RNA–Protein interactions for RNA: ENST00000396205.6

LMO3-205, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 3,534 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-205ENST00000396205 SNAP23O00161 211 aa8.12□□□□□ -1.11
LMO3-205ENST00000396205 PPP1R12BO60237 982 aaPredicted RBP8.12□□□□□ -1.11
LMO3-205ENST00000396205 PHKA1P46020 1223 aa8.12□□□□□ -1.11
LMO3-205ENST00000396205 SPRYD7Q5W111 196 aa8.12□□□□□ -1.11
LMO3-205ENST00000396205 DCAF15Q66K64 600 aa8.12□□□□□ -1.11
LMO3-205ENST00000396205 SPATA5Q8NB90 893 aa8.12□□□□□ -1.11
LMO3-205ENST00000396205 CASP8AP2Q9UKL3 1982 aa8.12□□□□□ -1.11
LMO3-205ENST00000396205 USP2O75604 605 aaPredicted RBP8.12□□□□□ -1.11
LMO3-205ENST00000396205 LDHCP07864 332 aa8.12□□□□□ -1.11
LMO3-205ENST00000396205 PLCG2P16885 1265 aa8.11□□□□□ -1.11
LMO3-205ENST00000396205 HTRA3P83110 453 aa8.11□□□□□ -1.11
LMO3-205ENST00000396205 PKN2Q16513 984 aaKnown RBP8.11□□□□□ -1.11
LMO3-205ENST00000396205 CYP4F22Q6NT55 531 aa8.11□□□□□ -1.11
LMO3-205ENST00000396205 ITPRIPQ8IWB1 547 aa8.11□□□□□ -1.11
LMO3-205ENST00000396205 FRAT1Q92837 279 aaPredicted RBP8.11□□□□□ -1.11
LMO3-205ENST00000396205 NSUN4Q96CB9 384 aaKnown RBP8.11□□□□□ -1.11
LMO3-205ENST00000396205 TMOD2Q9NZR1 351 aa8.11□□□□□ -1.11
LMO3-205ENST00000396205 HMG20BQ9P0W2 317 aa8.11□□□□□ -1.11
LMO3-205ENST00000396205 PA2G4Q9UQ80 394 aaKnown RBP8.11□□□□□ -1.11
LMO3-205ENST00000396205 TNNQ9UQP3 1299 aa8.11□□□□□ -1.11
LMO3-205ENST00000396205 SPDYE5A6NIY4 337 aa8.11□□□□□ -1.11
LMO3-205ENST00000396205 KIF1BPQ96EK5 621 aa8.11□□□□□ -1.11
LMO3-205ENST00000396205 WNK4Q96J92 1243 aa8.11□□□□□ -1.11
LMO3-205ENST00000396205 KCNH4Q9UQ05 1017 aa8.11□□□□□ -1.11
LMO3-205ENST00000396205 PARP14Q460N5 1801 aa8.11□□□□□ -1.11
LMO3-205ENST00000396205 RASA3Q14644 834 aa8.11□□□□□ -1.11
LMO3-205ENST00000396205 MYH8P13535 1937 aa8.1□□□□□ -1.11
LMO3-205ENST00000396205 CENPBP07199 599 aaPredicted RBP8.1□□□□□ -1.11
LMO3-205ENST00000396205 RHBDL3P58872 404 aa8.1□□□□□ -1.11
LMO3-205ENST00000396205 TTF1Q15361 905 aaPredicted RBP8.1□□□□□ -1.11
LMO3-205ENST00000396205 GRIK5Q16478 980 aa8.1□□□□□ -1.11
LMO3-205ENST00000396205 LAMA4Q16363 1823 aa8.1□□□□□ -1.11
LMO3-205ENST00000396205 PLIN1O60240 522 aa8.1□□□□□ -1.11
LMO3-205ENST00000396205 ADORA1P30542 326 aa8.1□□□□□ -1.11
LMO3-205ENST00000396205 MCAMP43121 646 aa8.1□□□□□ -1.11
LMO3-205ENST00000396205 ZNF157P51786 506 aaPredicted RBP8.1□□□□□ -1.11
LMO3-205ENST00000396205 FMR1Q06787 632 aaKnown RBP eCLIP8.1□□□□□ -1.11
LMO3-205ENST00000396205 PPIL2Q13356 520 aa8.1□□□□□ -1.11
LMO3-205ENST00000396205 CCDC158Q5M9N0 1113 aa8.1□□□□□ -1.11
LMO3-205ENST00000396205 CDC42EP5Q6NZY7 148 aa8.1□□□□□ -1.11
LMO3-205ENST00000396205 CSRNP1Q96S65 589 aa8.1□□□□□ -1.11
LMO3-205ENST00000396205 ZNF341Q9BYN7 854 aa8.1□□□□□ -1.11
LMO3-205ENST00000396205 PPATQ06203 517 aa8.09□□□□□ -1.11
LMO3-205ENST00000396205 SIRT2Q8IXJ6 389 aa8.09□□□□□ -1.11
LMO3-205ENST00000396205 ZNF384Q8TF68 577 aa8.09□□□□□ -1.11
LMO3-205ENST00000396205 OSBPL5Q9H0X9 879 aaPredicted RBP8.09□□□□□ -1.11
LMO3-205ENST00000396205 EHD4Q9H223 541 aa8.09□□□□□ -1.11
LMO3-205ENST00000396205 DHX36Q9H2U1 1008 aaKnown RBP8.09□□□□□ -1.11
LMO3-205ENST00000396205 AOX1Q06278 1338 aa8.09□□□□□ -1.11
LMO3-205ENST00000396205 ADGRA2Q96PE1 1338 aa8.09□□□□□ -1.11
LMO3-205ENST00000396205 KIF23Q02241 960 aaPredicted RBP8.09□□□□□ -1.11
LMO3-205ENST00000396205 FAM198AQ9UFP1 575 aa8.09□□□□□ -1.11
LMO3-205ENST00000396205 GNRH1P01148 92 aa8.09□□□□□ -1.11
LMO3-205ENST00000396205 PRDX5P30044 214 aa8.09□□□□□ -1.11
LMO3-205ENST00000396205 MAP3K9P80192 1104 aa8.09□□□□□ -1.11
LMO3-205ENST00000396205 RBM26Q5T8P6 1007 aaKnown RBP8.09□□□□□ -1.11
LMO3-205ENST00000396205 RNF186Q9NXI6 227 aa8.09□□□□□ -1.11
LMO3-205ENST00000396205 HERC5Q9UII4 1024 aaKnown RBP8.09□□□□□ -1.11
LMO3-205ENST00000396205 DBNLQ9UJU6 430 aaKnown RBP8.09□□□□□ -1.11
LMO3-205ENST00000396205 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.09□□□□□ -1.11
LMO3-205ENST00000396205 WDHD1O75717 1129 aaPredicted RBP8.08□□□□□ -1.12
LMO3-205ENST00000396205 GTF2A2P52657 109 aa8.08□□□□□ -1.12
LMO3-205ENST00000396205 MECOMQ03112 1051 aa8.08□□□□□ -1.12
LMO3-205ENST00000396205 RHPN1Q8TCX5 695 aa8.08□□□□□ -1.12
LMO3-205ENST00000396205 MS4A4AQ96JQ5 239 aa8.08□□□□□ -1.12
LMO3-205ENST00000396205 SIL1Q9H173 461 aa8.08□□□□□ -1.12
LMO3-205ENST00000396205 TDRD3Q9H7E2 651 aaKnown RBP8.08□□□□□ -1.12
LMO3-205ENST00000396205 PHF20L1A8MW92 1017 aa8.08□□□□□ -1.12
LMO3-205ENST00000396205 RGS19P49795 217 aa8.08□□□□□ -1.12
LMO3-205ENST00000396205 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.08□□□□□ -1.12
LMO3-205ENST00000396205 ERO1BQ86YB8 467 aa8.08□□□□□ -1.12
LMO3-205ENST00000396205 FBXW7Q969H0 707 aa8.08□□□□□ -1.12
LMO3-205ENST00000396205 BEGAINQ9BUH8 593 aa8.08□□□□□ -1.12
LMO3-205ENST00000396205 DCTPP1Q9H773 170 aa8.08□□□□□ -1.12
LMO3-205ENST00000396205 SNCAIPQ9Y6H5 919 aa8.08□□□□□ -1.12
LMO3-205ENST00000396205 ATP5JP18859 108 aa8.08□□□□□ -1.12
LMO3-205ENST00000396205 HDAC1Q13547 482 aaPredicted RBP8.08□□□□□ -1.12
LMO3-205ENST00000396205 NBPF12Q5TAG4 269 aaPredicted RBP8.08□□□□□ -1.12
LMO3-205ENST00000396205 IFNL1Q8IU54 200 aa8.08□□□□□ -1.12
LMO3-205ENST00000396205 CXCL11O14625 94 aa8.07□□□□□ -1.12
LMO3-205ENST00000396205 AOC2O75106 756 aa8.07□□□□□ -1.12
LMO3-205ENST00000396205 SURF6O75683 361 aaKnown RBP8.07□□□□□ -1.12
LMO3-205ENST00000396205 RRP1P56182 461 aaKnown RBP8.07□□□□□ -1.12
LMO3-205ENST00000396205 TIMM10P62072 90 aa8.07□□□□□ -1.12
LMO3-205ENST00000396205 ANKRD23Q86SG2 305 aa8.07□□□□□ -1.12
LMO3-205ENST00000396205 EAF2Q96CJ1 260 aaPredicted RBP8.07□□□□□ -1.12
LMO3-205ENST00000396205 CTNND1O60716 968 aaKnown RBP8.07□□□□□ -1.12
LMO3-205ENST00000396205 CYP2E1P05181 493 aaPredicted RBP8.07□□□□□ -1.12
LMO3-205ENST00000396205 OTUD7BQ6GQQ9 843 aa8.07□□□□□ -1.12
LMO3-205ENST00000396205 PANK1Q8TE04 598 aa8.07□□□□□ -1.12
LMO3-205ENST00000396205 CLUAP1Q96AJ1 413 aa8.07□□□□□ -1.12
LMO3-205ENST00000396205 PCDHAC2Q9Y5I4 1007 aa8.07□□□□□ -1.12
LMO3-205ENST00000396205 TTC41PQ6P2S7 1318 aa8.07□□□□□ -1.12
LMO3-205ENST00000396205 SALL3Q9BXA9 1300 aa8.07□□□□□ -1.12
LMO3-205ENST00000396205 ROBO3Q96MS0 1386 aa8.07□□□□□ -1.12
LMO3-205ENST00000396205 FRAT2O75474 233 aaPredicted RBP8.07□□□□□ -1.12
LMO3-205ENST00000396205 BAG3O95817 575 aa8.07□□□□□ -1.12
LMO3-205ENST00000396205 TTC39AQ5SRH9 613 aa8.07□□□□□ -1.12
LMO3-205ENST00000396205 DZIP1Q86YF9 867 aaKnown RBP8.07□□□□□ -1.12
LMO3-205ENST00000396205 NT5C2P49902 561 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms