RNA–Protein interactions for RNA: ENST00000395358.7

RAPGEF3-202, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-202ENST00000395358 SURF6O75683 361 aaKnown RBP12.94□□□□□ -0.34
RAPGEF3-202ENST00000395358 HSPA4P34932 840 aa12.94□□□□□ -0.34
RAPGEF3-202ENST00000395358 SIK1P57059 783 aa12.94□□□□□ -0.34
RAPGEF3-202ENST00000395358 G2E3Q7L622 706 aa12.94□□□□□ -0.34
RAPGEF3-202ENST00000395358 INTS4Q96HW7 963 aaKnown RBP12.94□□□□□ -0.34
RAPGEF3-202ENST00000395358 NFAT5O94916 1531 aa12.94□□□□□ -0.34
RAPGEF3-202ENST00000395358 APBA3O96018 575 aa12.94□□□□□ -0.34
RAPGEF3-202ENST00000395358 CYP2E1P05181 493 aaPredicted RBP12.94□□□□□ -0.34
RAPGEF3-202ENST00000395358 SDSP20132 328 aa12.94□□□□□ -0.34
RAPGEF3-202ENST00000395358 STX1AQ16623 288 aa12.94□□□□□ -0.34
RAPGEF3-202ENST00000395358 CC2D1AQ6P1N0 951 aaPredicted RBP12.94□□□□□ -0.34
RAPGEF3-202ENST00000395358 DZIP3Q86Y13 1208 aaKnown RBP12.94□□□□□ -0.34
RAPGEF3-202ENST00000395358 BCAS4Q8TDM0 211 aa12.94□□□□□ -0.34
RAPGEF3-202ENST00000395358 ZEB2O60315 1214 aa12.94□□□□□ -0.34
RAPGEF3-202ENST00000395358 GPTP24298 496 aa12.94□□□□□ -0.34
RAPGEF3-202ENST00000395358 LTBP4Q8N2S1 1624 aa12.94□□□□□ -0.34
RAPGEF3-202ENST00000395358 PLEKHG2Q9H7P9 1386 aa12.94□□□□□ -0.34
RAPGEF3-202ENST00000395358 PHLPP1O60346 1717 aa12.94□□□□□ -0.34
RAPGEF3-202ENST00000395358 WDHD1O75717 1129 aaPredicted RBP12.93□□□□□ -0.34
RAPGEF3-202ENST00000395358 SYT1P21579 422 aa12.93□□□□□ -0.34
RAPGEF3-202ENST00000395358 NUTM1Q86Y26 1132 aa12.93□□□□□ -0.34
RAPGEF3-202ENST00000395358 CWC25Q9NXE8 425 aaPredicted RBP12.93□□□□□ -0.34
RAPGEF3-202ENST00000395358 TBC1D2BQ9UPU7 963 aa12.93□□□□□ -0.34
RAPGEF3-202ENST00000395358 ALDH1L1O75891 902 aa12.93□□□□□ -0.34
RAPGEF3-202ENST00000395358 SWT1Q5T5J6 900 aaKnown RBP12.93□□□□□ -0.34
RAPGEF3-202ENST00000395358 JMYQ8N9B5 988 aa12.93□□□□□ -0.34
RAPGEF3-202ENST00000395358 LINS1Q8NG48 757 aa12.93□□□□□ -0.34
RAPGEF3-202ENST00000395358 SAAL1Q96ER3 474 aa12.93□□□□□ -0.34
RAPGEF3-202ENST00000395358 CCDC87Q9NVE4 849 aa12.93□□□□□ -0.34
RAPGEF3-202ENST00000395358 B4GALNT4Q76KP1 1039 aa12.93□□□□□ -0.34
RAPGEF3-202ENST00000395358 AOPEPQ8N6M6 819 aa12.93□□□□□ -0.34
RAPGEF3-202ENST00000395358 TRMT112Q9UI30 125 aaKnown RBP12.93□□□□□ -0.34
RAPGEF3-202ENST00000395358 TRIM37O94972 964 aa12.93□□□□□ -0.34
RAPGEF3-202ENST00000395358 ATRIPQ8WXE1 791 aa12.93□□□□□ -0.34
RAPGEF3-202ENST00000395358 CAMTA1Q9Y6Y1 1673 aa12.92□□□□□ -0.34
RAPGEF3-202ENST00000395358 ZKSCAN1P17029 563 aaPredicted RBP12.92□□□□□ -0.34
RAPGEF3-202ENST00000395358 GJB2P29033 226 aa12.92□□□□□ -0.34
RAPGEF3-202ENST00000395358 ACTN3Q08043 901 aaPredicted RBP12.92□□□□□ -0.34
RAPGEF3-202ENST00000395358 MARCH10Q8NA82 808 aaPredicted RBP12.92□□□□□ -0.34
RAPGEF3-202ENST00000395358 UTP14AQ9BVJ6 771 aaKnown RBP12.92□□□□□ -0.34
RAPGEF3-202ENST00000395358 FAM169AQ9Y6X4 670 aa12.92□□□□□ -0.34
RAPGEF3-202ENST00000395358 MEGF6O75095 1541 aa12.92□□□□□ -0.34
RAPGEF3-202ENST00000395358 ENO4A6NNW6 628 aa12.92□□□□□ -0.34
RAPGEF3-202ENST00000395358 GNPATO15228 680 aa12.92□□□□□ -0.34
RAPGEF3-202ENST00000395358 KIF5CO60282 957 aa12.92□□□□□ -0.34
RAPGEF3-202ENST00000395358 DTNBO60941 627 aa12.92□□□□□ -0.34
RAPGEF3-202ENST00000395358 TOP1P11387 765 aaKnown RBP12.92□□□□□ -0.34
RAPGEF3-202ENST00000395358 BRD3Q15059 726 aa12.92□□□□□ -0.34
RAPGEF3-202ENST00000395358 ARMCX6Q7L4S7 300 aa12.92□□□□□ -0.34
RAPGEF3-202ENST00000395358 PARD6BQ9BYG5 372 aa12.92□□□□□ -0.34
RAPGEF3-202ENST00000395358 G3BP2Q9UN86 482 aaKnown RBP12.92□□□□□ -0.34
RAPGEF3-202ENST00000395358 STRCP1A6NGW2 1772 aa12.92□□□□□ -0.34
RAPGEF3-202ENST00000395358 H2AFXP16104 143 aaPredicted RBP12.92□□□□□ -0.34
RAPGEF3-202ENST00000395358 CCDC57Q2TAC2 916 aa12.92□□□□□ -0.34
RAPGEF3-202ENST00000395358 RWDD2BP57060 319 aa12.91□□□□□ -0.34
RAPGEF3-202ENST00000395358 C16orf71Q8IYS4 520 aaPredicted RBP12.91□□□□□ -0.34
RAPGEF3-202ENST00000395358 SPDL1Q96EA4 605 aa12.91□□□□□ -0.34
RAPGEF3-202ENST00000395358 HEG1Q9ULI3 1381 aa12.91□□□□□ -0.34
RAPGEF3-202ENST00000395358 IFIT2P09913 472 aaKnown RBP12.91□□□□□ -0.34
RAPGEF3-202ENST00000395358 GCFC2P16383 781 aaKnown RBP12.91□□□□□ -0.34
RAPGEF3-202ENST00000395358 RANBP1P43487 201 aa12.91□□□□□ -0.34
RAPGEF3-202ENST00000395358 CHMP4BP1P59074 171 aa12.91□□□□□ -0.34
RAPGEF3-202ENST00000395358 APOBRQ0VD83 1088 aa12.91□□□□□ -0.34
RAPGEF3-202ENST00000395358 NKX1-1Q15270 411 aaPredicted RBP12.91□□□□□ -0.34
RAPGEF3-202ENST00000395358 CCDC121Q6ZUS5 278 aa12.91□□□□□ -0.34
RAPGEF3-202ENST00000395358 PLBD2Q8NHP8 589 aa12.91□□□□□ -0.34
RAPGEF3-202ENST00000395358 TFCP2L1Q9NZI6 479 aa12.91□□□□□ -0.34
RAPGEF3-202ENST00000395358 DBN1Q16643 649 aa12.91□□□□□ -0.34
RAPGEF3-202ENST00000395358 FOXR1Q6PIV2 292 aa12.91□□□□□ -0.34
RAPGEF3-202ENST00000395358 TACO1Q9BSH4 297 aaKnown RBP12.91□□□□□ -0.34
RAPGEF3-202ENST00000395358 ZBTB40Q9NUA8 1239 aa12.91□□□□□ -0.34
RAPGEF3-202ENST00000395358 ARHGAP25P42331 645 aa12.9□□□□□ -0.34
RAPGEF3-202ENST00000395358 ME1P48163 572 aa12.9□□□□□ -0.34
RAPGEF3-202ENST00000395358 UBE3BQ7Z3V4 1068 aa12.9□□□□□ -0.34
RAPGEF3-202ENST00000395358 PPP1R42Q7Z4L9 355 aa12.9□□□□□ -0.34
RAPGEF3-202ENST00000395358 FAM71BQ8TC56 605 aa12.9□□□□□ -0.34
RAPGEF3-202ENST00000395358 PSD3Q9NYI0 1048 aa12.9□□□□□ -0.34
RAPGEF3-202ENST00000395358 SAMM50Q9Y512 469 aa12.9□□□□□ -0.34
RAPGEF3-202ENST00000395358 GOLGA6L9A6NEM1 432 aa12.9□□□□□ -0.34
RAPGEF3-202ENST00000395358 CBFA2T2O43439 604 aa12.9□□□□□ -0.34
RAPGEF3-202ENST00000395358 KARSQ15046 597 aaKnown RBP12.9□□□□□ -0.34
RAPGEF3-202ENST00000395358 PPP1R13BQ96KQ4 1090 aa12.9□□□□□ -0.34
RAPGEF3-202ENST00000395358 ATG3Q9NT62 314 aa12.9□□□□□ -0.34
RAPGEF3-202ENST00000395358 LIMCH1Q9UPQ0 1083 aa12.9□□□□□ -0.34
RAPGEF3-202ENST00000395358 BUB1BO60566 1050 aaPredicted RBP12.9□□□□□ -0.34
RAPGEF3-202ENST00000395358 CCDC144BQ3MJ40 725 aa12.9□□□□□ -0.34
RAPGEF3-202ENST00000395358 TRAPPC3LQ5T215 181 aa12.9□□□□□ -0.34
RAPGEF3-202ENST00000395358 CCDC144CPQ8IYA2 1237 aa12.9□□□□□ -0.34
RAPGEF3-202ENST00000395358 CLASRPQ8N2M8 674 aaKnown RBP12.9□□□□□ -0.34
RAPGEF3-202ENST00000395358 MIEF2Q96C03 454 aa12.9□□□□□ -0.34
RAPGEF3-202ENST00000395358 IFNKQ9P0W0 207 aa12.9□□□□□ -0.34
RAPGEF3-202ENST00000395358 CTAGE15A4D2H0 777 aa12.89□□□□□ -0.35
RAPGEF3-202ENST00000395358 CTAGE8P0CG41 777 aa12.89□□□□□ -0.35
RAPGEF3-202ENST00000395358 BAG6P46379 1132 aa12.89□□□□□ -0.35
RAPGEF3-202ENST00000395358 NFXL1Q6ZNB6 911 aa12.89□□□□□ -0.35
RAPGEF3-202ENST00000395358 CTAGE6Q86UF2 777 aa12.89□□□□□ -0.35
RAPGEF3-202ENST00000395358 CTAGE4Q8IX94 777 aa12.89□□□□□ -0.35
RAPGEF3-202ENST00000395358 CCDC148Q8NFR7 591 aa12.89□□□□□ -0.35
RAPGEF3-202ENST00000395358 ZBTB10Q96DT7 871 aa12.89□□□□□ -0.35
RAPGEF3-202ENST00000395358 MEIS3Q99687 375 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms