RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 PFKFB2O60825 505 aa14.22□□□□□ -0.13
SLC28A1-203ENST00000394573 NBPF7P0C2Y1 421 aaPredicted RBP14.22□□□□□ -0.13
SLC28A1-203ENST00000394573 GUCY1B3Q02153 619 aa14.22□□□□□ -0.13
SLC28A1-203ENST00000394573 TROQ12816 1431 aaPredicted RBP14.22□□□□□ -0.13
SLC28A1-203ENST00000394573 HSP90AB2PQ58FF8 381 aa14.22□□□□□ -0.13
SLC28A1-203ENST00000394573 KIAA1328Q86T90 577 aa14.22□□□□□ -0.13
SLC28A1-203ENST00000394573 SLC35F6Q8N357 371 aa14.22□□□□□ -0.13
SLC28A1-203ENST00000394573 COG1Q8WTW3 980 aa14.22□□□□□ -0.13
SLC28A1-203ENST00000394573 USP28Q96RU2 1077 aa14.22□□□□□ -0.13
SLC28A1-203ENST00000394573 TSGA10Q9BZW7 698 aa14.22□□□□□ -0.13
SLC28A1-203ENST00000394573 HSD3B7Q9H2F3 369 aa14.22□□□□□ -0.13
SLC28A1-203ENST00000394573 KDM4CQ9H3R0 1056 aa14.22□□□□□ -0.13
SLC28A1-203ENST00000394573 MADDQ8WXG6 1647 aa14.21□□□□□ -0.13
SLC28A1-203ENST00000394573 GOLGA6BA6NDN3 693 aa14.21□□□□□ -0.13
SLC28A1-203ENST00000394573 SEC24CP53992 1094 aa14.21□□□□□ -0.13
SLC28A1-203ENST00000394573 BZW1Q7L1Q6 419 aaKnown RBP14.21□□□□□ -0.13
SLC28A1-203ENST00000394573 ANKRD23Q86SG2 305 aa14.21□□□□□ -0.13
SLC28A1-203ENST00000394573 FUKQ8N0W3 1084 aa14.21□□□□□ -0.13
SLC28A1-203ENST00000394573 ENGASEQ8NFI3 743 aa14.21□□□□□ -0.13
SLC28A1-203ENST00000394573 CHCHD3Q9NX63 227 aaKnown RBP14.21□□□□□ -0.13
SLC28A1-203ENST00000394573 GOLGA6L9A6NEM1 432 aa14.21□□□□□ -0.14
SLC28A1-203ENST00000394573 RCSD1Q6JBY9 416 aa14.21□□□□□ -0.14
SLC28A1-203ENST00000394573 VSTM4Q8IW00 320 aa14.21□□□□□ -0.14
SLC28A1-203ENST00000394573 KIF5CO60282 957 aa14.2□□□□□ -0.14
SLC28A1-203ENST00000394573 PPFIA2O75334 1257 aa14.2□□□□□ -0.14
SLC28A1-203ENST00000394573 NDUFA8P51970 172 aa14.2□□□□□ -0.14
SLC28A1-203ENST00000394573 FCHSD1Q86WN1 690 aa14.2□□□□□ -0.14
SLC28A1-203ENST00000394573 ZSWIM6Q9HCJ5 1215 aa14.2□□□□□ -0.14
SLC28A1-203ENST00000394573 KIAA1468Q9P260 1216 aa14.2□□□□□ -0.14
SLC28A1-203ENST00000394573 CFAP45Q9UL16 551 aa14.2□□□□□ -0.14
SLC28A1-203ENST00000394573 TAF6LQ9Y6J9 622 aa14.2□□□□□ -0.14
SLC28A1-203ENST00000394573 SCNN1BP51168 640 aa14.2□□□□□ -0.14
SLC28A1-203ENST00000394573 MRPS25P82663 173 aaKnown RBP14.2□□□□□ -0.14
SLC28A1-203ENST00000394573 LONRF3Q496Y0 759 aa14.2□□□□□ -0.14
SLC28A1-203ENST00000394573 NAA35Q5VZE5 725 aa14.2□□□□□ -0.14
SLC28A1-203ENST00000394573 MYLK4Q86YV6 388 aaPredicted RBP14.2□□□□□ -0.14
SLC28A1-203ENST00000394573 BAIAP2L1Q9UHR4 511 aa14.2□□□□□ -0.14
SLC28A1-203ENST00000394573 BUB1BO60566 1050 aaPredicted RBP14.19□□□□□ -0.14
SLC28A1-203ENST00000394573 ABCD1P33897 745 aa14.19□□□□□ -0.14
SLC28A1-203ENST00000394573 SLC8A3P57103 927 aa14.19□□□□□ -0.14
SLC28A1-203ENST00000394573 HDLBPQ00341 1268 aaKnown RBP14.19□□□□□ -0.14
SLC28A1-203ENST00000394573 GUCY1A3Q02108 690 aa14.19□□□□□ -0.14
SLC28A1-203ENST00000394573 RASSF8Q8NHQ8 419 aa14.19□□□□□ -0.14
SLC28A1-203ENST00000394573 CPLX3Q8WVH0 158 aa14.19□□□□□ -0.14
SLC28A1-203ENST00000394573 TBC1D5Q92609 795 aa14.19□□□□□ -0.14
SLC28A1-203ENST00000394573 ARL8AQ96BM9 186 aa14.19□□□□□ -0.14
SLC28A1-203ENST00000394573 INTS13Q9NVM9 706 aa14.19□□□□□ -0.14
SLC28A1-203ENST00000394573 CTAGE9A4FU28 777 aa14.19□□□□□ -0.14
SLC28A1-203ENST00000394573 RTN3O95197 1032 aaPredicted RBP14.19□□□□□ -0.14
SLC28A1-203ENST00000394573 PRPHP41219 470 aa14.19□□□□□ -0.14
SLC28A1-203ENST00000394573 MIS18BP1Q6P0N0 1132 aa14.19□□□□□ -0.14
SLC28A1-203ENST00000394573 TC2NQ8N9U0 490 aa14.19□□□□□ -0.14
SLC28A1-203ENST00000394573 SMARCC2Q8TAQ2 1214 aa14.19□□□□□ -0.14
SLC28A1-203ENST00000394573 EPAS1Q99814 870 aa14.19□□□□□ -0.14
SLC28A1-203ENST00000394573 SELENOOQ9BVL4 669 aa14.19□□□□□ -0.14
SLC28A1-203ENST00000394573 VIPAS39Q9H9C1 493 aa14.19□□□□□ -0.14
SLC28A1-203ENST00000394573 Q6ZUG5 572 aa14.18□□□□□ -0.14
SLC28A1-203ENST00000394573 MAB21L3Q8N8X9 362 aa14.18□□□□□ -0.14
SLC28A1-203ENST00000394573 CCDC148Q8NFR7 591 aa14.18□□□□□ -0.14
SLC28A1-203ENST00000394573 RRP36Q96EU6 259 aaKnown RBP14.18□□□□□ -0.14
SLC28A1-203ENST00000394573 CCDC97Q96F63 343 aaPredicted RBP14.18□□□□□ -0.14
SLC28A1-203ENST00000394573 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.18□□□□□ -0.14
SLC28A1-203ENST00000394573 TAOK2Q9UL54 1235 aa14.18□□□□□ -0.14
SLC28A1-203ENST00000394573 TRPC6Q9Y210 931 aa14.18□□□□□ -0.14
SLC28A1-203ENST00000394573 L3MBTL1Q9Y468 752 aa14.18□□□□□ -0.14
SLC28A1-203ENST00000394573 CCDC175P0C221 793 aa14.18□□□□□ -0.14
SLC28A1-203ENST00000394573 SLC30A9Q6PML9 568 aa14.18□□□□□ -0.14
SLC28A1-203ENST00000394573 CAPZA3Q96KX2 299 aa14.18□□□□□ -0.14
SLC28A1-203ENST00000394573 FAM167BQ9BTA0 163 aa14.18□□□□□ -0.14
SLC28A1-203ENST00000394573 SUDS3Q9H7L9 328 aaPredicted RBP14.18□□□□□ -0.14
SLC28A1-203ENST00000394573 KIAA0232Q92628 1395 aa14.18□□□□□ -0.14
SLC28A1-203ENST00000394573 SPDYE3A6NKU9 549 aa14.17□□□□□ -0.14
SLC28A1-203ENST00000394573 APBA1Q02410 837 aa14.17□□□□□ -0.14
SLC28A1-203ENST00000394573 NUP58Q9BVL2 599 aa14.17□□□□□ -0.14
SLC28A1-203ENST00000394573 ADD1P35611 737 aaKnown RBP14.17□□□□□ -0.14
SLC28A1-203ENST00000394573 CCDC96Q2M329 555 aa14.17□□□□□ -0.14
SLC28A1-203ENST00000394573 TSPYL2Q9H2G4 693 aaPredicted RBP14.17□□□□□ -0.14
SLC28A1-203ENST00000394573 SENP3Q9H4L4 574 aaPredicted RBP14.17□□□□□ -0.14
SLC28A1-203ENST00000394573 DNM1LO00429 736 aa14.17□□□□□ -0.14
SLC28A1-203ENST00000394573 ENC1O14682 589 aa14.17□□□□□ -0.14
SLC28A1-203ENST00000394573 STX10O60499 249 aa14.17□□□□□ -0.14
SLC28A1-203ENST00000394573 SLC3A2P08195 630 aaKnown RBP14.17□□□□□ -0.14
SLC28A1-203ENST00000394573 SF3A3Q12874 501 aaKnown RBP eCLIP14.17□□□□□ -0.143e-8■■■■■ 54.4
SLC28A1-203ENST00000394573 MFSD4BQ5TF39 518 aa14.17□□□□□ -0.14
SLC28A1-203ENST00000394573 RAD9BQ6WBX8 426 aa14.17□□□□□ -0.14
SLC28A1-203ENST00000394573 SPATA21Q7Z572 469 aa14.17□□□□□ -0.14
SLC28A1-203ENST00000394573 FMR1NBQ8N0W7 255 aaPredicted RBP14.17□□□□□ -0.14
SLC28A1-203ENST00000394573 ZNF473Q8WTR7 871 aaKnown RBP14.17□□□□□ -0.14
SLC28A1-203ENST00000394573 SPAG5Q96R06 1193 aa14.17□□□□□ -0.14
SLC28A1-203ENST00000394573 HDAC6Q9UBN7 1215 aa14.17□□□□□ -0.14
SLC28A1-203ENST00000394573 PCDHGC5Q9Y5F6 944 aa14.17□□□□□ -0.14
SLC28A1-203ENST00000394573 TTC37Q6PGP7 1564 aa14.16□□□□□ -0.14
SLC28A1-203ENST00000394573 CDC42BPAQ5VT25 1732 aa14.16□□□□□ -0.14
SLC28A1-203ENST00000394573 ADGRF5Q8IZF2 1346 aa14.16□□□□□ -0.14
SLC28A1-203ENST00000394573 BACH1O14867 736 aa14.16□□□□□ -0.14
SLC28A1-203ENST00000394573 SRGAP2O75044 1071 aa14.16□□□□□ -0.14
SLC28A1-203ENST00000394573 SLC4A2P04920 1241 aa14.16□□□□□ -0.14
SLC28A1-203ENST00000394573 GNAT1P11488 350 aa14.16□□□□□ -0.14
SLC28A1-203ENST00000394573 SPECC1Q5M775 1068 aa14.16□□□□□ -0.14
SLC28A1-203ENST00000394573 MICALCLQ6ZW33 695 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms