RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 CACNB3P54284 484 aa10.71□□□□□ -0.69
SCFD1-202ENST00000396629 MOGSQ13724 837 aa10.71□□□□□ -0.69
SCFD1-202ENST00000396629 TAF7LQ5H9L4 462 aa10.71□□□□□ -0.69
SCFD1-202ENST00000396629 BEND3Q5T5X7 828 aa10.71□□□□□ -0.69
SCFD1-202ENST00000396629 DCAF15Q66K64 600 aa10.71□□□□□ -0.69
SCFD1-202ENST00000396629 FBXO33Q7Z6M2 555 aa10.71□□□□□ -0.69
SCFD1-202ENST00000396629 U2AF1L4Q8WU68 220 aaKnown RBP10.71□□□□□ -0.69
SCFD1-202ENST00000396629 ZDHHC15Q96MV8 337 aa10.71□□□□□ -0.69
SCFD1-202ENST00000396629 SGPL1O95470 568 aa10.7□□□□□ -0.7
SCFD1-202ENST00000396629 CCDC27Q2M243 656 aa10.7□□□□□ -0.7
SCFD1-202ENST00000396629 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.7□□□□□ -0.7
SCFD1-202ENST00000396629 TBC1D22AQ8WUA7 517 aa10.7□□□□□ -0.7
SCFD1-202ENST00000396629 TEKT1Q969V4 418 aa10.7□□□□□ -0.7
SCFD1-202ENST00000396629 ZNF341Q9BYN7 854 aa10.7□□□□□ -0.7
SCFD1-202ENST00000396629 ZNF112Q9UJU3 913 aa10.7□□□□□ -0.7
SCFD1-202ENST00000396629 AK9Q5TCS8 1911 aa10.7□□□□□ -0.7
SCFD1-202ENST00000396629 BCRP11274 1271 aa10.7□□□□□ -0.7
SCFD1-202ENST00000396629 MNX1P50219 401 aaPredicted RBP10.7□□□□□ -0.7
SCFD1-202ENST00000396629 PRKCZQ05513 592 aa10.7□□□□□ -0.7
SCFD1-202ENST00000396629 APOBEC3HQ6NTF7 200 aaKnown RBP10.7□□□□□ -0.7
SCFD1-202ENST00000396629 SLAIN1Q8ND83 568 aa10.7□□□□□ -0.7
SCFD1-202ENST00000396629 TMOD2Q9NZR1 351 aa10.7□□□□□ -0.7
SCFD1-202ENST00000396629 RANBP2P49792 3224 aaKnown RBP10.7□□□□□ -0.7
SCFD1-202ENST00000396629 IL16Q14005 1332 aa10.69□□□□□ -0.7
SCFD1-202ENST00000396629 INPP5BP32019 993 aa10.69□□□□□ -0.7
SCFD1-202ENST00000396629 LRCH3Q96II8 777 aa10.69□□□□□ -0.7
SCFD1-202ENST00000396629 PUS3Q9BZE2 481 aaKnown RBP10.69□□□□□ -0.7
SCFD1-202ENST00000396629 UNC93B1Q9H1C4 597 aa10.69□□□□□ -0.7
SCFD1-202ENST00000396629 PRKRIP1Q9H875 184 aaPredicted RBP10.69□□□□□ -0.7
SCFD1-202ENST00000396629 BIN2Q9UBW5 565 aaPredicted RBP10.69□□□□□ -0.7
SCFD1-202ENST00000396629 GRM8O00222 908 aa10.68□□□□□ -0.7
SCFD1-202ENST00000396629 FCGRTP55899 365 aa10.68□□□□□ -0.7
SCFD1-202ENST00000396629 CHAF1AQ13111 956 aaPredicted RBP10.68□□□□□ -0.7
SCFD1-202ENST00000396629 GPAT2Q6NUI2 795 aa10.68□□□□□ -0.7
SCFD1-202ENST00000396629 WWC1Q8IX03 1113 aa10.68□□□□□ -0.7
SCFD1-202ENST00000396629 GABRQQ9UN88 632 aa10.68□□□□□ -0.7
SCFD1-202ENST00000396629 SUGT1Q9Y2Z0 365 aa10.68□□□□□ -0.7
SCFD1-202ENST00000396629 MYH13Q9UKX3 1938 aa10.68□□□□□ -0.7
SCFD1-202ENST00000396629 MROH5Q6ZUA9 1318 aa10.68□□□□□ -0.7
SCFD1-202ENST00000396629 F6X3S4 739 aa10.68□□□□□ -0.7
SCFD1-202ENST00000396629 EVI5O60447 810 aa10.68□□□□□ -0.7
SCFD1-202ENST00000396629 VAMP4O75379 141 aa10.68□□□□□ -0.7
SCFD1-202ENST00000396629 NOL9Q5SY16 702 aaKnown RBP10.68□□□□□ -0.7
SCFD1-202ENST00000396629 GPR153Q6NV75 609 aa10.68□□□□□ -0.7
SCFD1-202ENST00000396629 HHIPL2Q6UWX4 724 aa10.68□□□□□ -0.7
SCFD1-202ENST00000396629 MIGA2Q7L4E1 593 aa10.68□□□□□ -0.7
SCFD1-202ENST00000396629 FAM151AQ8WW52 585 aa10.68□□□□□ -0.7
SCFD1-202ENST00000396629 IQSEC3Q9UPP2 1182 aaPredicted RBP10.68□□□□□ -0.7
SCFD1-202ENST00000396629 MAST3O60307 1309 aa10.68□□□□□ -0.7
SCFD1-202ENST00000396629 CXCL11O14625 94 aa10.67□□□□□ -0.7
SCFD1-202ENST00000396629 HOXD11P31277 338 aaPredicted RBP10.67□□□□□ -0.7
SCFD1-202ENST00000396629 BMP8BP34820 402 aa10.67□□□□□ -0.7
SCFD1-202ENST00000396629 VPS37DQ86XT2 251 aa10.67□□□□□ -0.7
SCFD1-202ENST00000396629 PARK7Q99497 189 aaKnown RBP10.67□□□□□ -0.7
SCFD1-202ENST00000396629 STAP2Q9UGK3 403 aa10.67□□□□□ -0.7
SCFD1-202ENST00000396629 PTPRFP10586 1907 aa10.67□□□□□ -0.7
SCFD1-202ENST00000396629 DOCK3Q8IZD9 2030 aa10.67□□□□□ -0.7
SCFD1-202ENST00000396629 COL6A3P12111 3177 aa10.67□□□□□ -0.7
SCFD1-202ENST00000396629 ADCY3O60266 1144 aa10.67□□□□□ -0.7
SCFD1-202ENST00000396629 PXYLP1Q8TE99 480 aa10.67□□□□□ -0.7
SCFD1-202ENST00000396629 CRISPLD2Q9H0B8 497 aa10.67□□□□□ -0.7
SCFD1-202ENST00000396629 TFRCP02786 760 aaKnown RBP10.66□□□□□ -0.7
SCFD1-202ENST00000396629 IRF5Q13568 498 aa10.66□□□□□ -0.7
SCFD1-202ENST00000396629 CAVIN4Q5BKX8 364 aa10.66□□□□□ -0.7
SCFD1-202ENST00000396629 KAZALD1Q96I82 304 aa10.66□□□□□ -0.7
SCFD1-202ENST00000396629 GDF15Q99988 308 aa10.66□□□□□ -0.7
SCFD1-202ENST00000396629 PHIPQ8WWQ0 1821 aa10.66□□□□□ -0.7
SCFD1-202ENST00000396629 DOCK2Q92608 1830 aa10.65□□□□□ -0.7
SCFD1-202ENST00000396629 FRAT2O75474 233 aaPredicted RBP10.65□□□□□ -0.7
SCFD1-202ENST00000396629 ALDH1L1O75891 902 aa10.65□□□□□ -0.7
SCFD1-202ENST00000396629 INHAP05111 366 aa10.65□□□□□ -0.7
SCFD1-202ENST00000396629 CYP2C8P10632 490 aa10.65□□□□□ -0.7
SCFD1-202ENST00000396629 VGLL2Q8N8G2 317 aa10.65□□□□□ -0.7
SCFD1-202ENST00000396629 SUCLG2Q96I99 432 aa10.65□□□□□ -0.7
SCFD1-202ENST00000396629 PAK6Q9NQU5 681 aaPredicted RBP10.65□□□□□ -0.7
SCFD1-202ENST00000396629 C9orf78Q9NZ63 289 aaPredicted RBP10.65□□□□□ -0.7
SCFD1-202ENST00000396629 FANCIQ9NVI1 1328 aa10.65□□□□□ -0.7
SCFD1-202ENST00000396629 ELNP15502 786 aa10.65□□□□□ -0.71
SCFD1-202ENST00000396629 FLT3LGP49771 235 aa10.65□□□□□ -0.71
SCFD1-202ENST00000396629 DEFB118Q96PH6 123 aa10.65□□□□□ -0.71
SCFD1-202ENST00000396629 SLC45A1Q9Y2W3 748 aa10.65□□□□□ -0.71
SCFD1-202ENST00000396629 KIF16BQ96L93 1317 aa10.65□□□□□ -0.71
SCFD1-202ENST00000396629 A0A0G2JLL6 359 aaPredicted RBP10.64□□□□□ -0.71
SCFD1-202ENST00000396629 BCAMP50895 628 aa10.64□□□□□ -0.71
SCFD1-202ENST00000396629 LRRC24Q50LG9 513 aa10.64□□□□□ -0.71
SCFD1-202ENST00000396629 FASTKD5Q7L8L6 764 aaKnown RBP10.64□□□□□ -0.71
SCFD1-202ENST00000396629 PRRT2Q7Z6L0 340 aaPredicted RBP10.64□□□□□ -0.71
SCFD1-202ENST00000396629 PAWRQ96IZ0 340 aaKnown RBP10.64□□□□□ -0.71
SCFD1-202ENST00000396629 PDE8BO95263 885 aa10.63□□□□□ -0.71
SCFD1-202ENST00000396629 METTL24Q5JXM2 366 aa10.63□□□□□ -0.71
SCFD1-202ENST00000396629 CDC42EP5Q6NZY7 148 aa10.63□□□□□ -0.71
SCFD1-202ENST00000396629 STXBP5LQ9Y2K9 1186 aa10.63□□□□□ -0.71
SCFD1-202ENST00000396629 UTYO14607 1347 aa10.63□□□□□ -0.71
SCFD1-202ENST00000396629 DOCK1Q14185 1865 aa10.63□□□□□ -0.71
SCFD1-202ENST00000396629 PHF20L1A8MW92 1017 aa10.63□□□□□ -0.71
SCFD1-202ENST00000396629 EXOSC9Q06265 439 aaKnown RBP10.63□□□□□ -0.71
SCFD1-202ENST00000396629 TCP10Q12799 353 aa10.63□□□□□ -0.71
SCFD1-202ENST00000396629 RABL6Q3YEC7 729 aaPredicted RBP10.63□□□□□ -0.71
SCFD1-202ENST00000396629 NECAB2Q7Z6G3 386 aa10.63□□□□□ -0.71
SCFD1-202ENST00000396629 DEFB123Q8N688 67 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms