RNA–Protein interactions for RNA: ENST00000395422.3

CHCHD2-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD2, Length 901 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD2-201ENST00000395422 NKX2-3Q8TAU0 364 aa17.07■□□□□ 0.32
CHCHD2-201ENST00000395422 DLL1O00548 723 aa17.06■□□□□ 0.32
CHCHD2-201ENST00000395422 SOX1O00570 391 aaPredicted RBP17.06■□□□□ 0.32
CHCHD2-201ENST00000395422 EXOSC9Q06265 439 aaKnown RBP17.06■□□□□ 0.32
CHCHD2-201ENST00000395422 LRRC24Q50LG9 513 aa17.06■□□□□ 0.32
CHCHD2-201ENST00000395422 FKBP1CQ5VVH2 108 aa17.06■□□□□ 0.32
CHCHD2-201ENST00000395422 VPS37DQ86XT2 251 aa17.06■□□□□ 0.32
CHCHD2-201ENST00000395422 TBC1D22AQ8WUA7 517 aa17.06■□□□□ 0.32
CHCHD2-201ENST00000395422 HTATIP2Q9BUP3 242 aa17.06■□□□□ 0.32
CHCHD2-201ENST00000395422 ZNF341Q9BYN7 854 aa17.06■□□□□ 0.32
CHCHD2-201ENST00000395422 RNF208Q9H0X6 261 aa17.06■□□□□ 0.32
CHCHD2-201ENST00000395422 C9orf78Q9NZ63 289 aaPredicted RBP17.06■□□□□ 0.32
CHCHD2-201ENST00000395422 KCNH4Q9UQ05 1017 aa17.06■□□□□ 0.32
CHCHD2-201ENST00000395422 RPAP1Q9BWH6 1393 aaPredicted RBP17.05■□□□□ 0.32
CHCHD2-201ENST00000395422 MROH5Q6ZUA9 1318 aa17.05■□□□□ 0.32
CHCHD2-201ENST00000395422 ZBTB7BO15156 539 aaPredicted RBP17.05■□□□□ 0.32
CHCHD2-201ENST00000395422 HOXD10P28358 340 aa17.05■□□□□ 0.32
CHCHD2-201ENST00000395422 BCAMP50895 628 aa17.05■□□□□ 0.32
CHCHD2-201ENST00000395422 DCAF15Q66K64 600 aa17.05■□□□□ 0.32
CHCHD2-201ENST00000395422 VGLL2Q8N8G2 317 aa17.05■□□□□ 0.32
CHCHD2-201ENST00000395422 SLC17A8Q8NDX2 589 aa17.05■□□□□ 0.32
CHCHD2-201ENST00000395422 U2AF1L4Q8WU68 220 aaKnown RBP17.05■□□□□ 0.32
CHCHD2-201ENST00000395422 MRIQ9BWK5 157 aa17.05■□□□□ 0.32
CHCHD2-201ENST00000395422 TMOD2Q9NZR1 351 aa17.05■□□□□ 0.32
CHCHD2-201ENST00000395422 BCRP11274 1271 aa17.04■□□□□ 0.32
CHCHD2-201ENST00000395422 GPAT2Q6NUI2 795 aa17.04■□□□□ 0.32
CHCHD2-201ENST00000395422 HOOK2Q96ED9 719 aa17.04■□□□□ 0.32
CHCHD2-201ENST00000395422 UNC93B1Q9H1C4 597 aa17.04■□□□□ 0.32
CHCHD2-201ENST00000395422 ZNF112Q9UJU3 913 aa17.04■□□□□ 0.32
CHCHD2-201ENST00000395422 GABRQQ9UN88 632 aa17.04■□□□□ 0.32
CHCHD2-201ENST00000395422 FRAT2O75474 233 aaPredicted RBP17.03■□□□□ 0.32
CHCHD2-201ENST00000395422 FARP2O94887 1054 aaPredicted RBP17.03■□□□□ 0.32
CHCHD2-201ENST00000395422 NBPF7P0C2Y1 421 aaPredicted RBP17.03■□□□□ 0.32
CHCHD2-201ENST00000395422 CYP2C8P10632 490 aa17.03■□□□□ 0.32
CHCHD2-201ENST00000395422 LRCH3Q96II8 777 aa17.03■□□□□ 0.32
CHCHD2-201ENST00000395422 BIN2Q9UBW5 565 aaPredicted RBP17.03■□□□□ 0.32
CHCHD2-201ENST00000395422 ALDH1L1O75891 902 aa17.02■□□□□ 0.32
CHCHD2-201ENST00000395422 UBXN2AP68543 259 aa17.02■□□□□ 0.32
CHCHD2-201ENST00000395422 NFIAQ12857 509 aa17.02■□□□□ 0.32
CHCHD2-201ENST00000395422 CAVIN4Q5BKX8 364 aa17.02■□□□□ 0.32
CHCHD2-201ENST00000395422 METTL24Q5JXM2 366 aa17.02■□□□□ 0.32
CHCHD2-201ENST00000395422 HHIPL2Q6UWX4 724 aa17.02■□□□□ 0.32
CHCHD2-201ENST00000395422 BICC1Q9H694 974 aaKnown RBP17.02■□□□□ 0.32
CHCHD2-201ENST00000395422 SPINK5Q9NQ38 1064 aaPredicted RBP17.02■□□□□ 0.32
CHCHD2-201ENST00000395422 NR2E3Q9Y5X4 410 aa17.02■□□□□ 0.32
CHCHD2-201ENST00000395422 PDE8BO95263 885 aa17.01■□□□□ 0.31
CHCHD2-201ENST00000395422 SGPL1O95470 568 aa17.01■□□□□ 0.31
CHCHD2-201ENST00000395422 TCP10Q12799 353 aa17.01■□□□□ 0.31
CHCHD2-201ENST00000395422 NOL9Q5SY16 702 aaKnown RBP17.01■□□□□ 0.31
CHCHD2-201ENST00000395422 SLC4A10Q6U841 1118 aa17.01■□□□□ 0.31
CHCHD2-201ENST00000395422 SLAIN1Q8ND83 568 aa17.01■□□□□ 0.31
CHCHD2-201ENST00000395422 FAM151AQ8WW52 585 aa17.01■□□□□ 0.31
CHCHD2-201ENST00000395422 SRCIN1Q9C0H9 1055 aa17.01■□□□□ 0.31
CHCHD2-201ENST00000395422 SUGT1Q9Y2Z0 365 aa17.01■□□□□ 0.31
CHCHD2-201ENST00000395422 FCGRTP55899 365 aa17■□□□□ 0.31
CHCHD2-201ENST00000395422 RABL6Q3YEC7 729 aaPredicted RBP17■□□□□ 0.31
CHCHD2-201ENST00000395422 ANKRD44Q8N8A2 993 aa17■□□□□ 0.31
CHCHD2-201ENST00000395422 KLHDC4Q8TBB5 520 aa17■□□□□ 0.31
CHCHD2-201ENST00000395422 PARK7Q99497 189 aaKnown RBP17■□□□□ 0.31
CHCHD2-201ENST00000395422 SALL2Q9Y467 1007 aaPredicted RBP17■□□□□ 0.31
CHCHD2-201ENST00000395422 UTYO14607 1347 aa16.99■□□□□ 0.31
CHCHD2-201ENST00000395422 MAST3O60307 1309 aa16.99■□□□□ 0.31
CHCHD2-201ENST00000395422 ELNP15502 786 aa16.99■□□□□ 0.31
CHCHD2-201ENST00000395422 FGFR2P21802 821 aa16.99■□□□□ 0.31
CHCHD2-201ENST00000395422 DIXDC1Q155Q3 683 aa16.99■□□□□ 0.31
CHCHD2-201ENST00000395422 NCBP3Q53F19 620 aaKnown RBP16.99■□□□□ 0.31
CHCHD2-201ENST00000395422 CDC42EP5Q6NZY7 148 aa16.99■□□□□ 0.31
CHCHD2-201ENST00000395422 ZFPM1Q8IX07 1006 aa16.99■□□□□ 0.31
CHCHD2-201ENST00000395422 FAM198AQ9UFP1 575 aa16.99■□□□□ 0.31
CHCHD2-201ENST00000395422 STAP2Q9UGK3 403 aa16.99■□□□□ 0.31
CHCHD2-201ENST00000395422 DAGLAQ9Y4D2 1042 aa16.99■□□□□ 0.31
CHCHD2-201ENST00000395422 A0A1W2PPC1 479 aa16.98■□□□□ 0.31
CHCHD2-201ENST00000395422 ADCY3O60266 1144 aa16.98■□□□□ 0.31
CHCHD2-201ENST00000395422 EVI5O60447 810 aa16.98■□□□□ 0.31
CHCHD2-201ENST00000395422 INHAP05111 366 aa16.98■□□□□ 0.31
CHCHD2-201ENST00000395422 FLT3LGP49771 235 aa16.98■□□□□ 0.31
CHCHD2-201ENST00000395422 ATRNL1Q5VV63 1379 aa16.98■□□□□ 0.31
CHCHD2-201ENST00000395422 CXCL11O14625 94 aa16.97■□□□□ 0.31
CHCHD2-201ENST00000395422 WDR63Q8IWG1 891 aa16.97■□□□□ 0.31
CHCHD2-201ENST00000395422 DEFB118Q96PH6 123 aa16.97■□□□□ 0.31
CHCHD2-201ENST00000395422 A0A0G2JLL6 359 aaPredicted RBP16.96■□□□□ 0.31
CHCHD2-201ENST00000395422 PHF20L1A8MW92 1017 aa16.96■□□□□ 0.31
CHCHD2-201ENST00000395422 SLURP2P0DP57 97 aa16.96■□□□□ 0.31
CHCHD2-201ENST00000395422 PRDX5P30044 214 aa16.96■□□□□ 0.31
CHCHD2-201ENST00000395422 PRRT2Q7Z6L0 340 aaPredicted RBP16.96■□□□□ 0.31
CHCHD2-201ENST00000395422 PAK6Q9NQU5 681 aaPredicted RBP16.96■□□□□ 0.31
CHCHD2-201ENST00000395422 KIF16BQ96L93 1317 aa16.96■□□□□ 0.3
CHCHD2-201ENST00000395422 TFRCP02786 760 aaKnown RBP16.95■□□□□ 0.3
CHCHD2-201ENST00000395422 PUM3Q15397 648 aaKnown RBP16.95■□□□□ 0.3
CHCHD2-201ENST00000395422 DIS3LQ8TF46 1054 aaKnown RBP16.95■□□□□ 0.3
CHCHD2-201ENST00000395422 PAWRQ96IZ0 340 aaKnown RBP16.95■□□□□ 0.3
CHCHD2-201ENST00000395422 CRISPLD2Q9H0B8 497 aa16.95■□□□□ 0.3
CHCHD2-201ENST00000395422 ZHX2Q9Y6X8 837 aa16.95■□□□□ 0.3
CHCHD2-201ENST00000395422 IFIT1P09914 478 aaKnown RBP16.94■□□□□ 0.3
CHCHD2-201ENST00000395422 PTPRAP18433 802 aa16.94■□□□□ 0.3
CHCHD2-201ENST00000395422 IRF5Q13568 498 aa16.94■□□□□ 0.3
CHCHD2-201ENST00000395422 WDR66Q8TBY9 1149 aa16.94■□□□□ 0.3
CHCHD2-201ENST00000395422 PXYLP1Q8TE99 480 aa16.94■□□□□ 0.3
CHCHD2-201ENST00000395422 USP40Q9NVE5 1235 aa16.94■□□□□ 0.3
CHCHD2-201ENST00000395422 TNPO2O14787 897 aaKnown RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms