RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 CDC42EP5Q6NZY7 148 aa22.39■■□□□ 1.17
CXCL12-204ENST00000395793 DENND2AQ9ULE3 1009 aa22.39■■□□□ 1.17
CXCL12-204ENST00000395793 SNCAIPQ9Y6H5 919 aa22.39■■□□□ 1.17
CXCL12-204ENST00000395793 A0A1B0GUL7 405 aa22.38■■□□□ 1.17
CXCL12-204ENST00000395793 LDHBP07195 334 aaKnown RBP22.38■■□□□ 1.17
CXCL12-204ENST00000395793 SOX10P56693 466 aa22.38■■□□□ 1.17
CXCL12-204ENST00000395793 NFIAQ12857 509 aa22.38■■□□□ 1.17
CXCL12-204ENST00000395793 CRHR2Q13324 411 aa22.38■■□□□ 1.17
CXCL12-204ENST00000395793 DIEXFQ68CQ4 756 aaKnown RBP22.38■■□□□ 1.17
CXCL12-204ENST00000395793 TMEM57Q8N5G2 664 aa22.38■■□□□ 1.17
CXCL12-204ENST00000395793 BRI3BPQ8WY22 251 aa22.38■■□□□ 1.17
CXCL12-204ENST00000395793 DOCK2Q92608 1830 aa22.38■■□□□ 1.17
CXCL12-204ENST00000395793 GNAI2P04899 355 aa22.37■■□□□ 1.17
CXCL12-204ENST00000395793 XAGE2Q96GT9 111 aa22.37■■□□□ 1.17
CXCL12-204ENST00000395793 WRNIP1Q96S55 665 aa22.37■■□□□ 1.17
CXCL12-204ENST00000395793 SPDYE5A6NIY4 337 aa22.36■■□□□ 1.17
CXCL12-204ENST00000395793 TCP10Q12799 353 aa22.36■■□□□ 1.17
CXCL12-204ENST00000395793 PKN2Q16513 984 aaKnown RBP22.36■■□□□ 1.17
CXCL12-204ENST00000395793 FAM151AQ8WW52 585 aa22.36■■□□□ 1.17
CXCL12-204ENST00000395793 ZKSCAN4Q969J2 545 aaPredicted RBP22.36■■□□□ 1.17
CXCL12-204ENST00000395793 OTUD5Q96G74 571 aa22.36■■□□□ 1.17
CXCL12-204ENST00000395793 FAM198AQ9UFP1 575 aa22.36■■□□□ 1.17
CXCL12-204ENST00000395793 CSADQ9Y600 493 aa22.36■■□□□ 1.17
CXCL12-204ENST00000395793 CAP1Q01518 475 aa22.35■■□□□ 1.17
CXCL12-204ENST00000395793 ZKSCAN2Q63HK3 967 aa22.35■■□□□ 1.17
CXCL12-204ENST00000395793 RFX7Q2KHR2 1363 aa22.35■■□□□ 1.17
CXCL12-204ENST00000395793 GAKO14976 1311 aa22.34■■□□□ 1.17
CXCL12-204ENST00000395793 PDS5AQ29RF7 1337 aaKnown RBP22.34■■□□□ 1.17
CXCL12-204ENST00000395793 CCL15-CCL14A0A0B4J2E2 113 aa22.34■■□□□ 1.17
CXCL12-204ENST00000395793 CCL15Q16663 113 aa22.34■■□□□ 1.17
CXCL12-204ENST00000395793 FBXO46Q6PJ61 603 aaPredicted RBP22.34■■□□□ 1.17
CXCL12-204ENST00000395793 MIGA2Q7L4E1 593 aa22.34■■□□□ 1.17
CXCL12-204ENST00000395793 ZFPM1Q8IX07 1006 aa22.34■■□□□ 1.17
CXCL12-204ENST00000395793 INPP5BP32019 993 aa22.33■■□□□ 1.17
CXCL12-204ENST00000395793 FAM43AQ8N2R8 423 aa22.33■■□□□ 1.17
CXCL12-204ENST00000395793 USP40Q9NVE5 1235 aa22.33■■□□□ 1.17
CXCL12-204ENST00000395793 AKAP2Q9Y2D5 859 aa22.33■■□□□ 1.17
CXCL12-204ENST00000395793 ZSWIM8A7E2V4 1837 aa22.33■■□□□ 1.16
CXCL12-204ENST00000395793 GTF2A2P52657 109 aa22.32■■□□□ 1.16
CXCL12-204ENST00000395793 DCAF15Q66K64 600 aa22.32■■□□□ 1.16
CXCL12-204ENST00000395793 PI16Q6UXB8 463 aa22.32■■□□□ 1.16
CXCL12-204ENST00000395793 ERO1BQ86YB8 467 aa22.32■■□□□ 1.16
CXCL12-204ENST00000395793 ZNF384Q8TF68 577 aa22.32■■□□□ 1.16
CXCL12-204ENST00000395793 ZNF341Q9BYN7 854 aa22.32■■□□□ 1.16
CXCL12-204ENST00000395793 ATRNL1Q5VV63 1379 aa22.32■■□□□ 1.16
CXCL12-204ENST00000395793 TNRC18O15417 2968 aaPredicted RBP22.31■■□□□ 1.16
CXCL12-204ENST00000395793 RLBP1P12271 317 aa22.31■■□□□ 1.16
CXCL12-204ENST00000395793 MVPQ14764 893 aaKnown RBP22.31■■□□□ 1.16
CXCL12-204ENST00000395793 OTUD7BQ6GQQ9 843 aa22.31■■□□□ 1.16
CXCL12-204ENST00000395793 OTOP1Q7RTM1 612 aa22.31■■□□□ 1.16
CXCL12-204ENST00000395793 ZGPATQ8N5A5 531 aaKnown RBP22.31■■□□□ 1.16
CXCL12-204ENST00000395793 CD99L2Q8TCZ2 262 aa22.31■■□□□ 1.16
CXCL12-204ENST00000395793 HOOK2Q96ED9 719 aa22.31■■□□□ 1.16
CXCL12-204ENST00000395793 NEUROD6Q96NK8 337 aa22.31■■□□□ 1.16
CXCL12-204ENST00000395793 ABCF2Q9UG63 623 aa22.31■■□□□ 1.16
CXCL12-204ENST00000395793 TRIM17Q9Y577 477 aa22.31■■□□□ 1.16
CXCL12-204ENST00000395793 IRF6O14896 467 aa22.3■■□□□ 1.16
CXCL12-204ENST00000395793 POLA2Q14181 598 aa22.3■■□□□ 1.16
CXCL12-204ENST00000395793 C1orf115Q9H7X2 142 aa22.3■■□□□ 1.16
CXCL12-204ENST00000395793 HMG20BQ9P0W2 317 aa22.3■■□□□ 1.16
CXCL12-204ENST00000395793 ZNF112Q9UJU3 913 aa22.3■■□□□ 1.16
CXCL12-204ENST00000395793 HTTP42858 3142 aa22.3■■□□□ 1.16
CXCL12-204ENST00000395793 RGS3P49796 1198 aa22.29■■□□□ 1.16
CXCL12-204ENST00000395793 PPIL2Q13356 520 aa22.29■■□□□ 1.16
CXCL12-204ENST00000395793 TAF1CQ15572 869 aaPredicted RBP22.29■■□□□ 1.16
CXCL12-204ENST00000395793 DZIP1Q86YF9 867 aaKnown RBP22.29■■□□□ 1.16
CXCL12-204ENST00000395793 MYO5AQ9Y4I1 1855 aaKnown RBP22.28■■□□□ 1.16
CXCL12-204ENST00000395793 G3BP1Q13283 466 aaKnown RBP eCLIP22.28■■□□□ 1.16
CXCL12-204ENST00000395793 SH3BP5LQ7L8J4 393 aa22.28■■□□□ 1.16
CXCL12-204ENST00000395793 IDI2Q9BXS1 227 aa22.28■■□□□ 1.16
CXCL12-204ENST00000395793 DDX4Q9NQI0 724 aaKnown RBP22.28■■□□□ 1.16
CXCL12-204ENST00000395793 MROH7-TTC4A0A0A0MT08 1334 aa22.28■■□□□ 1.16
CXCL12-204ENST00000395793 ZBED9Q6R2W3 1325 aa22.28■■□□□ 1.16
CXCL12-204ENST00000395793 WDHD1O75717 1129 aaPredicted RBP22.27■■□□□ 1.16
CXCL12-204ENST00000395793 SLURP2P0DP57 97 aa22.27■■□□□ 1.16
CXCL12-204ENST00000395793 ARID4AP29374 1257 aaPredicted RBP22.27■■□□□ 1.16
CXCL12-204ENST00000395793 SP3Q02447 781 aa22.27■■□□□ 1.16
CXCL12-204ENST00000395793 MECOMQ03112 1051 aa22.27■■□□□ 1.16
CXCL12-204ENST00000395793 TBC1D9Q6ZT07 1266 aa22.27■■□□□ 1.16
CXCL12-204ENST00000395793 SSH3Q8TE77 659 aa22.27■■□□□ 1.16
CXCL12-204ENST00000395793 FAM163AQ96GL9 167 aaPredicted RBP22.27■■□□□ 1.16
CXCL12-204ENST00000395793 ERO1AQ96HE7 468 aa22.27■■□□□ 1.16
CXCL12-204ENST00000395793 MAST2Q6P0Q8 1798 aa22.27■■□□□ 1.16
CXCL12-204ENST00000395793 BTBD19C9JJ37 291 aa22.26■■□□□ 1.15
CXCL12-204ENST00000395793 CETPP11597 493 aa22.26■■□□□ 1.15
CXCL12-204ENST00000395793 MCAMP43121 646 aa22.26■■□□□ 1.15
CXCL12-204ENST00000395793 BTDP43251 543 aa22.26■■□□□ 1.15
CXCL12-204ENST00000395793 SPATA5Q8NB90 893 aa22.26■■□□□ 1.15
CXCL12-204ENST00000395793 PDE4DIPQ5VU43 2346 aa22.26■■□□□ 1.15
CXCL12-204ENST00000395793 DOCK1Q14185 1865 aa22.26■■□□□ 1.15
CXCL12-204ENST00000395793 PHIPQ8WWQ0 1821 aa22.25■■□□□ 1.15
CXCL12-204ENST00000395793 ENTPD3O75355 529 aa22.25■■□□□ 1.15
CXCL12-204ENST00000395793 RHBDL3P58872 404 aa22.25■■□□□ 1.15
CXCL12-204ENST00000395793 ATP8B2P98198 1209 aa22.25■■□□□ 1.15
CXCL12-204ENST00000395793 PPATQ06203 517 aa22.25■■□□□ 1.15
CXCL12-204ENST00000395793 SNAPC2Q13487 334 aa22.25■■□□□ 1.15
CXCL12-204ENST00000395793 NOL9Q5SY16 702 aaKnown RBP22.25■■□□□ 1.15
CXCL12-204ENST00000395793 SPTY2D1Q68D10 685 aaPredicted RBP22.25■■□□□ 1.15
CXCL12-204ENST00000395793 ERICH6Q7L0X2 663 aa22.25■■□□□ 1.15
CXCL12-204ENST00000395793 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms