RNA–Protein interactions for RNA: ENST00000395194.1

COL11A2-204, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 1 (best) BASIC

Gene COL11A2, Length 1,194 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-204ENST00000395194 PTPN22Q9Y2R2 807 aa23.99■■□□□ 1.43
COL11A2-204ENST00000395194 CIAO1O76071 339 aa23.98■■□□□ 1.43
COL11A2-204ENST00000395194 FKBP1CQ5VVH2 108 aa23.98■■□□□ 1.43
COL11A2-204ENST00000395194 ZFYVE28Q9HCC9 887 aa23.98■■□□□ 1.43
COL11A2-204ENST00000395194 RPAP1Q9BWH6 1393 aaPredicted RBP23.98■■□□□ 1.43
COL11A2-204ENST00000395194 CT47B1P0C2W7 299 aaPredicted RBP23.97■■□□□ 1.43
COL11A2-204ENST00000395194 ADORA1P30542 326 aa23.97■■□□□ 1.43
COL11A2-204ENST00000395194 NFIAQ12857 509 aa23.97■■□□□ 1.43
COL11A2-204ENST00000395194 CDC42EP5Q6NZY7 148 aa23.97■■□□□ 1.43
COL11A2-204ENST00000395194 ERO1BQ86YB8 467 aa23.97■■□□□ 1.43
COL11A2-204ENST00000395194 GNL3LQ9NVN8 582 aaKnown RBP23.97■■□□□ 1.43
COL11A2-204ENST00000395194 POTEFA5A3E0 1075 aa23.96■■□□□ 1.43
COL11A2-204ENST00000395194 IRF6O14896 467 aa23.96■■□□□ 1.43
COL11A2-204ENST00000395194 LDHBP07195 334 aaKnown RBP23.96■■□□□ 1.43
COL11A2-204ENST00000395194 INPP5BP32019 993 aa23.96■■□□□ 1.43
COL11A2-204ENST00000395194 DCAF15Q66K64 600 aa23.96■■□□□ 1.43
COL11A2-204ENST00000395194 ZNF341Q9BYN7 854 aa23.96■■□□□ 1.43
COL11A2-204ENST00000395194 FBXO3Q9UK99 471 aa23.96■■□□□ 1.43
COL11A2-204ENST00000395194 DOCK2Q92608 1830 aa23.96■■□□□ 1.43
COL11A2-204ENST00000395194 IL15P40933 162 aaPredicted RBP23.95■■□□□ 1.42
COL11A2-204ENST00000395194 RARSP54136 660 aaKnown RBP23.95■■□□□ 1.42
COL11A2-204ENST00000395194 HOOK2Q96ED9 719 aa23.95■■□□□ 1.42
COL11A2-204ENST00000395194 RBBP6Q7Z6E9 1792 aaKnown RBP23.95■■□□□ 1.42
COL11A2-204ENST00000395194 ECM2O94769 699 aaPredicted RBP23.94■■□□□ 1.42
COL11A2-204ENST00000395194 CETPP11597 493 aa23.94■■□□□ 1.42
COL11A2-204ENST00000395194 PRPF38BQ5VTL8 546 aaKnown RBP23.94■■□□□ 1.42
COL11A2-204ENST00000395194 FAM151AQ8WW52 585 aa23.94■■□□□ 1.42
COL11A2-204ENST00000395194 DENND2AQ9ULE3 1009 aa23.94■■□□□ 1.42
COL11A2-204ENST00000395194 BTBD19C9JJ37 291 aa23.93■■□□□ 1.42
COL11A2-204ENST00000395194 PPIL2Q13356 520 aa23.93■■□□□ 1.42
COL11A2-204ENST00000395194 SNAPC2Q13487 334 aa23.93■■□□□ 1.42
COL11A2-204ENST00000395194 USP40Q9NVE5 1235 aa23.93■■□□□ 1.42
COL11A2-204ENST00000395194 CCDC102BQ68D86 513 aa23.92■■□□□ 1.42
COL11A2-204ENST00000395194 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.92■■□□□ 1.42
COL11A2-204ENST00000395194 COPRSQ9NQ92 184 aa23.92■■□□□ 1.42
COL11A2-204ENST00000395194 FAM198AQ9UFP1 575 aa23.92■■□□□ 1.42
COL11A2-204ENST00000395194 TIMM10P62072 90 aa23.91■■□□□ 1.42
COL11A2-204ENST00000395194 INTS3Q68E01 1043 aaKnown RBP23.91■■□□□ 1.42
COL11A2-204ENST00000395194 ZFPM1Q8IX07 1006 aa23.91■■□□□ 1.42
COL11A2-204ENST00000395194 ARHGAP39Q9C0H5 1083 aa23.91■■□□□ 1.42
COL11A2-204ENST00000395194 HDAC5Q9UQL6 1122 aa23.91■■□□□ 1.42
COL11A2-204ENST00000395194 TNNQ9UQP3 1299 aa23.91■■□□□ 1.42
COL11A2-204ENST00000395194 PTCH2Q9Y6C5 1203 aa23.91■■□□□ 1.42
COL11A2-204ENST00000395194 SALL1Q9NSC2 1324 aa23.9■■□□□ 1.42
COL11A2-204ENST00000395194 ABCF2Q9UG63 623 aa23.9■■□□□ 1.42
COL11A2-204ENST00000395194 CCER2I3L3R5 266 aa23.89■■□□□ 1.41
COL11A2-204ENST00000395194 SEMA3EO15041 775 aa23.89■■□□□ 1.41
COL11A2-204ENST00000395194 SRGAP3O43295 1099 aa23.89■■□□□ 1.41
COL11A2-204ENST00000395194 WDHD1O75717 1129 aaPredicted RBP23.89■■□□□ 1.41
COL11A2-204ENST00000395194 TFCP2Q12800 502 aa23.89■■□□□ 1.41
COL11A2-204ENST00000395194 RASGRF1Q13972 1273 aa23.89■■□□□ 1.41
COL11A2-204ENST00000395194 ARMC5Q96C12 935 aa23.89■■□□□ 1.41
COL11A2-204ENST00000395194 A0A1B0GUL7 405 aa23.88■■□□□ 1.41
COL11A2-204ENST00000395194 TLR2O60603 784 aa23.88■■□□□ 1.41
COL11A2-204ENST00000395194 MYCP01106 439 aaPredicted RBP23.88■■□□□ 1.41
COL11A2-204ENST00000395194 PPATQ06203 517 aa23.88■■□□□ 1.41
COL11A2-204ENST00000395194 DZIP1Q86YF9 867 aaKnown RBP23.88■■□□□ 1.41
COL11A2-204ENST00000395194 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.88■■□□□ 1.41
COL11A2-204ENST00000395194 GNAI3P08754 354 aa23.87■■□□□ 1.41
COL11A2-204ENST00000395194 RGS3P49796 1198 aa23.87■■□□□ 1.41
COL11A2-204ENST00000395194 SLC9C1Q4G0N8 1177 aa23.87■■□□□ 1.41
COL11A2-204ENST00000395194 XAGE2Q96GT9 111 aa23.87■■□□□ 1.41
COL11A2-204ENST00000395194 ZNF112Q9UJU3 913 aa23.87■■□□□ 1.41
COL11A2-204ENST00000395194 EN2P19622 333 aaPredicted RBP23.86■■□□□ 1.41
COL11A2-204ENST00000395194 ARHGEF6Q15052 776 aa23.86■■□□□ 1.41
COL11A2-204ENST00000395194 ZGPATQ8N5A5 531 aaKnown RBP23.86■■□□□ 1.41
COL11A2-204ENST00000395194 FRAT1Q92837 279 aaPredicted RBP23.86■■□□□ 1.41
COL11A2-204ENST00000395194 CPA4Q9UI42 421 aa23.86■■□□□ 1.41
COL11A2-204ENST00000395194 BCAR3O75815 825 aa23.85■■□□□ 1.41
COL11A2-204ENST00000395194 SLURP2P0DP57 97 aa23.85■■□□□ 1.41
COL11A2-204ENST00000395194 TRIM27P14373 513 aa23.85■■□□□ 1.41
COL11A2-204ENST00000395194 LACTBP83111 547 aaPredicted RBP23.85■■□□□ 1.41
COL11A2-204ENST00000395194 KIF22Q14807 665 aa23.85■■□□□ 1.41
COL11A2-204ENST00000395194 ZSCAN29Q8IWY8 852 aaPredicted RBP23.85■■□□□ 1.41
COL11A2-204ENST00000395194 ARHGAP45Q92619 1136 aa23.85■■□□□ 1.41
COL11A2-204ENST00000395194 CLUAP1Q96AJ1 413 aa23.85■■□□□ 1.41
COL11A2-204ENST00000395194 ZNF333Q96JL9 665 aa23.85■■□□□ 1.41
COL11A2-204ENST00000395194 NEUROD6Q96NK8 337 aa23.85■■□□□ 1.41
COL11A2-204ENST00000395194 ZCCHC17Q9NP64 241 aaKnown RBP23.85■■□□□ 1.41
COL11A2-204ENST00000395194 GAKO14976 1311 aa23.84■■□□□ 1.41
COL11A2-204ENST00000395194 PTPRFP10586 1907 aa23.84■■□□□ 1.41
COL11A2-204ENST00000395194 PICALMQ13492 652 aa23.84■■□□□ 1.41
COL11A2-204ENST00000395194 TMEM106CQ9BVX2 250 aa23.84■■□□□ 1.41
COL11A2-204ENST00000395194 KCNH4Q9UQ05 1017 aa23.84■■□□□ 1.41
COL11A2-204ENST00000395194 DOCK1Q14185 1865 aa23.83■■□□□ 1.41
COL11A2-204ENST00000395194 ATRNL1Q5VV63 1379 aa23.83■■□□□ 1.41
COL11A2-204ENST00000395194 PDHXO00330 501 aa23.83■■□□□ 1.41
COL11A2-204ENST00000395194 BTDP43251 543 aa23.83■■□□□ 1.41
COL11A2-204ENST00000395194 NOL9Q5SY16 702 aaKnown RBP23.83■■□□□ 1.41
COL11A2-204ENST00000395194 SH3TC2Q8TF17 1288 aa23.83■■□□□ 1.41
COL11A2-204ENST00000395194 AKAP2Q9Y2D5 859 aa23.83■■□□□ 1.41
COL11A2-204ENST00000395194 RFX7Q2KHR2 1363 aa23.82■■□□□ 1.4
COL11A2-204ENST00000395194 MTX1Q13505 466 aa23.82■■□□□ 1.4
COL11A2-204ENST00000395194 MVPQ14764 893 aaKnown RBP23.82■■□□□ 1.4
COL11A2-204ENST00000395194 PI16Q6UXB8 463 aa23.82■■□□□ 1.4
COL11A2-204ENST00000395194 SH3BP5LQ7L8J4 393 aa23.82■■□□□ 1.4
COL11A2-204ENST00000395194 ANKRD23Q86SG2 305 aa23.82■■□□□ 1.4
COL11A2-204ENST00000395194 IDI2Q9BXS1 227 aa23.82■■□□□ 1.4
COL11A2-204ENST00000395194 DDX4Q9NQI0 724 aaKnown RBP23.82■■□□□ 1.4
COL11A2-204ENST00000395194 MGAMO43451 1857 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 427 ms