□□□ -1.7
FNDC3A-202ENST00000398316 HIBADHP31937 336 aaKnown RBP4.42□□□□□ -1.7
FNDC3A-202ENST00000398316 SEC23AQ15436 765 aa4.42□□□□□ -1.7
FNDC3A-202ENST00000398316 MCMDC2Q4G0Z9 681 aa4.42□□□□□ -1.7
FNDC3A-202ENST00000398316 SYNE4Q8N205 404 aa4.42□□□□□ -1.7
FNDC3A-202ENST00000398316 WDR18Q9BV38 432 aa4.42□□□□□ -1.7
FNDC3A-202ENST00000398316 OSBPL5Q9H0X9 879 aaPredicted RBP4.42□□□□□ -1.7
FNDC3A-202ENST00000398316 PIH1D3Q9NQM4 214 aaKnown RBP4.42□□□□□ -1.7
FNDC3A-202ENST00000398316 SAGE1Q9NXZ1 904 aa4.42□□□□□ -1.7
FNDC3A-202ENST00000398316 ZNFX1Q9P2E3 1918 aaKnown RBP4.42□□□□□ -1.7
FNDC3A-202ENST00000398316 PHF20L1A8MW92 1017 aa4.42□□□□□ -1.7
FNDC3A-202ENST00000398316 LDHAL6AQ6ZMR3 332 aa4.42□□□□□ -1.7
FNDC3A-202ENST00000398316 MPNDQ8N594 471 aa4.42□□□□□ -1.7
FNDC3A-202ENST00000398316 TLR7Q9NYK1 1049 aaKnown RBP4.42□□□□□ -1.7
FNDC3A-202ENST00000398316 HERC5Q9UII4 1024 aaKnown RBP4.42□□□□□ -1.7
FNDC3A-202ENST00000398316 LAS1LQ9Y4W2 734 aaKnown RBP4.42□□□□□ -1.7
FNDC3A-202ENST00000398316 U3KPZ7 1027 aaPredicted RBP4.42□□□□□ -1.7
FNDC3A-202ENST00000398316 PTMSP20962 102 aa4.42□□□□□ -1.7
FNDC3A-202ENST00000398316 TNIP1Q15025 636 aa4.42□□□□□ -1.7
FNDC3A-202ENST00000398316 FAM182BQ5T319 152 aa4.42□□□□□ -1.7
FNDC3A-202ENST00000398316 ELOA2Q8IYF1 753 aaPredicted RBP4.42□□□□□ -1.7
FNDC3A-202ENST00000398316 TMEM174Q8WUU8 243 aa4.42□□□□□ -1.7
FNDC3A-202ENST00000398316 DBNDD2Q9BQY9 259 aa4.42□□□□□ -1.7
FNDC3A-202ENST00000398316 PNMA2Q9UL42 364 aa4.42□□□□□ -1.7
FNDC3A-202ENST00000398316 PFASO15067 1338 aa4.41□□□□□ -1.7
FNDC3A-202ENST00000398316 USP17L3A6NCW0 530 aa4.41□□□□□ -1.7
FNDC3A-202ENST00000398316 USP17L4A6NCW7 530 aa4.41□□□□□ -1.7
FNDC3A-202ENST00000398316 PDE6AP16499 860 aa4.41□□□□□ -1.7
FNDC3A-202ENST00000398316 RBM10P98175 930 aaKnown RBP4.41□□□□□ -1.7
FNDC3A-202ENST00000398316 KRT32Q14532 448 aa4.41□□□□□ -1.7
FNDC3A-202ENST00000398316 TBC1D9Q6ZT07 1266 aa4.41□□□□□ -1.7
FNDC3A-202ENST00000398316 USP17L1Q7RTZ2 530 aa4.41□□□□□ -1.7
FNDC3A-202ENST00000398316 SMARCC2Q8TAQ2 1214 aa4.41□□□□□ -1.7
FNDC3A-202ENST00000398316 RPGRQ92834 1020 aaKnown RBP4.41□□□□□ -1.7
FNDC3A-202ENST00000398316 LLPHQ9BRT6 129 aaKnown RBP4.41□□□□□ -1.7
FNDC3A-202ENST00000398316 SYT17Q9BSW7 474 aa4.41□□□□□ -1.7
FNDC3A-202ENST00000398316 MAP3K20Q9NYL2 800 aaKnown RBP4.41□□□□□ -1.7
FNDC3A-202ENST00000398316 GSG1L2A8MUP6 293 aa4.41□□□□□ -1.7
FNDC3A-202ENST00000398316 DAGLBQ8NCG7 672 aa4.41□□□□□ -1.7
FNDC3A-202ENST00000398316 CHMP4CQ96CF2 233 aa4.41□□□□□ -1.7
FNDC3A-202ENST00000398316 SPDYE2BA6NHP3 402 aa4.41□□□□□ -1.7
FNDC3A-202ENST00000398316 SPDYE6P0CI01 402 aa4.41□□□□□ -1.7
FNDC3A-202ENST00000398316 SCARF1Q14162 830 aa4.41□□□□□ -1.7
FNDC3A-202ENST00000398316 CCDC158Q5M9N0 1113 aa4.41□□□□□ -1.7
FNDC3A-202ENST00000398316 LDLRAD1Q5T700 205 aa4.41□□□□□ -1.7
FNDC3A-202ENST00000398316 VPS53Q5VIR6 699 aa4.41□□□□□ -1.7
FNDC3A-202ENST00000398316 KCTD17Q8N5Z5 321 aa4.41□□□□□ -1.7
FNDC3A-202ENST00000398316 MORC4Q8TE76 937 aa4.41□□□□□ -1.7
FNDC3A-202ENST00000398316 RUFY2Q8WXA3 655 aa4.41□□□□□ -1.7
FNDC3A-202ENST00000398316 HOOK2Q96ED9 719 aa4.41□□□□□ -1.7
FNDC3A-202ENST00000398316 KCNH4Q9UQ05 1017 aa4.41□□□□□ -1.7
FNDC3A-202ENST00000398316 LDHCP07864 332 aa4.41□□□□□ -1.7
FNDC3A-202ENST00000398316 C12orf60Q5U649 245 aa4.41□□□□□ -1.7
FNDC3A-202ENST00000398316 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.41□□□□□ -1.7
FNDC3A-202ENST00000398316 FAM237AA0A1B0GTK4 181 aa4.41□□□□□ -1.7
FNDC3A-202ENST00000398316 SURF6O75683 361 aaKnown RBP4.41□□□□□ -1.7
FNDC3A-202ENST00000398316 HOXA7P31268 230 aaPredicted RBP4.41□□□□□ -1.7
FNDC3A-202ENST00000398316 PHKA1P46020 1223 aa4.41□□□□□ -1.7
FNDC3A-202ENST00000398316 FUT2Q10981 343 aa4.41□□□□□ -1.7
FNDC3A-202ENST00000398316 FAM151AQ8WW52 585 aa4.41□□□□□ -1.7
FNDC3A-202ENST00000398316 ZNF274Q96GC6 653 aaPredicted RBP4.41□□□□□ -1.7
FNDC3A-202ENST00000398316 BCL2L13Q9BXK5 485 aa4.41□□□□□ -1.7
FNDC3A-202ENST00000398316 M0R2N6 131 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms