RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 WDR62O43379 1518 aa12.81□□□□□ -0.36
TTC28-201ENST00000397906 VAMP4O75379 141 aa12.81□□□□□ -0.36
TTC28-201ENST00000397906 SLC1A4P43007 532 aa12.81□□□□□ -0.36
TTC28-201ENST00000397906 ZNF830Q96NB3 372 aaPredicted RBP12.81□□□□□ -0.36
TTC28-201ENST00000397906 CARD14Q9BXL6 1004 aa12.81□□□□□ -0.36
TTC28-201ENST00000397906 MAST1Q9Y2H9 1570 aa12.81□□□□□ -0.36
TTC28-201ENST00000397906 ARHGEF10O15013 1369 aa12.81□□□□□ -0.36
TTC28-201ENST00000397906 F13A1P00488 732 aa12.81□□□□□ -0.36
TTC28-201ENST00000397906 SCNN1DP51172 638 aa12.81□□□□□ -0.36
TTC28-201ENST00000397906 GADL1Q6ZQY3 521 aa12.81□□□□□ -0.36
TTC28-201ENST00000397906 CSADQ9Y600 493 aa12.81□□□□□ -0.36
TTC28-201ENST00000397906 CFBP00751 764 aa12.81□□□□□ -0.36
TTC28-201ENST00000397906 DBNDD2Q9BQY9 259 aa12.81□□□□□ -0.36
TTC28-201ENST00000397906 STRN3Q13033 797 aa12.81□□□□□ -0.36
TTC28-201ENST00000397906 ABCC2Q92887 1545 aa12.81□□□□□ -0.36
TTC28-201ENST00000397906 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.81□□□□□ -0.36
TTC28-201ENST00000397906 NDC80O14777 642 aa12.81□□□□□ -0.36
TTC28-201ENST00000397906 TRIM37O94972 964 aa12.81□□□□□ -0.36
TTC28-201ENST00000397906 ERCC3P19447 782 aa12.81□□□□□ -0.36
TTC28-201ENST00000397906 CYLC1P35663 651 aaPredicted RBP12.81□□□□□ -0.36
TTC28-201ENST00000397906 PDE6BP35913 854 aa12.81□□□□□ -0.36
TTC28-201ENST00000397906 MAK16Q9BXY0 300 aaKnown RBP12.8□□□□□ -0.36
TTC28-201ENST00000397906 ZBED4O75132 1171 aa12.8□□□□□ -0.36
TTC28-201ENST00000397906 SMTNP53814 917 aa12.8□□□□□ -0.36
TTC28-201ENST00000397906 APBB1IPQ7Z5R6 666 aaPredicted RBP12.8□□□□□ -0.36
TTC28-201ENST00000397906 NEK11Q8NG66 645 aa12.8□□□□□ -0.36
TTC28-201ENST00000397906 NACA2Q9H009 215 aa12.8□□□□□ -0.36
TTC28-201ENST00000397906 SPATA5Q8NB90 893 aa12.8□□□□□ -0.36
TTC28-201ENST00000397906 TBC1D32Q96NH3 1257 aa12.8□□□□□ -0.36
TTC28-201ENST00000397906 TXKP42681 527 aa12.8□□□□□ -0.36
TTC28-201ENST00000397906 RASA3Q14644 834 aa12.8□□□□□ -0.36
TTC28-201ENST00000397906 TBX22Q9Y458 520 aa12.8□□□□□ -0.36
TTC28-201ENST00000397906 TTF2Q9UNY4 1162 aaKnown RBP12.8□□□□□ -0.36
TTC28-201ENST00000397906 CTNND2Q9UQB3 1225 aa12.8□□□□□ -0.36
TTC28-201ENST00000397906 COL17A1Q9UMD9 1497 aaPredicted RBP12.8□□□□□ -0.36
TTC28-201ENST00000397906 CSPG5O95196 566 aa12.8□□□□□ -0.36
TTC28-201ENST00000397906 SV2BQ7L1I2 683 aa12.8□□□□□ -0.36
TTC28-201ENST00000397906 CBX1P83916 185 aa12.8□□□□□ -0.36
TTC28-201ENST00000397906 WDR66Q8TBY9 1149 aa12.8□□□□□ -0.36
TTC28-201ENST00000397906 CAPZA3Q96KX2 299 aa12.8□□□□□ -0.36
TTC28-201ENST00000397906 HELLSQ9NRZ9 838 aa12.8□□□□□ -0.36
TTC28-201ENST00000397906 CCDC175P0C221 793 aa12.8□□□□□ -0.36
TTC28-201ENST00000397906 EHBP1Q8NDI1 1231 aa12.8□□□□□ -0.36
TTC28-201ENST00000397906 BICDL2A1A5D9 508 aa12.79□□□□□ -0.36
TTC28-201ENST00000397906 ATP7AQ04656 1500 aa12.79□□□□□ -0.36
TTC28-201ENST00000397906 GPAA1O43292 621 aa12.79□□□□□ -0.36
TTC28-201ENST00000397906 DHX32Q7L7V1 743 aaKnown RBP12.79□□□□□ -0.36
TTC28-201ENST00000397906 C2CD5Q86YS7 1000 aa12.79□□□□□ -0.36
TTC28-201ENST00000397906 TBC1D7Q9P0N9 293 aa12.79□□□□□ -0.36
TTC28-201ENST00000397906 CCDC114Q96M63 670 aa12.79□□□□□ -0.36
TTC28-201ENST00000397906 AZI2Q9H6S1 392 aa12.79□□□□□ -0.36
TTC28-201ENST00000397906 ATP6V0A2Q9Y487 856 aa12.79□□□□□ -0.36
TTC28-201ENST00000397906 MSANTD4Q8NCY6 345 aa12.79□□□□□ -0.36
TTC28-201ENST00000397906 M0QZ92 97 aa12.79□□□□□ -0.36
TTC28-201ENST00000397906 RLBP1P12271 317 aa12.79□□□□□ -0.36
TTC28-201ENST00000397906 WDR44Q5JSH3 913 aa12.79□□□□□ -0.36
TTC28-201ENST00000397906 MFSD14BQ5SR56 506 aa12.79□□□□□ -0.36
TTC28-201ENST00000397906 KIF4AO95239 1232 aa12.79□□□□□ -0.36
TTC28-201ENST00000397906 RASAL2Q9UJF2 1139 aa12.79□□□□□ -0.36
TTC28-201ENST00000397906 hCG_1642624A0A1W2PR95 340 aa12.79□□□□□ -0.36
TTC28-201ENST00000397906 SMIM23A6NLE4 172 aa12.79□□□□□ -0.36
TTC28-201ENST00000397906 KIAA0825Q8IV33 1275 aa12.79□□□□□ -0.36
TTC28-201ENST00000397906 SELENOOQ9BVL4 669 aa12.79□□□□□ -0.36
TTC28-201ENST00000397906 SREK1Q8WXA9 508 aaKnown RBP12.79□□□□□ -0.36
TTC28-201ENST00000397906 IFT74Q96LB3 600 aa12.78□□□□□ -0.36
TTC28-201ENST00000397906 NCOA5Q9HCD5 579 aaKnown RBP12.78□□□□□ -0.36
TTC28-201ENST00000397906 FAM47AQ5JRC9 791 aa12.78□□□□□ -0.36
TTC28-201ENST00000397906 RNF169Q8NCN4 708 aa12.78□□□□□ -0.36
TTC28-201ENST00000397906 ZFP91Q96JP5 570 aaPredicted RBP12.78□□□□□ -0.36
TTC28-201ENST00000397906 USP19O94966 1318 aa12.78□□□□□ -0.36
TTC28-201ENST00000397906 V9GY48 417 aaPredicted RBP12.78□□□□□ -0.36
TTC28-201ENST00000397906 NUP160Q12769 1436 aa12.78□□□□□ -0.36
TTC28-201ENST00000397906 TRPC3Q13507 836 aa12.78□□□□□ -0.36
TTC28-201ENST00000397906 METTL13Q8N6R0 699 aa12.78□□□□□ -0.36
TTC28-201ENST00000397906 LPIN2Q92539 896 aa12.78□□□□□ -0.36
TTC28-201ENST00000397906 AGTPBP1Q9UPW5 1226 aa12.78□□□□□ -0.36
TTC28-201ENST00000397906 SYT1P21579 422 aa12.78□□□□□ -0.36
TTC28-201ENST00000397906 SUCLG2Q96I99 432 aa12.78□□□□□ -0.36
TTC28-201ENST00000397906 HOOK2Q96ED9 719 aa12.78□□□□□ -0.36
TTC28-201ENST00000397906 MAPK8IP1Q9UQF2 711 aa12.78□□□□□ -0.36
TTC28-201ENST00000397906 MYCP01106 439 aaPredicted RBP12.78□□□□□ -0.36
TTC28-201ENST00000397906 KRT19P08727 400 aa12.78□□□□□ -0.36
TTC28-201ENST00000397906 DCPSQ96C86 337 aaKnown RBP12.78□□□□□ -0.36
TTC28-201ENST00000397906 CKAP4Q07065 602 aaKnown RBP12.78□□□□□ -0.36
TTC28-201ENST00000397906 MAPK8IP2Q13387 824 aaPredicted RBP12.78□□□□□ -0.36
TTC28-201ENST00000397906 CCDC65Q8IXS2 484 aa12.78□□□□□ -0.36
TTC28-201ENST00000397906 USP40Q9NVE5 1235 aa12.78□□□□□ -0.36
TTC28-201ENST00000397906 EDC4Q6P2E9 1401 aaKnown RBP12.77□□□□□ -0.36
TTC28-201ENST00000397906 NEMFO60524 1076 aa12.77□□□□□ -0.36
TTC28-201ENST00000397906 DTNBO60941 627 aa12.77□□□□□ -0.36
TTC28-201ENST00000397906 ZNF532Q9HCE3 1301 aa12.77□□□□□ -0.36
TTC28-201ENST00000397906 HSF2BPO75031 334 aa12.77□□□□□ -0.36
TTC28-201ENST00000397906 KCNQ4P56696 695 aa12.77□□□□□ -0.36
TTC28-201ENST00000397906 SLC8A3P57103 927 aa12.77□□□□□ -0.36
TTC28-201ENST00000397906 RAB3IL1Q8TBN0 382 aa12.77□□□□□ -0.36
TTC28-201ENST00000397906 CEP112Q8N8E3 955 aa12.77□□□□□ -0.36
TTC28-201ENST00000397906 ANO3Q9BYT9 981 aa12.77□□□□□ -0.36
TTC28-201ENST00000397906 GUCA1BQ9UMX6 200 aa12.77□□□□□ -0.36
TTC28-201ENST00000397906 ARHGEF35A5YM69 484 aa12.77□□□□□ -0.37
TTC28-201ENST00000397906 GPIHBP1Q8IV16 184 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms