RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 TRMT1Q9NXH9 659 aaKnown RBP15.7■□□□□ 0.1
GTF2F1-201ENST00000394456 RTEL1Q9NZ71 1219 aa15.7■□□□□ 0.1
GTF2F1-201ENST00000394456 TPM3P06753 285 aa15.7■□□□□ 0.1
GTF2F1-201ENST00000394456 SF3A1Q15459 793 aaKnown RBP15.7■□□□□ 0.1
GTF2F1-201ENST00000394456 MYSM1Q5VVJ2 828 aa15.7■□□□□ 0.1
GTF2F1-201ENST00000394456 RALYLQ86SE5 291 aaKnown RBP15.7■□□□□ 0.1
GTF2F1-201ENST00000394456 ZNF592Q92610 1267 aa15.7■□□□□ 0.1
GTF2F1-201ENST00000394456 CPLX1O14810 134 aa15.69■□□□□ 0.1
GTF2F1-201ENST00000394456 VPS72Q15906 364 aa15.69■□□□□ 0.1
GTF2F1-201ENST00000394456 LRRC8AQ8IWT6 810 aa15.69■□□□□ 0.1
GTF2F1-201ENST00000394456 NCOA7Q8NI08 942 aa15.69■□□□□ 0.1
GTF2F1-201ENST00000394456 TAF1P21675 1872 aa15.69■□□□□ 0.1
GTF2F1-201ENST00000394456 ZNF532Q9HCE3 1301 aa15.69■□□□□ 0.1
GTF2F1-201ENST00000394456 NTSR2O95665 410 aa15.69■□□□□ 0.1
GTF2F1-201ENST00000394456 TNNT1P13805 278 aa15.69■□□□□ 0.1
GTF2F1-201ENST00000394456 CCDC102BQ68D86 513 aa15.69■□□□□ 0.1
GTF2F1-201ENST00000394456 MICU3Q86XE3 530 aa15.69■□□□□ 0.1
GTF2F1-201ENST00000394456 MPHOSPH8Q99549 860 aa15.69■□□□□ 0.1
GTF2F1-201ENST00000394456 CTNNA3Q9UI47 895 aa15.69■□□□□ 0.1
GTF2F1-201ENST00000394456 MYH15Q9Y2K3 1946 aa15.69■□□□□ 0.1
GTF2F1-201ENST00000394456 ADD2P35612 726 aa15.68■□□□□ 0.1
GTF2F1-201ENST00000394456 KIF23Q02241 960 aaPredicted RBP15.68■□□□□ 0.1
GTF2F1-201ENST00000394456 BICDL1Q6ZP65 573 aa15.68■□□□□ 0.1
GTF2F1-201ENST00000394456 SPDYE4A6NLX3 237 aa15.68■□□□□ 0.1
GTF2F1-201ENST00000394456 SPTLC2O15270 562 aa15.68■□□□□ 0.1
GTF2F1-201ENST00000394456 TPD52L1Q16890 204 aaPredicted RBP15.68■□□□□ 0.1
GTF2F1-201ENST00000394456 PARP10Q53GL7 1025 aa15.68■□□□□ 0.1
GTF2F1-201ENST00000394456 ADALQ6DHV7 355 aa15.68■□□□□ 0.1
GTF2F1-201ENST00000394456 NBPF11Q86T75 865 aa15.68■□□□□ 0.1
GTF2F1-201ENST00000394456 COL4A1P02462 1669 aa15.67■□□□□ 0.1
GTF2F1-201ENST00000394456 SMIM22K7EJ46 135 aa15.67■□□□□ 0.1
GTF2F1-201ENST00000394456 CTDSPL2Q05D32 466 aa15.67■□□□□ 0.1
GTF2F1-201ENST00000394456 PUM3Q15397 648 aaKnown RBP15.67■□□□□ 0.1
GTF2F1-201ENST00000394456 PPP4R3BQ5MIZ7 849 aa15.67■□□□□ 0.1
GTF2F1-201ENST00000394456 KLHL34Q8N239 644 aa15.67■□□□□ 0.1
GTF2F1-201ENST00000394456 CLIC6Q96NY7 704 aa15.67■□□□□ 0.1
GTF2F1-201ENST00000394456 EP400Q96L91 3159 aa15.67■□□□□ 0.1
GTF2F1-201ENST00000394456 LRP5O75197 1615 aa15.67■□□□□ 0.1
GTF2F1-201ENST00000394456 CCDC69A6NI79 296 aa15.67■□□□□ 0.1
GTF2F1-201ENST00000394456 CBX1P83916 185 aa15.67■□□□□ 0.1
GTF2F1-201ENST00000394456 LRRFIP1Q32MZ4 808 aaKnown RBP15.67■□□□□ 0.1
GTF2F1-201ENST00000394456 AXDND1Q5T1B0 1012 aaPredicted RBP15.67■□□□□ 0.1
GTF2F1-201ENST00000394456 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.67■□□□□ 0.1
GTF2F1-201ENST00000394456 MAP7D2Q96T17 732 aa15.67■□□□□ 0.1
GTF2F1-201ENST00000394456 ANO10Q9NW15 660 aa15.67■□□□□ 0.1
GTF2F1-201ENST00000394456 CICQ96RK0 1608 aaPredicted RBP15.67■□□□□ 0.1
GTF2F1-201ENST00000394456 MROH5Q6ZUA9 1318 aa15.67■□□□□ 0.1
GTF2F1-201ENST00000394456 ZFYP08048 801 aaPredicted RBP15.67■□□□□ 0.1
GTF2F1-201ENST00000394456 PFKFB1P16118 471 aa15.67■□□□□ 0.1
GTF2F1-201ENST00000394456 SARM1Q6SZW1 724 aa15.67■□□□□ 0.1
GTF2F1-201ENST00000394456 USP21Q9UK80 565 aa15.67■□□□□ 0.1
GTF2F1-201ENST00000394456 BCORQ6W2J9 1755 aa15.66■□□□□ 0.1
GTF2F1-201ENST00000394456 CTAGE5O15320 804 aa15.66■□□□□ 0.1
GTF2F1-201ENST00000394456 PRKAB2O43741 272 aa15.66■□□□□ 0.1
GTF2F1-201ENST00000394456 RANBP6O60518 1105 aaKnown RBP15.66■□□□□ 0.1
GTF2F1-201ENST00000394456 PDE6AP16499 860 aa15.66■□□□□ 0.1
GTF2F1-201ENST00000394456 CCZ1BP86790 482 aa15.66■□□□□ 0.1
GTF2F1-201ENST00000394456 CCZ1P86791 482 aaPredicted RBP15.66■□□□□ 0.1
GTF2F1-201ENST00000394456 CCDC152Q4G0S7 254 aa15.66■□□□□ 0.1
GTF2F1-201ENST00000394456 CMTR1Q8N1G2 835 aaKnown RBP15.66■□□□□ 0.1
GTF2F1-201ENST00000394456 LPIN2Q92539 896 aa15.66■□□□□ 0.1
GTF2F1-201ENST00000394456 AK7Q96M32 723 aa15.66■□□□□ 0.1
GTF2F1-201ENST00000394456 ZKSCAN3Q9BRR0 538 aa15.66■□□□□ 0.1
GTF2F1-201ENST00000394456 EPB41L4AQ9HCS5 686 aaPredicted RBP15.66■□□□□ 0.1
GTF2F1-201ENST00000394456 KIAA1468Q9P260 1216 aa15.66■□□□□ 0.1
GTF2F1-201ENST00000394456 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.66■□□□□ 0.1
GTF2F1-201ENST00000394456 V9GYY5 206 aaPredicted RBP15.66■□□□□ 0.1
GTF2F1-201ENST00000394456 ABCC12Q96J65 1359 aa15.66■□□□□ 0.1
GTF2F1-201ENST00000394456 WTIPA6NIX2 430 aaPredicted RBP15.66■□□□□ 0.1
GTF2F1-201ENST00000394456 ZNF202O95125 648 aa15.66■□□□□ 0.1
GTF2F1-201ENST00000394456 SKILP12757 684 aa15.66■□□□□ 0.1
GTF2F1-201ENST00000394456 FGFR2P21802 821 aa15.66■□□□□ 0.1
GTF2F1-201ENST00000394456 SPECC1Q5M775 1068 aa15.66■□□□□ 0.1
GTF2F1-201ENST00000394456 ANO1Q5XXA6 986 aa15.66■□□□□ 0.1
GTF2F1-201ENST00000394456 CCDC82Q8N4S0 544 aa15.66■□□□□ 0.1
GTF2F1-201ENST00000394456 ALG1Q9BT22 464 aa15.66■□□□□ 0.1
GTF2F1-201ENST00000394456 U2AF2P26368 475 aaKnown RBP eCLIP15.65■□□□□ 0.13e-6■■■□□ 19.1
GTF2F1-201ENST00000394456 CHAF1AQ13111 956 aaPredicted RBP15.65■□□□□ 0.1
GTF2F1-201ENST00000394456 C3orf67Q6ZVT6 689 aa15.65■□□□□ 0.1
GTF2F1-201ENST00000394456 TICAM2Q86XR7 235 aa15.65■□□□□ 0.1
GTF2F1-201ENST00000394456 CEP57L1Q8IYX8 460 aa15.65■□□□□ 0.1
GTF2F1-201ENST00000394456 FBXL16Q8N461 479 aa15.65■□□□□ 0.1
GTF2F1-201ENST00000394456 MRFAP1L1Q96HT8 127 aa15.65■□□□□ 0.1
GTF2F1-201ENST00000394456 ZNF652Q9Y2D9 606 aa15.65■□□□□ 0.1
GTF2F1-201ENST00000394456 BTAF1O14981 1849 aa15.65■□□□□ 0.1
GTF2F1-201ENST00000394456 SH2B2O14492 632 aaPredicted RBP15.65■□□□□ 0.1
GTF2F1-201ENST00000394456 GUCY1A2P33402 732 aa15.65■□□□□ 0.1
GTF2F1-201ENST00000394456 NCBP1Q09161 790 aaKnown RBP15.65■□□□□ 0.1
GTF2F1-201ENST00000394456 ERFEQ4G0M1 354 aa15.65■□□□□ 0.1
GTF2F1-201ENST00000394456 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.65■□□□□ 0.1
GTF2F1-201ENST00000394456 FAM217BQ9NTX9 383 aaPredicted RBP15.65■□□□□ 0.1
GTF2F1-201ENST00000394456 CASZ1Q86V15 1759 aa15.65■□□□□ 0.1
GTF2F1-201ENST00000394456 ARAP2Q8WZ64 1704 aa15.64■□□□□ 0.09
GTF2F1-201ENST00000394456 LAMB2P55268 1798 aa15.64■□□□□ 0.09
GTF2F1-201ENST00000394456 TCRBV5S4A2TA0A5A2 114 aa15.64■□□□□ 0.09
GTF2F1-201ENST00000394456 ATP1A3P13637 1013 aa15.64■□□□□ 0.09
GTF2F1-201ENST00000394456 CDC25BP30305 580 aa15.64■□□□□ 0.09
GTF2F1-201ENST00000394456 METAP2P50579 478 aaKnown RBP eCLIP15.64■□□□□ 0.093e-8■■■■■ 26.8
GTF2F1-201ENST00000394456 KRT40Q6A162 431 aa15.64■□□□□ 0.09
GTF2F1-201ENST00000394456 APOA5Q6Q788 366 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms