RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 ARHGEF10O15013 1369 aa12.5□□□□□ -0.41
HPS4-202ENST00000398145 GSTTP1A0A1W2PQM5 241 aa12.5□□□□□ -0.41
HPS4-202ENST00000398145 ZNF76P36508 570 aa12.5□□□□□ -0.41
HPS4-202ENST00000398145 ADKP55263 362 aaKnown RBP12.5□□□□□ -0.41
HPS4-202ENST00000398145 BEND3Q5T5X7 828 aa12.5□□□□□ -0.41
HPS4-202ENST00000398145 CLASP1Q7Z460 1538 aa12.5□□□□□ -0.41
HPS4-202ENST00000398145 IL17REQ8NFR9 667 aa12.5□□□□□ -0.41
HPS4-202ENST00000398145 CFAP65Q6ZU64 1925 aaKnown RBP12.49□□□□□ -0.41
HPS4-202ENST00000398145 TRPM1Q7Z4N2 1603 aa12.49□□□□□ -0.41
HPS4-202ENST00000398145 SYNRGQ9UMZ2 1314 aa12.49□□□□□ -0.41
HPS4-202ENST00000398145 BICDL2A1A5D9 508 aa12.49□□□□□ -0.41
HPS4-202ENST00000398145 GNAT2P19087 354 aa12.49□□□□□ -0.41
HPS4-202ENST00000398145 CMA1P23946 247 aa12.49□□□□□ -0.41
HPS4-202ENST00000398145 GIGYF2Q6Y7W6 1299 aaKnown RBP12.49□□□□□ -0.41
HPS4-202ENST00000398145 CCDC121Q6ZUS5 278 aa12.49□□□□□ -0.41
HPS4-202ENST00000398145 VWA3AA6NCI4 1184 aa12.49□□□□□ -0.41
HPS4-202ENST00000398145 NDUFAB1O14561 156 aa12.49□□□□□ -0.41
HPS4-202ENST00000398145 CALM1P0DP23 149 aa12.49□□□□□ -0.41
HPS4-202ENST00000398145 CALM2P0DP24 149 aa12.49□□□□□ -0.41
HPS4-202ENST00000398145 CALM3P0DP25 149 aa12.49□□□□□ -0.41
HPS4-202ENST00000398145 GBP2P32456 591 aaPredicted RBP12.49□□□□□ -0.41
HPS4-202ENST00000398145 SELENOOQ9BVL4 669 aa12.49□□□□□ -0.41
HPS4-202ENST00000398145 AATKQ6ZMQ8 1374 aa12.49□□□□□ -0.41
HPS4-202ENST00000398145 GOLGA6CA6NDK9 693 aa12.49□□□□□ -0.41
HPS4-202ENST00000398145 GOLGA6DP0CG33 693 aa12.49□□□□□ -0.41
HPS4-202ENST00000398145 NCBP1Q09161 790 aaKnown RBP12.49□□□□□ -0.41
HPS4-202ENST00000398145 WWC2Q6AWC2 1192 aa12.49□□□□□ -0.41
HPS4-202ENST00000398145 ZNF790Q6PG37 636 aa12.49□□□□□ -0.41
HPS4-202ENST00000398145 B4GALNT4Q76KP1 1039 aa12.49□□□□□ -0.41
HPS4-202ENST00000398145 PPP1R13BQ96KQ4 1090 aa12.49□□□□□ -0.41
HPS4-202ENST00000398145 GOLGA6AQ9NYA3 693 aa12.49□□□□□ -0.41
HPS4-202ENST00000398145 A0A1W2PQ27 194 aa12.49□□□□□ -0.41
HPS4-202ENST00000398145 A0A1W2PQ64 194 aa12.49□□□□□ -0.41
HPS4-202ENST00000398145 A0A1W2PQD8 194 aa12.49□□□□□ -0.41
HPS4-202ENST00000398145 ANKRD62A6NC57 917 aa12.49□□□□□ -0.41
HPS4-202ENST00000398145 A6NNZ2 444 aa12.49□□□□□ -0.41
HPS4-202ENST00000398145 GPAA1O43292 621 aa12.49□□□□□ -0.41
HPS4-202ENST00000398145 ATP8B1O43520 1251 aa12.49□□□□□ -0.41
HPS4-202ENST00000398145 DEXIO95424 95 aa12.49□□□□□ -0.41
HPS4-202ENST00000398145 EZRP15311 586 aaKnown RBP12.49□□□□□ -0.41
HPS4-202ENST00000398145 CETN2P41208 172 aa12.49□□□□□ -0.41
HPS4-202ENST00000398145 TUBB8Q3ZCM7 444 aa12.49□□□□□ -0.41
HPS4-202ENST00000398145 ANKRD18AQ8IVF6 992 aa12.49□□□□□ -0.41
HPS4-202ENST00000398145 STX8Q9UNK0 236 aa12.49□□□□□ -0.41
HPS4-202ENST00000398145 RTL9Q8NET4 1388 aa12.48□□□□□ -0.41
HPS4-202ENST00000398145 MACROD2A1Z1Q3 448 aa12.48□□□□□ -0.41
HPS4-202ENST00000398145 GNAQP50148 359 aa12.48□□□□□ -0.41
HPS4-202ENST00000398145 NDUFA8P51970 172 aa12.48□□□□□ -0.41
HPS4-202ENST00000398145 PNOCQ13519 176 aa12.48□□□□□ -0.41
HPS4-202ENST00000398145 CCDC91Q7Z6B0 441 aa12.48□□□□□ -0.41
HPS4-202ENST00000398145 CEP57Q86XR8 500 aa12.48□□□□□ -0.41
HPS4-202ENST00000398145 TRMT44Q8IYL2 757 aaKnown RBP12.48□□□□□ -0.41
HPS4-202ENST00000398145 IFT81Q8WYA0 676 aa12.48□□□□□ -0.41
HPS4-202ENST00000398145 CDC5LQ99459 802 aaKnown RBP12.48□□□□□ -0.41
HPS4-202ENST00000398145 TAF5LO75529 589 aa12.48□□□□□ -0.41
HPS4-202ENST00000398145 LARGE1O95461 756 aa12.48□□□□□ -0.41
HPS4-202ENST00000398145 TBC1D8BQ0IIM8 1120 aa12.48□□□□□ -0.41
HPS4-202ENST00000398145 KIAA0753Q2KHM9 967 aa12.48□□□□□ -0.41
HPS4-202ENST00000398145 BICDL1Q6ZP65 573 aa12.48□□□□□ -0.41
HPS4-202ENST00000398145 C11orf57Q6ZUT1 292 aaPredicted RBP12.48□□□□□ -0.41
HPS4-202ENST00000398145 RCOR1Q9UKL0 485 aa12.48□□□□□ -0.41
HPS4-202ENST00000398145 RABGGTAQ92696 567 aa12.48□□□□□ -0.41
HPS4-202ENST00000398145 PHKBQ93100 1093 aa12.48□□□□□ -0.41
HPS4-202ENST00000398145 CCDC114Q96M63 670 aa12.48□□□□□ -0.41
HPS4-202ENST00000398145 MCM7P33993 719 aa12.47□□□□□ -0.41
HPS4-202ENST00000398145 DESI2Q9BSY9 194 aa12.47□□□□□ -0.41
HPS4-202ENST00000398145 VAT1LQ9HCJ6 419 aa12.47□□□□□ -0.41
HPS4-202ENST00000398145 FANCLQ9NW38 375 aa12.47□□□□□ -0.41
HPS4-202ENST00000398145 SAMD9LQ8IVG5 1584 aa12.47□□□□□ -0.41
HPS4-202ENST00000398145 PLEKHG3A1L390 1219 aa12.47□□□□□ -0.41
HPS4-202ENST00000398145 INPP5BP32019 993 aa12.47□□□□□ -0.41
HPS4-202ENST00000398145 DTHD1Q6ZMT9 781 aa12.47□□□□□ -0.41
HPS4-202ENST00000398145 CRNKL1Q9BZJ0 848 aaKnown RBP12.47□□□□□ -0.41
HPS4-202ENST00000398145 TSGA10Q9BZW7 698 aa12.47□□□□□ -0.41
HPS4-202ENST00000398145 CTNND2Q9UQB3 1225 aa12.47□□□□□ -0.41
HPS4-202ENST00000398145 GCP02774 474 aa12.47□□□□□ -0.41
HPS4-202ENST00000398145 SCRN1Q12765 414 aa12.47□□□□□ -0.41
HPS4-202ENST00000398145 SEC62Q99442 399 aaKnown RBP12.47□□□□□ -0.41
HPS4-202ENST00000398145 DDX41Q9UJV9 622 aaKnown RBP12.47□□□□□ -0.41
HPS4-202ENST00000398145 GOLGA6BA6NDN3 693 aa12.47□□□□□ -0.41
HPS4-202ENST00000398145 STX10O60499 249 aa12.47□□□□□ -0.41
HPS4-202ENST00000398145 ZNF174Q15697 407 aa12.47□□□□□ -0.41
HPS4-202ENST00000398145 CHRNA2Q15822 529 aa12.47□□□□□ -0.41
HPS4-202ENST00000398145 GBP6Q6ZN66 633 aa12.47□□□□□ -0.41
HPS4-202ENST00000398145 FCHSD1Q86WN1 690 aa12.47□□□□□ -0.41
HPS4-202ENST00000398145 FBXO18Q8NFZ0 1043 aa12.47□□□□□ -0.41
HPS4-202ENST00000398145 SLF1Q9BQI6 1058 aa12.47□□□□□ -0.41
HPS4-202ENST00000398145 RTEL1Q9NZ71 1219 aa12.47□□□□□ -0.41
HPS4-202ENST00000398145 WWC3Q9ULE0 1092 aa12.47□□□□□ -0.41
HPS4-202ENST00000398145 SSR1P43307 286 aaKnown RBP12.46□□□□□ -0.41
HPS4-202ENST00000398145 TERF2Q15554 542 aa12.46□□□□□ -0.41
HPS4-202ENST00000398145 CPLX4Q7Z7G2 160 aa12.46□□□□□ -0.41
HPS4-202ENST00000398145 CCDC155Q8N6L0 562 aa12.46□□□□□ -0.41
HPS4-202ENST00000398145 PLBD2Q8NHP8 589 aa12.46□□□□□ -0.41
HPS4-202ENST00000398145 ZKSCAN3Q9BRR0 538 aa12.46□□□□□ -0.41
HPS4-202ENST00000398145 DPCR1Q3MIW9 517 aa12.46□□□□□ -0.41
HPS4-202ENST00000398145 FBXO38Q6PIJ6 1188 aa12.46□□□□□ -0.41
HPS4-202ENST00000398145 POTEDQ86YR6 584 aa12.46□□□□□ -0.41
HPS4-202ENST00000398145 MAGEB6Q8N7X4 407 aa12.46□□□□□ -0.41
HPS4-202ENST00000398145 CCDC51Q96ER9 411 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms