RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 TRIM75PA6NK02 468 aa3.89□□□□□ -1.79
VPS13C-203ENST00000395896 SASH1O94885 1247 aa3.89□□□□□ -1.79
VPS13C-203ENST00000395896 YEATS4O95619 227 aa3.89□□□□□ -1.79
VPS13C-203ENST00000395896 TRIM21P19474 475 aaKnown RBP3.89□□□□□ -1.79
VPS13C-203ENST00000395896 MAGEB6Q8N7X4 407 aa3.89□□□□□ -1.79
VPS13C-203ENST00000395896 R3HCC1Q9Y3T6 440 aaKnown RBP3.89□□□□□ -1.79
VPS13C-203ENST00000395896 CYP19A1P11511 503 aaPredicted RBP3.88□□□□□ -1.79
VPS13C-203ENST00000395896 EIF5P55010 431 aaKnown RBP3.88□□□□□ -1.79
VPS13C-203ENST00000395896 KRT27Q7Z3Y8 459 aa3.88□□□□□ -1.79
VPS13C-203ENST00000395896 C16orf71Q8IYS4 520 aaPredicted RBP3.88□□□□□ -1.79
VPS13C-203ENST00000395896 CNNM3Q8NE01 707 aa3.88□□□□□ -1.79
VPS13C-203ENST00000395896 TEKT1Q969V4 418 aa3.88□□□□□ -1.79
VPS13C-203ENST00000395896 SWAP70Q9UH65 585 aa3.88□□□□□ -1.79
VPS13C-203ENST00000395896 DPP8Q6V1X1 898 aaPredicted RBP3.88□□□□□ -1.79
VPS13C-203ENST00000395896 IQUBQ8NA54 791 aa3.88□□□□□ -1.79
VPS13C-203ENST00000395896 SLC16A10Q8TF71 515 aa3.88□□□□□ -1.79
VPS13C-203ENST00000395896 CALML4Q96GE6 196 aa3.88□□□□□ -1.79
VPS13C-203ENST00000395896 QTRT2Q9H974 415 aaKnown RBP3.88□□□□□ -1.79
VPS13C-203ENST00000395896 MYH13Q9UKX3 1938 aa3.88□□□□□ -1.79
VPS13C-203ENST00000395896 SPDYE3A6NKU9 549 aa3.88□□□□□ -1.79
VPS13C-203ENST00000395896 OFD1O75665 1012 aa3.88□□□□□ -1.79
VPS13C-203ENST00000395896 STX1AQ16623 288 aa3.88□□□□□ -1.79
VPS13C-203ENST00000395896 Q6ZUG5 572 aa3.88□□□□□ -1.79
VPS13C-203ENST00000395896 ACSBG1Q96GR2 724 aa3.88□□□□□ -1.79
VPS13C-203ENST00000395896 ARGLU1Q9NWB6 273 aaPredicted RBP3.88□□□□□ -1.79
VPS13C-203ENST00000395896 PATL2C9JE40 543 aaKnown RBP3.88□□□□□ -1.79
VPS13C-203ENST00000395896 LAD1O00515 517 aa3.88□□□□□ -1.79
VPS13C-203ENST00000395896 RDXP35241 583 aaKnown RBP3.88□□□□□ -1.79
VPS13C-203ENST00000395896 ORC2Q13416 577 aaPredicted RBP3.88□□□□□ -1.79
VPS13C-203ENST00000395896 SF3B3Q15393 1217 aaKnown RBP3.88□□□□□ -1.79
VPS13C-203ENST00000395896 IQCEQ6IPM2 695 aa3.88□□□□□ -1.79
VPS13C-203ENST00000395896 LRSAM1Q6UWE0 723 aa3.88□□□□□ -1.79
VPS13C-203ENST00000395896 FNBP4Q8N3X1 1017 aaPredicted RBP3.88□□□□□ -1.79
VPS13C-203ENST00000395896 FBXO18Q8NFZ0 1043 aa3.88□□□□□ -1.79
VPS13C-203ENST00000395896 DNAI2Q9GZS0 605 aa3.88□□□□□ -1.79
VPS13C-203ENST00000395896 DHX36Q9H2U1 1008 aaKnown RBP3.88□□□□□ -1.79
VPS13C-203ENST00000395896 MYH11P35749 1972 aa3.88□□□□□ -1.79
VPS13C-203ENST00000395896 SPATA31A5Q5VU36 1347 aa3.88□□□□□ -1.79
VPS13C-203ENST00000395896 SPATA31A7Q8IWB4 1347 aa3.88□□□□□ -1.79
VPS13C-203ENST00000395896 MPNDQ8N594 471 aa3.88□□□□□ -1.79
VPS13C-203ENST00000395896 ZNF397Q8NF99 534 aaPredicted RBP3.88□□□□□ -1.79
VPS13C-203ENST00000395896 PES1O00541 588 aaKnown RBP3.88□□□□□ -1.79
VPS13C-203ENST00000395896 FOXD4L6Q3SYB3 417 aaPredicted RBP3.88□□□□□ -1.79
VPS13C-203ENST00000395896 FOXD4L3Q6VB84 417 aaPredicted RBP3.88□□□□□ -1.79
VPS13C-203ENST00000395896 VPS36Q86VN1 386 aa3.88□□□□□ -1.79
VPS13C-203ENST00000395896 FBXW7Q969H0 707 aa3.88□□□□□ -1.79
VPS13C-203ENST00000395896 SLC27A2O14975 620 aa3.88□□□□□ -1.79
VPS13C-203ENST00000395896 MFSD14BQ5SR56 506 aa3.88□□□□□ -1.79
VPS13C-203ENST00000395896 DGKHQ86XP1 1220 aa3.88□□□□□ -1.79
VPS13C-203ENST00000395896 PI4K2BQ8TCG2 481 aa3.88□□□□□ -1.79
VPS13C-203ENST00000395896 PDS5AQ29RF7 1337 aaKnown RBP3.88□□□□□ -1.79
VPS13C-203ENST00000395896 ALG1Q9BT22 464 aa3.88□□□□□ -1.79
VPS13C-203ENST00000395896 C6orf50Q9HD87 102 aa3.88□□□□□ -1.79
VPS13C-203ENST00000395896 ESPNB1AK53 854 aa3.88□□□□□ -1.79
VPS13C-203ENST00000395896 FGAP02671 866 aa3.88□□□□□ -1.79
VPS13C-203ENST00000395896 CSF1RP07333 972 aa3.88□□□□□ -1.79
VPS13C-203ENST00000395896 TUBBP07437 444 aa3.88□□□□□ -1.79
VPS13C-203ENST00000395896 RXRBP28702 533 aa3.88□□□□□ -1.79
VPS13C-203ENST00000395896 NECTIN1Q15223 517 aa3.88□□□□□ -1.79
VPS13C-203ENST00000395896 MAGEF1Q9HAY2 307 aa3.88□□□□□ -1.79
VPS13C-203ENST00000395896 ZSCAN12O43309 604 aa3.88□□□□□ -1.79
VPS13C-203ENST00000395896 TAF5LO75529 589 aa3.88□□□□□ -1.79
VPS13C-203ENST00000395896 BRD1O95696 1058 aa3.88□□□□□ -1.79
VPS13C-203ENST00000395896 NLRP5P59047 1200 aa3.88□□□□□ -1.79
VPS13C-203ENST00000395896 ZNF445P59923 1031 aa3.88□□□□□ -1.79
VPS13C-203ENST00000395896 MRPS27Q92552 414 aaKnown RBP3.88□□□□□ -1.79
VPS13C-203ENST00000395896 SNRKQ9NRH2 765 aa3.88□□□□□ -1.79
VPS13C-203ENST00000395896 NWD2Q9ULI1 1742 aa3.88□□□□□ -1.79
VPS13C-203ENST00000395896 SPTLC2O15270 562 aa3.88□□□□□ -1.79
VPS13C-203ENST00000395896 PDE6AP16499 860 aa3.88□□□□□ -1.79
VPS13C-203ENST00000395896 TTLL7Q6ZT98 887 aa3.88□□□□□ -1.79
VPS13C-203ENST00000395896 FAM114A1Q8IWE2 563 aa3.88□□□□□ -1.79
VPS13C-203ENST00000395896 NUP98P52948 1817 aa3.88□□□□□ -1.79
VPS13C-203ENST00000395896 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.88□□□□□ -1.79
VPS13C-203ENST00000395896 RAD21O60216 631 aa3.88□□□□□ -1.79
VPS13C-203ENST00000395896 ALX1Q15699 326 aa3.88□□□□□ -1.79
VPS13C-203ENST00000395896 FEZ1Q99689 392 aa3.88□□□□□ -1.79
VPS13C-203ENST00000395896 KDM4AO75164 1064 aa3.87□□□□□ -1.79
VPS13C-203ENST00000395896 SERPINC1P01008 464 aa3.87□□□□□ -1.79
VPS13C-203ENST00000395896 NF2P35240 595 aa3.87□□□□□ -1.79
VPS13C-203ENST00000395896 PLCD1P51178 756 aa3.87□□□□□ -1.79
VPS13C-203ENST00000395896 ALS2Q96Q42 1657 aa3.87□□□□□ -1.79
VPS13C-203ENST00000395896 STK3Q13188 491 aa3.87□□□□□ -1.79
VPS13C-203ENST00000395896 HAUS3Q68CZ6 603 aa3.87□□□□□ -1.79
VPS13C-203ENST00000395896 NAP1L5Q96NT1 182 aaPredicted RBP3.87□□□□□ -1.79
VPS13C-203ENST00000395896 GREM2Q9H772 168 aa3.87□□□□□ -1.79
VPS13C-203ENST00000395896 ZNF532Q9HCE3 1301 aa3.87□□□□□ -1.79
VPS13C-203ENST00000395896 CCDC172P0C7W6 258 aa3.87□□□□□ -1.79
VPS13C-203ENST00000395896 NPR1P16066 1061 aa3.87□□□□□ -1.79
VPS13C-203ENST00000395896 SYKP43405 635 aa3.87□□□□□ -1.79
VPS13C-203ENST00000395896 HOMER1Q86YM7 354 aa3.87□□□□□ -1.79
VPS13C-203ENST00000395896 ARHGEF10LQ9HCE6 1279 aa3.87□□□□□ -1.79
VPS13C-203ENST00000395896 MYO6Q9UM54 1294 aa3.87□□□□□ -1.79
VPS13C-203ENST00000395896 KCNQ3O43525 872 aa3.87□□□□□ -1.79
VPS13C-203ENST00000395896 KCTD17Q8N5Z5 321 aa3.87□□□□□ -1.79
VPS13C-203ENST00000395896 DDX17Q92841 729 aaKnown RBP3.87□□□□□ -1.79
VPS13C-203ENST00000395896 RABGAP1Q9Y3P9 1069 aa3.87□□□□□ -1.79
VPS13C-203ENST00000395896 LRRC37A3O60309 1634 aa3.87□□□□□ -1.79
VPS13C-203ENST00000395896 E7EWF7 191 aa3.87□□□□□ -1.79
VPS13C-203ENST00000395896 FAM160A1Q05DH4 1040 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms