RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 SPTY2D1Q68D10 685 aaPredicted RBP20.36■□□□□ 0.85
TSPAN4-205ENST00000397406 ZC3H15Q8WU90 426 aaKnown RBP20.36■□□□□ 0.85
TSPAN4-205ENST00000397406 TBC1D22AQ8WUA7 517 aa20.36■□□□□ 0.85
TSPAN4-205ENST00000397406 USP26Q9BXU7 913 aa20.36■□□□□ 0.85
TSPAN4-205ENST00000397406 UPF2Q9HAU5 1272 aaKnown RBP20.36■□□□□ 0.85
TSPAN4-205ENST00000397406 H7C1D1 291 aa20.36■□□□□ 0.85
TSPAN4-205ENST00000397406 M0R2C6 588 aa20.36■□□□□ 0.85
TSPAN4-205ENST00000397406 RPS12P25398 132 aaKnown RBP20.36■□□□□ 0.85
TSPAN4-205ENST00000397406 GRIK5Q16478 980 aa20.36■□□□□ 0.85
TSPAN4-205ENST00000397406 TTLL5Q6EMB2 1281 aa20.36■□□□□ 0.85
TSPAN4-205ENST00000397406 NSUN4Q96CB9 384 aaKnown RBP20.36■□□□□ 0.85
TSPAN4-205ENST00000397406 MXD3Q9BW11 206 aa20.36■□□□□ 0.85
TSPAN4-205ENST00000397406 LSG1Q9H089 658 aaKnown RBP20.36■□□□□ 0.85
TSPAN4-205ENST00000397406 PUS7LQ9H0K6 701 aaKnown RBP20.36■□□□□ 0.85
TSPAN4-205ENST00000397406 ANO2Q9NQ90 1003 aa20.36■□□□□ 0.85
TSPAN4-205ENST00000397406 LDHBP07195 334 aaKnown RBP20.35■□□□□ 0.85
TSPAN4-205ENST00000397406 MECOMQ03112 1051 aa20.35■□□□□ 0.85
TSPAN4-205ENST00000397406 DEFB115Q30KQ5 88 aa20.35■□□□□ 0.85
TSPAN4-205ENST00000397406 MFSD14BQ5SR56 506 aa20.35■□□□□ 0.85
TSPAN4-205ENST00000397406 CCDC129Q6ZRS4 1044 aa20.35■□□□□ 0.85
TSPAN4-205ENST00000397406 CCDC171Q6TFL3 1326 aa20.34■□□□□ 0.85
TSPAN4-205ENST00000397406 EPB41L2O43491 1005 aaKnown RBP20.34■□□□□ 0.85
TSPAN4-205ENST00000397406 ZNF280AP59817 542 aaPredicted RBP20.34■□□□□ 0.85
TSPAN4-205ENST00000397406 RBM26Q5T8P6 1007 aaKnown RBP20.34■□□□□ 0.85
TSPAN4-205ENST00000397406 RSBN1LQ6PCB5 846 aaPredicted RBP20.34■□□□□ 0.85
TSPAN4-205ENST00000397406 TMED8Q6PL24 325 aaPredicted RBP20.34■□□□□ 0.85
TSPAN4-205ENST00000397406 USP48Q86UV5 1035 aa20.34■□□□□ 0.85
TSPAN4-205ENST00000397406 TBC1D32Q96NH3 1257 aa20.34■□□□□ 0.85
TSPAN4-205ENST00000397406 TLL2Q9Y6L7 1015 aa20.34■□□□□ 0.85
TSPAN4-205ENST00000397406 CYP7A1P22680 504 aa20.33■□□□□ 0.84
TSPAN4-205ENST00000397406 FKBP1AP62942 108 aaKnown RBP20.33■□□□□ 0.84
TSPAN4-205ENST00000397406 PTH1RQ03431 593 aa20.33■□□□□ 0.84
TSPAN4-205ENST00000397406 DACT2Q5SW24 774 aa20.33■□□□□ 0.84
TSPAN4-205ENST00000397406 STRIP1Q5VSL9 837 aa20.33■□□□□ 0.84
TSPAN4-205ENST00000397406 NAA16Q6N069 864 aaPredicted RBP20.33■□□□□ 0.84
TSPAN4-205ENST00000397406 ADGRA1Q86SQ6 560 aa20.33■□□□□ 0.84
TSPAN4-205ENST00000397406 CERS5Q8N5B7 392 aa20.33■□□□□ 0.84
TSPAN4-205ENST00000397406 FBXW7Q969H0 707 aa20.33■□□□□ 0.84
TSPAN4-205ENST00000397406 C22orf23Q9BZE7 217 aa20.33■□□□□ 0.84
TSPAN4-205ENST00000397406 ABT1Q9ULW3 272 aaKnown RBP20.33■□□□□ 0.84
TSPAN4-205ENST00000397406 FOXN1O15353 648 aa20.32■□□□□ 0.84
TSPAN4-205ENST00000397406 CELF2O95319 508 aaKnown RBP20.32■□□□□ 0.84
TSPAN4-205ENST00000397406 KIAA1211Q6ZU35 1233 aa20.32■□□□□ 0.84
TSPAN4-205ENST00000397406 SUGT1Q9Y2Z0 365 aa20.32■□□□□ 0.84
TSPAN4-205ENST00000397406 WDR33Q9C0J8 1336 aaKnown RBP20.32■□□□□ 0.84
TSPAN4-205ENST00000397406 USP17L3A6NCW0 530 aa20.31■□□□□ 0.84
TSPAN4-205ENST00000397406 USP17L4A6NCW7 530 aa20.31■□□□□ 0.84
TSPAN4-205ENST00000397406 GPAA1O43292 621 aa20.31■□□□□ 0.84
TSPAN4-205ENST00000397406 RBM25P49756 843 aaKnown RBP20.31■□□□□ 0.84
TSPAN4-205ENST00000397406 KIF4BQ2VIQ3 1234 aa20.31■□□□□ 0.84
TSPAN4-205ENST00000397406 CYP4F22Q6NT55 531 aa20.31■□□□□ 0.84
TSPAN4-205ENST00000397406 CDC37L1Q7L3B6 337 aa20.31■□□□□ 0.84
TSPAN4-205ENST00000397406 USP17L1Q7RTZ2 530 aa20.31■□□□□ 0.84
TSPAN4-205ENST00000397406 SAPCD2Q86UD0 394 aa20.31■□□□□ 0.84
TSPAN4-205ENST00000397406 DZIP1Q86YF9 867 aaKnown RBP20.31■□□□□ 0.84
TSPAN4-205ENST00000397406 AGBL3Q8NEM8 1001 aa20.31■□□□□ 0.84
TSPAN4-205ENST00000397406 WBP1LQ9NX94 342 aa20.31■□□□□ 0.84
TSPAN4-205ENST00000397406 CDK5RAP2Q96SN8 1893 aa20.3■□□□□ 0.84
TSPAN4-205ENST00000397406 ADM5C9JUS6 153 aa20.3■□□□□ 0.84
TSPAN4-205ENST00000397406 MAP4K1Q92918 833 aa20.3■□□□□ 0.84
TSPAN4-205ENST00000397406 FOXP2O15409 715 aa20.28■□□□□ 0.84
TSPAN4-205ENST00000397406 MBD4O95243 580 aa20.28■□□□□ 0.84
TSPAN4-205ENST00000397406 GSTO1P78417 241 aa20.28■□□□□ 0.84
TSPAN4-205ENST00000397406 VPS53Q5VIR6 699 aa20.28■□□□□ 0.84
TSPAN4-205ENST00000397406 MIGA1Q8NAN2 632 aa20.28■□□□□ 0.84
TSPAN4-205ENST00000397406 AIDAQ96BJ3 306 aa20.28■□□□□ 0.84
TSPAN4-205ENST00000397406 CAPNS2Q96L46 248 aa20.28■□□□□ 0.84
TSPAN4-205ENST00000397406 STRBPQ96SI9 672 aaKnown RBP20.28■□□□□ 0.84
TSPAN4-205ENST00000397406 RIOK1Q9BRS2 568 aaKnown RBP20.28■□□□□ 0.84
TSPAN4-205ENST00000397406 DSCC1Q9BVC3 393 aa20.28■□□□□ 0.84
TSPAN4-205ENST00000397406 RBM19Q9Y4C8 960 aaKnown RBP20.28■□□□□ 0.84
TSPAN4-205ENST00000397406 LAMA4Q16363 1823 aa20.28■□□□□ 0.84
TSPAN4-205ENST00000397406 MROH7-TTC4A0A0A0MT08 1334 aa20.28■□□□□ 0.84
TSPAN4-205ENST00000397406 HSPD1P10809 573 aaKnown RBP20.27■□□□□ 0.84
TSPAN4-205ENST00000397406 DIXDC1Q155Q3 683 aa20.27■□□□□ 0.84
TSPAN4-205ENST00000397406 KRT26Q7Z3Y9 468 aa20.27■□□□□ 0.84
TSPAN4-205ENST00000397406 LCORLQ8N3X6 602 aa20.27■□□□□ 0.84
TSPAN4-205ENST00000397406 ZNF408Q9H9D4 720 aa20.27■□□□□ 0.84
TSPAN4-205ENST00000397406 GGA3Q9NZ52 723 aa20.27■□□□□ 0.84
TSPAN4-205ENST00000397406 TRPM7Q96QT4 1865 aa20.27■□□□□ 0.84
TSPAN4-205ENST00000397406 FOCADQ5VW36 1801 aa20.27■□□□□ 0.84
TSPAN4-205ENST00000397406 ECM29Q5VYK3 1845 aa20.27■□□□□ 0.84
TSPAN4-205ENST00000397406 THSD7BQ9C0I4 1608 aa20.27■□□□□ 0.84
TSPAN4-205ENST00000397406 MAGEB6P1A0A0J9YX57 407 aa20.27■□□□□ 0.83
TSPAN4-205ENST00000397406 AOC2O75106 756 aa20.27■□□□□ 0.83
TSPAN4-205ENST00000397406 HSPA4P34932 840 aa20.27■□□□□ 0.83
TSPAN4-205ENST00000397406 FAM163AQ96GL9 167 aaPredicted RBP20.27■□□□□ 0.83
TSPAN4-205ENST00000397406 ARMT1Q9H993 441 aa20.27■□□□□ 0.83
TSPAN4-205ENST00000397406 SCAF8Q9UPN6 1271 aaKnown RBP20.27■□□□□ 0.83
TSPAN4-205ENST00000397406 RBM8AQ9Y5S9 174 aaKnown RBP20.27■□□□□ 0.83
TSPAN4-205ENST00000397406 GAKO14976 1311 aa20.26■□□□□ 0.83
TSPAN4-205ENST00000397406 LDHCP07864 332 aa20.26■□□□□ 0.83
TSPAN4-205ENST00000397406 USP17L8P0C7I0 530 aa20.26■□□□□ 0.83
TSPAN4-205ENST00000397406 DYNLL1P63167 89 aaKnown RBP20.26■□□□□ 0.83
TSPAN4-205ENST00000397406 MYOZ2Q9NPC6 264 aa20.26■□□□□ 0.83
TSPAN4-205ENST00000397406 TTF2Q9UNY4 1162 aaKnown RBP20.26■□□□□ 0.83
TSPAN4-205ENST00000397406 NECTIN1Q15223 517 aa20.25■□□□□ 0.83
TSPAN4-205ENST00000397406 SLF2Q8IX21 1173 aa20.25■□□□□ 0.83
TSPAN4-205ENST00000397406 ZIC5Q96T25 663 aa20.25■□□□□ 0.83
TSPAN4-205ENST00000397406 BAZ2AQ9UIF9 1905 aaKnown RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms