RNA–Protein interactions for RNA: ENST00000395840.6

RAE1-202, Transcript of ribonucleic acid export 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAE1, Length 2,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-202ENST00000395840 CASC1Q6TDU7 716 aa10.54□□□□□ -0.72
RAE1-202ENST00000395840 SIRT2Q8IXJ6 389 aa10.54□□□□□ -0.72
RAE1-202ENST00000395840 SUPT20HQ8NEM7 779 aa10.54□□□□□ -0.72
RAE1-202ENST00000395840 INTS4Q96HW7 963 aaKnown RBP10.54□□□□□ -0.72
RAE1-202ENST00000395840 VPS33BQ9H267 617 aa10.54□□□□□ -0.72
RAE1-202ENST00000395840 ATP6V0A2Q9Y487 856 aa10.54□□□□□ -0.72
RAE1-202ENST00000395840 FIBPO43427 364 aa10.53□□□□□ -0.72
RAE1-202ENST00000395840 OAS2P29728 719 aaKnown RBP10.53□□□□□ -0.72
RAE1-202ENST00000395840 MCM2P49736 904 aa10.53□□□□□ -0.72
RAE1-202ENST00000395840 ZNF75DP51815 510 aa10.53□□□□□ -0.72
RAE1-202ENST00000395840 CCDC144BQ3MJ40 725 aa10.53□□□□□ -0.72
RAE1-202ENST00000395840 ARHGAP29Q52LW3 1261 aa10.53□□□□□ -0.72
RAE1-202ENST00000395840 TMCO3Q6UWJ1 677 aa10.53□□□□□ -0.72
RAE1-202ENST00000395840 CCDC144CPQ8IYA2 1237 aa10.53□□□□□ -0.72
RAE1-202ENST00000395840 LRRN4CLQ8ND94 238 aa10.53□□□□□ -0.72
RAE1-202ENST00000395840 TRMT1Q9NXH9 659 aaKnown RBP10.53□□□□□ -0.72
RAE1-202ENST00000395840 RPAP1Q9BWH6 1393 aaPredicted RBP10.53□□□□□ -0.72
RAE1-202ENST00000395840 ZBTB7BO15156 539 aaPredicted RBP10.53□□□□□ -0.72
RAE1-202ENST00000395840 TDO2P48775 406 aa10.53□□□□□ -0.72
RAE1-202ENST00000395840 REXO1L1PQ8IX06 675 aa10.53□□□□□ -0.72
RAE1-202ENST00000395840 C16orf71Q8IYS4 520 aaPredicted RBP10.53□□□□□ -0.72
RAE1-202ENST00000395840 SUCLG2Q96I99 432 aa10.53□□□□□ -0.72
RAE1-202ENST00000395840 FBXO3Q9UK99 471 aa10.53□□□□□ -0.72
RAE1-202ENST00000395840 LTBP3Q9NS15 1303 aa10.52□□□□□ -0.73
RAE1-202ENST00000395840 SDSP20132 328 aa10.52□□□□□ -0.73
RAE1-202ENST00000395840 LMAN1P49257 510 aa10.52□□□□□ -0.73
RAE1-202ENST00000395840 GSCP56915 257 aaPredicted RBP10.52□□□□□ -0.73
RAE1-202ENST00000395840 LMBR1LQ6UX01 489 aa10.52□□□□□ -0.73
RAE1-202ENST00000395840 C3orf67Q6ZVT6 689 aa10.52□□□□□ -0.73
RAE1-202ENST00000395840 PLA2G4DQ86XP0 818 aa10.52□□□□□ -0.73
RAE1-202ENST00000395840 FAM212AQ96EL1 285 aa10.52□□□□□ -0.73
RAE1-202ENST00000395840 MPHOSPH8Q99549 860 aa10.52□□□□□ -0.73
RAE1-202ENST00000395840 BSDC1Q9NW68 430 aaPredicted RBP10.52□□□□□ -0.73
RAE1-202ENST00000395840 CLIP2Q9UDT6 1046 aa10.52□□□□□ -0.73
RAE1-202ENST00000395840 ITGA6P23229 1130 aa10.52□□□□□ -0.73
RAE1-202ENST00000395840 ANKRD2Q9GZV1 360 aa10.52□□□□□ -0.73
RAE1-202ENST00000395840 BICC1Q9H694 974 aaKnown RBP10.52□□□□□ -0.73
RAE1-202ENST00000395840 CHMP3Q9Y3E7 222 aa10.52□□□□□ -0.73
RAE1-202ENST00000395840 KIF1CO43896 1103 aaKnown RBP10.51□□□□□ -0.73
RAE1-202ENST00000395840 SEC31AO94979 1220 aaKnown RBP10.51□□□□□ -0.73
RAE1-202ENST00000395840 C7orf43Q8WVR3 580 aa10.51□□□□□ -0.73
RAE1-202ENST00000395840 UBXN6Q9BZV1 441 aa10.51□□□□□ -0.73
RAE1-202ENST00000395840 GREM2Q9H772 168 aa10.51□□□□□ -0.73
RAE1-202ENST00000395840 ARGLU1Q9NWB6 273 aaPredicted RBP10.51□□□□□ -0.73
RAE1-202ENST00000395840 C21orf2O43822 256 aa10.51□□□□□ -0.73
RAE1-202ENST00000395840 ACTN2P35609 894 aa10.51□□□□□ -0.73
RAE1-202ENST00000395840 MTX1Q13505 466 aa10.51□□□□□ -0.73
RAE1-202ENST00000395840 ARID5BQ14865 1188 aa10.51□□□□□ -0.73
RAE1-202ENST00000395840 ARHGAP27Q6ZUM4 889 aa10.51□□□□□ -0.73
RAE1-202ENST00000395840 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.51□□□□□ -0.73
RAE1-202ENST00000395840 LRRC8AQ8IWT6 810 aa10.51□□□□□ -0.73
RAE1-202ENST00000395840 CEP120Q8N960 986 aa10.51□□□□□ -0.73
RAE1-202ENST00000395840 CNKSR2Q8WXI2 1034 aa10.51□□□□□ -0.73
RAE1-202ENST00000395840 PSMD1Q99460 953 aa10.51□□□□□ -0.73
RAE1-202ENST00000395840 MEIS3Q99687 375 aa10.51□□□□□ -0.73
RAE1-202ENST00000395840 MRVI1Q9Y6F6 885 aa10.51□□□□□ -0.73
RAE1-202ENST00000395840 ERC2O15083 957 aa10.5□□□□□ -0.73
RAE1-202ENST00000395840 YBX3P16989 372 aaKnown RBP eCLIP10.5□□□□□ -0.735e-6■□□□□ 9.5
RAE1-202ENST00000395840 SMC1AQ14683 1233 aaKnown RBP10.5□□□□□ -0.73
RAE1-202ENST00000395840 MED4Q9NPJ6 270 aa10.5□□□□□ -0.73
RAE1-202ENST00000395840 EIF3CLB5ME19 914 aaKnown RBP10.5□□□□□ -0.73
RAE1-202ENST00000395840 CASTP20810 708 aaKnown RBP10.5□□□□□ -0.73
RAE1-202ENST00000395840 FKBP4Q02790 459 aaKnown RBP eCLIP10.5□□□□□ -0.73
RAE1-202ENST00000395840 SWT1Q5T5J6 900 aaKnown RBP10.5□□□□□ -0.73
RAE1-202ENST00000395840 MCTP2Q6DN12 878 aa10.5□□□□□ -0.73
RAE1-202ENST00000395840 FILIP1Q7Z7B0 1213 aa10.5□□□□□ -0.73
RAE1-202ENST00000395840 IQUBQ8NA54 791 aa10.5□□□□□ -0.73
RAE1-202ENST00000395840 MNS1Q8NEH6 495 aa10.5□□□□□ -0.73
RAE1-202ENST00000395840 OTUD7AQ8TE49 926 aaPredicted RBP10.5□□□□□ -0.73
RAE1-202ENST00000395840 EIF3CQ99613 913 aaKnown RBP10.5□□□□□ -0.73
RAE1-202ENST00000395840 TAOK3Q9H2K8 898 aa10.5□□□□□ -0.73
RAE1-202ENST00000395840 CBX8Q9HC52 389 aa10.5□□□□□ -0.73
RAE1-202ENST00000395840 SLX4Q8IY92 1834 aa10.5□□□□□ -0.73
RAE1-202ENST00000395840 ZC3H4Q9UPT8 1303 aaKnown RBP10.49□□□□□ -0.73
RAE1-202ENST00000395840 SKILP12757 684 aa10.49□□□□□ -0.73
RAE1-202ENST00000395840 TYRO3Q06418 890 aa10.49□□□□□ -0.73
RAE1-202ENST00000395840 SUGP1Q8IWZ8 645 aaKnown RBP10.49□□□□□ -0.73
RAE1-202ENST00000395840 ANKRD44Q8N8A2 993 aa10.49□□□□□ -0.73
RAE1-202ENST00000395840 PPM1EQ8WY54 764 aa10.49□□□□□ -0.73
RAE1-202ENST00000395840 CELF1Q92879 486 aaKnown RBP10.49□□□□□ -0.73
RAE1-202ENST00000395840 CCDC34Q96HJ3 373 aa10.49□□□□□ -0.73
RAE1-202ENST00000395840 KAZALD1Q96I82 304 aa10.49□□□□□ -0.73
RAE1-202ENST00000395840 EYA3Q99504 573 aa10.49□□□□□ -0.73
RAE1-202ENST00000395840 L2HGDHQ9H9P8 463 aa10.49□□□□□ -0.73
RAE1-202ENST00000395840 ADAM21Q9UKJ8 722 aa10.49□□□□□ -0.73
RAE1-202ENST00000395840 LRRC37AA6NMS7 1700 aa10.49□□□□□ -0.73
RAE1-202ENST00000395840 GOLIM4O00461 696 aa10.49□□□□□ -0.73
RAE1-202ENST00000395840 SASH3O75995 380 aa10.49□□□□□ -0.73
RAE1-202ENST00000395840 MAP2K2P36507 400 aa10.49□□□□□ -0.73
RAE1-202ENST00000395840 EPHA10Q5JZY3 1008 aa10.49□□□□□ -0.73
RAE1-202ENST00000395840 DPP8Q6V1X1 898 aaPredicted RBP10.49□□□□□ -0.73
RAE1-202ENST00000395840 RPAP2Q8IXW5 612 aaPredicted RBP10.49□□□□□ -0.73
RAE1-202ENST00000395840 EXOC4Q96A65 974 aa10.49□□□□□ -0.73
RAE1-202ENST00000395840 RTFDC1Q9BY42 306 aaPredicted RBP10.49□□□□□ -0.73
RAE1-202ENST00000395840 SEC31BQ9NQW1 1179 aa10.49□□□□□ -0.73
RAE1-202ENST00000395840 XDHP47989 1333 aa10.48□□□□□ -0.73
RAE1-202ENST00000395840 MROH5Q6ZUA9 1318 aa10.48□□□□□ -0.73
RAE1-202ENST00000395840 CACNA1SQ13698 1873 aa10.48□□□□□ -0.73
RAE1-202ENST00000395840 CCDC189A1A4V9 331 aa10.48□□□□□ -0.73
RAE1-202ENST00000395840 HMMRO75330 724 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms