RNA–Protein interactions for RNA: ENST00000397559.3

PDZD2-201, Transcript of PDZ domain containing 2, humanhuman

TSL 1 (best)

Gene PDZD2, Length 900 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD2-201ENST00000397559 NUP153P49790 1475 aaKnown RBP9.6□□□□□ -0.87
PDZD2-201ENST00000397559 ANKRD33BA6NCL7 494 aa9.6□□□□□ -0.87
PDZD2-201ENST00000397559 WISP1O95388 367 aa9.6□□□□□ -0.87
PDZD2-201ENST00000397559 FURINP09958 794 aa9.6□□□□□ -0.87
PDZD2-201ENST00000397559 NLRP12P59046 1061 aa9.6□□□□□ -0.87
PDZD2-201ENST00000397559 C19orf57Q0VDD7 668 aa9.6□□□□□ -0.87
PDZD2-201ENST00000397559 SUZ12Q15022 739 aaKnown RBP9.6□□□□□ -0.87
PDZD2-201ENST00000397559 AGGF1Q8N302 714 aaeCLIP9.6□□□□□ -0.87
PDZD2-201ENST00000397559 AKTIPQ9H8T0 292 aa9.6□□□□□ -0.87
PDZD2-201ENST00000397559 TPSG1Q9NRR2 321 aa9.6□□□□□ -0.87
PDZD2-201ENST00000397559 NLRP2Q9NX02 1062 aa9.6□□□□□ -0.87
PDZD2-201ENST00000397559 F8W735 103 aaPredicted RBP9.59□□□□□ -0.87
PDZD2-201ENST00000397559 ADAM11O75078 769 aa9.59□□□□□ -0.87
PDZD2-201ENST00000397559 ESRRAP11474 423 aaPredicted RBP9.59□□□□□ -0.87
PDZD2-201ENST00000397559 FMR1Q06787 632 aaKnown RBP eCLIP9.59□□□□□ -0.87
PDZD2-201ENST00000397559 DUOXA2Q1HG44 320 aa9.59□□□□□ -0.87
PDZD2-201ENST00000397559 ACAD11Q709F0 780 aa9.59□□□□□ -0.87
PDZD2-201ENST00000397559 UBASH3BQ8TF42 649 aa9.59□□□□□ -0.87
PDZD2-201ENST00000397559 ARHGEF12Q9NZN5 1544 aa9.58□□□□□ -0.88
PDZD2-201ENST00000397559 PCDH1Q08174 1060 aa9.58□□□□□ -0.88
PDZD2-201ENST00000397559 GRM2Q14416 872 aa9.58□□□□□ -0.88
PDZD2-201ENST00000397559 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.58□□□□□ -0.88
PDZD2-201ENST00000397559 TMEM130Q8N3G9 435 aa9.58□□□□□ -0.88
PDZD2-201ENST00000397559 SETDB2Q96T68 719 aa9.58□□□□□ -0.88
PDZD2-201ENST00000397559 CLEC4MQ9H2X3 399 aaPredicted RBP9.58□□□□□ -0.88
PDZD2-201ENST00000397559 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.57□□□□□ -0.88
PDZD2-201ENST00000397559 ABCB6Q9NP58 842 aa9.57□□□□□ -0.88
PDZD2-201ENST00000397559 TRAK1Q9UPV9 953 aa9.57□□□□□ -0.88
PDZD2-201ENST00000397559 IQSEC2Q5JU85 1478 aa9.57□□□□□ -0.88
PDZD2-201ENST00000397559 YEATS2Q9ULM3 1422 aa9.56□□□□□ -0.88
PDZD2-201ENST00000397559 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.56□□□□□ -0.88
PDZD2-201ENST00000397559 SIGLEC1Q9BZZ2 1709 aa9.56□□□□□ -0.88
PDZD2-201ENST00000397559 P4HBP07237 508 aaKnown RBP9.56□□□□□ -0.88
PDZD2-201ENST00000397559 GLB1P16278 677 aa9.56□□□□□ -0.88
PDZD2-201ENST00000397559 GSTM4Q03013 218 aa9.56□□□□□ -0.88
PDZD2-201ENST00000397559 PRPF40BQ6NWY9 871 aaKnown RBP9.56□□□□□ -0.88
PDZD2-201ENST00000397559 TP53INP1Q96A56 240 aa9.56□□□□□ -0.88
PDZD2-201ENST00000397559 MEGF10Q96KG7 1140 aa9.56□□□□□ -0.88
PDZD2-201ENST00000397559 BCL2L13Q9BXK5 485 aa9.56□□□□□ -0.88
PDZD2-201ENST00000397559 WWC3Q9ULE0 1092 aa9.56□□□□□ -0.88
PDZD2-201ENST00000397559 TMEM238LA0A1B0GVL6 79 aa9.55□□□□□ -0.88
PDZD2-201ENST00000397559 E9PSI1 815 aa9.55□□□□□ -0.88
PDZD2-201ENST00000397559 ATP2B2Q01814 1243 aa9.55□□□□□ -0.88
PDZD2-201ENST00000397559 ZNF423Q2M1K9 1284 aa9.55□□□□□ -0.88
PDZD2-201ENST00000397559 KIAA1211Q6ZU35 1233 aa9.55□□□□□ -0.88
PDZD2-201ENST00000397559 GLIS3Q8NEA6 775 aa9.55□□□□□ -0.88
PDZD2-201ENST00000397559 USP26Q9BXU7 913 aa9.55□□□□□ -0.88
PDZD2-201ENST00000397559 BCO2Q9BYV7 579 aa9.55□□□□□ -0.88
PDZD2-201ENST00000397559 ZNF576Q9H609 170 aa9.55□□□□□ -0.88
PDZD2-201ENST00000397559 HECW1Q76N89 1606 aa9.55□□□□□ -0.88
PDZD2-201ENST00000397559 C9orf84Q5VXU9 1444 aa9.55□□□□□ -0.88
PDZD2-201ENST00000397559 SPATA31D1Q6ZQQ2 1576 aa9.54□□□□□ -0.88
PDZD2-201ENST00000397559 ITPKAP23677 461 aa9.54□□□□□ -0.88
PDZD2-201ENST00000397559 HSPA2P54652 639 aa9.54□□□□□ -0.88
PDZD2-201ENST00000397559 FCGRTP55899 365 aa9.54□□□□□ -0.88
PDZD2-201ENST00000397559 ZNF428Q96B54 188 aa9.54□□□□□ -0.88
PDZD2-201ENST00000397559 SSBP4Q9BWG4 385 aaPredicted RBP9.54□□□□□ -0.88
PDZD2-201ENST00000397559 BCL11AQ9H165 835 aa9.54□□□□□ -0.88
PDZD2-201ENST00000397559 SOX17Q9H6I2 414 aaPredicted RBP9.54□□□□□ -0.88
PDZD2-201ENST00000397559 REREQ9P2R6 1566 aa9.54□□□□□ -0.88
PDZD2-201ENST00000397559 ATP10AO60312 1499 aa9.53□□□□□ -0.88
PDZD2-201ENST00000397559 DISP3Q9P2K9 1392 aa9.53□□□□□ -0.88
PDZD2-201ENST00000397559 RBM47A0AV96 593 aaKnown RBP9.53□□□□□ -0.88
PDZD2-201ENST00000397559 PLEKHD1A6NEE1 506 aa9.53□□□□□ -0.88
PDZD2-201ENST00000397559 NXPE4Q6UWF7 544 aa9.53□□□□□ -0.88
PDZD2-201ENST00000397559 DTHD1Q6ZMT9 781 aa9.53□□□□□ -0.88
PDZD2-201ENST00000397559 NPAS4Q8IUM7 802 aa9.53□□□□□ -0.88
PDZD2-201ENST00000397559 PPP4R2Q9NY27 417 aa9.53□□□□□ -0.88
PDZD2-201ENST00000397559 PTPRTO14522 1441 aa9.53□□□□□ -0.88
PDZD2-201ENST00000397559 STRCQ7RTU9 1775 aa9.52□□□□□ -0.88
PDZD2-201ENST00000397559 SETD1BQ9UPS6 1966 aaKnown RBP9.52□□□□□ -0.89
PDZD2-201ENST00000397559 K7ELQ4 463 aaPredicted RBP9.52□□□□□ -0.89
PDZD2-201ENST00000397559 RSPO4Q2I0M5 234 aaPredicted RBP9.52□□□□□ -0.89
PDZD2-201ENST00000397559 ZNF326Q5BKZ1 582 aaKnown RBP9.52□□□□□ -0.89
PDZD2-201ENST00000397559 ALG1LQ6GMV1 187 aa9.52□□□□□ -0.89
PDZD2-201ENST00000397559 FBF1Q8TES7 1133 aa9.52□□□□□ -0.89
PDZD2-201ENST00000397559 RUSC1Q9BVN2 902 aa9.52□□□□□ -0.89
PDZD2-201ENST00000397559 PLCH2O75038 1416 aa9.51□□□□□ -0.89
PDZD2-201ENST00000397559 UHRF1BP1Q6BDS2 1440 aa9.51□□□□□ -0.89
PDZD2-201ENST00000397559 LDHBP07195 334 aaKnown RBP9.51□□□□□ -0.89
PDZD2-201ENST00000397559 PTPN12Q05209 780 aaKnown RBP9.51□□□□□ -0.89
PDZD2-201ENST00000397559 NKAPLQ5M9Q1 402 aa9.51□□□□□ -0.89
PDZD2-201ENST00000397559 GIPC2Q8TF65 315 aa9.51□□□□□ -0.89
PDZD2-201ENST00000397559 SEMA6BQ9H3T3 888 aa9.51□□□□□ -0.89
PDZD2-201ENST00000397559 KDM5CP41229 1560 aa9.5□□□□□ -0.89
PDZD2-201ENST00000397559 EEA1Q15075 1411 aa9.5□□□□□ -0.89
PDZD2-201ENST00000397559 LOC100289279A0A1B0GTE1 492 aa9.5□□□□□ -0.89
PDZD2-201ENST00000397559 ADAM23O75077 832 aa9.5□□□□□ -0.89
PDZD2-201ENST00000397559 B3GALT4O96024 378 aa9.5□□□□□ -0.89
PDZD2-201ENST00000397559 ZNF157P51786 506 aaPredicted RBP9.5□□□□□ -0.89
PDZD2-201ENST00000397559 Q6ZS46 218 aa9.5□□□□□ -0.89
PDZD2-201ENST00000397559 DZIP1LQ8IYY4 767 aaKnown RBP9.5□□□□□ -0.89
PDZD2-201ENST00000397559 ZNF518AQ6AHZ1 1483 aa9.5□□□□□ -0.89
PDZD2-201ENST00000397559 MYO5CQ9NQX4 1742 aa9.49□□□□□ -0.89
PDZD2-201ENST00000397559 COL19A1Q14993 1142 aa9.49□□□□□ -0.89
PDZD2-201ENST00000397559 EAPPQ56P03 285 aaPredicted RBP9.49□□□□□ -0.89
PDZD2-201ENST00000397559 DDX54Q8TDD1 881 aaKnown RBP9.49□□□□□ -0.89
PDZD2-201ENST00000397559 UBL7Q96S82 380 aaPredicted RBP9.49□□□□□ -0.89
PDZD2-201ENST00000397559 CEP41Q9BYV8 373 aa9.49□□□□□ -0.89
PDZD2-201ENST00000397559 RNF208Q9H0X6 261 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms