RNA–Protein interactions for RNA: ENST00000394849.1

UPK3B-203, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 1,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-203ENST00000394849 ZSWIM8A7E2V4 1837 aa24.79■■□□□ 1.56
UPK3B-203ENST00000394849 PDE8BO95263 885 aa24.79■■□□□ 1.56
UPK3B-203ENST00000394849 GRK4P32298 578 aa24.79■■□□□ 1.56
UPK3B-203ENST00000394849 TRIM47Q96LD4 638 aa24.79■■□□□ 1.56
UPK3B-203ENST00000394849 FMNL1O95466 1100 aaPredicted RBP24.78■■□□□ 1.56
UPK3B-203ENST00000394849 GJB1P08034 283 aa24.78■■□□□ 1.56
UPK3B-203ENST00000394849 CAPN2P17655 700 aa24.78■■□□□ 1.56
UPK3B-203ENST00000394849 GJA8P48165 433 aa24.78■■□□□ 1.56
UPK3B-203ENST00000394849 RABL6Q3YEC7 729 aaPredicted RBP24.78■■□□□ 1.56
UPK3B-203ENST00000394849 CHRDL2Q6WN34 429 aa24.78■■□□□ 1.56
UPK3B-203ENST00000394849 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.78■■□□□ 1.56
UPK3B-203ENST00000394849 KAZALD1Q96I82 304 aa24.78■■□□□ 1.56
UPK3B-203ENST00000394849 KCNH4Q9UQ05 1017 aa24.78■■□□□ 1.56
UPK3B-203ENST00000394849 PDHXO00330 501 aa24.77■■□□□ 1.56
UPK3B-203ENST00000394849 FAM151AQ8WW52 585 aa24.77■■□□□ 1.56
UPK3B-203ENST00000394849 SHISA4Q96DD7 197 aa24.77■■□□□ 1.56
UPK3B-203ENST00000394849 CPA4Q9UI42 421 aa24.77■■□□□ 1.56
UPK3B-203ENST00000394849 ZNF112Q9UJU3 913 aa24.77■■□□□ 1.56
UPK3B-203ENST00000394849 NR2E3Q9Y5X4 410 aa24.77■■□□□ 1.56
UPK3B-203ENST00000394849 IFIT1P09914 478 aaKnown RBP24.76■■□□□ 1.55
UPK3B-203ENST00000394849 OSBPP22059 807 aa24.76■■□□□ 1.55
UPK3B-203ENST00000394849 UBXN2AP68543 259 aa24.76■■□□□ 1.55
UPK3B-203ENST00000394849 MTFR1Q15390 333 aa24.76■■□□□ 1.55
UPK3B-203ENST00000394849 CCDC184Q52MB2 194 aa24.76■■□□□ 1.55
UPK3B-203ENST00000394849 VGLL2Q8N8G2 317 aa24.76■■□□□ 1.55
UPK3B-203ENST00000394849 SZT2Q5T011 3432 aa24.76■■□□□ 1.55
UPK3B-203ENST00000394849 RANBP2P49792 3224 aaKnown RBP24.76■■□□□ 1.55
UPK3B-203ENST00000394849 NBPF7P0C2Y1 421 aaPredicted RBP24.75■■□□□ 1.55
UPK3B-203ENST00000394849 BCAMP50895 628 aa24.75■■□□□ 1.55
UPK3B-203ENST00000394849 MIGA2Q7L4E1 593 aa24.75■■□□□ 1.55
UPK3B-203ENST00000394849 WDR66Q8TBY9 1149 aa24.75■■□□□ 1.55
UPK3B-203ENST00000394849 PARK7Q99497 189 aaKnown RBP24.75■■□□□ 1.55
UPK3B-203ENST00000394849 BICC1Q9H694 974 aaKnown RBP24.75■■□□□ 1.55
UPK3B-203ENST00000394849 MYPNQ86TC9 1320 aa24.75■■□□□ 1.55
UPK3B-203ENST00000394849 ADGRA2Q96PE1 1338 aa24.75■■□□□ 1.55
UPK3B-203ENST00000394849 CCL5P13501 91 aa24.74■■□□□ 1.55
UPK3B-203ENST00000394849 INPP5BP32019 993 aa24.74■■□□□ 1.55
UPK3B-203ENST00000394849 PUM3Q15397 648 aaKnown RBP24.74■■□□□ 1.55
UPK3B-203ENST00000394849 LRRC24Q50LG9 513 aa24.74■■□□□ 1.55
UPK3B-203ENST00000394849 UBE2Q1Q7Z7E8 422 aa24.74■■□□□ 1.55
UPK3B-203ENST00000394849 RBM27Q9P2N5 1060 aaKnown RBP24.74■■□□□ 1.55
UPK3B-203ENST00000394849 BIN2Q9UBW5 565 aaPredicted RBP24.74■■□□□ 1.55
UPK3B-203ENST00000394849 AK9Q5TCS8 1911 aa24.74■■□□□ 1.55
UPK3B-203ENST00000394849 CTGFP29279 349 aa24.73■■□□□ 1.55
UPK3B-203ENST00000394849 FCGRTP55899 365 aa24.73■■□□□ 1.55
UPK3B-203ENST00000394849 NOL9Q5SY16 702 aaKnown RBP24.73■■□□□ 1.55
UPK3B-203ENST00000394849 SLAIN1Q8ND83 568 aa24.73■■□□□ 1.55
UPK3B-203ENST00000394849 RNF208Q9H0X6 261 aa24.73■■□□□ 1.55
UPK3B-203ENST00000394849 CXCL11O14625 94 aa24.72■■□□□ 1.55
UPK3B-203ENST00000394849 MYH13Q9UKX3 1938 aa24.71■■□□□ 1.55
UPK3B-203ENST00000394849 SALL2Q9Y467 1007 aaPredicted RBP24.71■■□□□ 1.55
UPK3B-203ENST00000394849 A0A1W2PPC1 479 aa24.7■■□□□ 1.54
UPK3B-203ENST00000394849 MGAMO43451 1857 aa24.69■■□□□ 1.54
UPK3B-203ENST00000394849 BCRP11274 1271 aa24.69■■□□□ 1.54
UPK3B-203ENST00000394849 FGFR2P21802 821 aa24.69■■□□□ 1.54
UPK3B-203ENST00000394849 MOGSQ13724 837 aa24.69■■□□□ 1.54
UPK3B-203ENST00000394849 FASTKD5Q7L8L6 764 aaKnown RBP24.69■■□□□ 1.54
UPK3B-203ENST00000394849 ANKRD44Q8N8A2 993 aa24.69■■□□□ 1.54
UPK3B-203ENST00000394849 PRO3102Q9H379 93 aa24.69■■□□□ 1.54
UPK3B-203ENST00000394849 MRS2Q9HD23 443 aa24.69■■□□□ 1.54
UPK3B-203ENST00000394849 ECM2O94769 699 aaPredicted RBP24.68■■□□□ 1.54
UPK3B-203ENST00000394849 SLC5A1P13866 664 aa24.68■■□□□ 1.54
UPK3B-203ENST00000394849 U2AF1L4Q8WU68 220 aaKnown RBP24.68■■□□□ 1.54
UPK3B-203ENST00000394849 LPIN2Q92539 896 aa24.68■■□□□ 1.54
UPK3B-203ENST00000394849 FARP2O94887 1054 aaPredicted RBP24.67■■□□□ 1.54
UPK3B-203ENST00000394849 PRKCZQ05513 592 aa24.67■■□□□ 1.54
UPK3B-203ENST00000394849 TCP10Q12799 353 aa24.67■■□□□ 1.54
UPK3B-203ENST00000394849 CDC42EP5Q6NZY7 148 aa24.67■■□□□ 1.54
UPK3B-203ENST00000394849 SLC45A1Q9Y2W3 748 aa24.67■■□□□ 1.54
UPK3B-203ENST00000394849 DAGLAQ9Y4D2 1042 aa24.67■■□□□ 1.54
UPK3B-203ENST00000394849 SGPL1O95470 568 aa24.66■■□□□ 1.54
UPK3B-203ENST00000394849 SPINK5Q9NQ38 1064 aaPredicted RBP24.66■■□□□ 1.54
UPK3B-203ENST00000394849 ZBTB7BO15156 539 aaPredicted RBP24.65■■□□□ 1.54
UPK3B-203ENST00000394849 GPAT2Q6NUI2 795 aa24.65■■□□□ 1.54
UPK3B-203ENST00000394849 PXYLP1Q8TE99 480 aa24.65■■□□□ 1.54
UPK3B-203ENST00000394849 PICK1Q9NRD5 415 aa24.65■■□□□ 1.54
UPK3B-203ENST00000394849 GNL3LQ9NVN8 582 aaKnown RBP24.65■■□□□ 1.54
UPK3B-203ENST00000394849 PTPRCP08575 1304 aa24.64■■□□□ 1.54
UPK3B-203ENST00000394849 A0A0G2JLL6 359 aaPredicted RBP24.63■■□□□ 1.53
UPK3B-203ENST00000394849 EYA2O00167 538 aa24.63■■□□□ 1.53
UPK3B-203ENST00000394849 ADCY3O60266 1144 aa24.63■■□□□ 1.53
UPK3B-203ENST00000394849 LDHBP07195 334 aaKnown RBP24.63■■□□□ 1.53
UPK3B-203ENST00000394849 CYP2C8P10632 490 aa24.63■■□□□ 1.53
UPK3B-203ENST00000394849 NFIAQ12857 509 aa24.63■■□□□ 1.53
UPK3B-203ENST00000394849 IRF5Q13568 498 aa24.63■■□□□ 1.53
UPK3B-203ENST00000394849 PRRT2Q7Z6L0 340 aaPredicted RBP24.63■■□□□ 1.53
UPK3B-203ENST00000394849 KLHDC4Q8TBB5 520 aa24.63■■□□□ 1.53
UPK3B-203ENST00000394849 USP40Q9NVE5 1235 aa24.63■■□□□ 1.53
UPK3B-203ENST00000394849 FAM198AQ9UFP1 575 aa24.63■■□□□ 1.53
UPK3B-203ENST00000394849 EVI5O60447 810 aa24.62■■□□□ 1.53
UPK3B-203ENST00000394849 SCYL3Q8IZE3 742 aa24.62■■□□□ 1.53
UPK3B-203ENST00000394849 UNC93B1Q9H1C4 597 aa24.62■■□□□ 1.53
UPK3B-203ENST00000394849 FBXO3Q9UK99 471 aa24.62■■□□□ 1.53
UPK3B-203ENST00000394849 ZHX2Q9Y6X8 837 aa24.62■■□□□ 1.53
UPK3B-203ENST00000394849 SALL1Q9NSC2 1324 aa24.61■■□□□ 1.53
UPK3B-203ENST00000394849 SEMA3EO15041 775 aa24.61■■□□□ 1.53
UPK3B-203ENST00000394849 ENTPD3O75355 529 aa24.61■■□□□ 1.53
UPK3B-203ENST00000394849 DIXDC1Q155Q3 683 aa24.61■■□□□ 1.53
UPK3B-203ENST00000394849 GABRQQ9UN88 632 aa24.61■■□□□ 1.53
UPK3B-203ENST00000394849 PHF20L1A8MW92 1017 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms