RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 FANCCQ00597 558 aa12.16□□□□□ -0.46
ACTN1-203ENST00000394419 ZNF827Q17R98 1081 aa12.16□□□□□ -0.46
ACTN1-203ENST00000394419 BRINP3Q76B58 766 aa12.16□□□□□ -0.46
ACTN1-203ENST00000394419 PALLDQ8WX93 1383 aa12.15□□□□□ -0.46
ACTN1-203ENST00000394419 BTBD18B2RXH4 712 aa12.15□□□□□ -0.46
ACTN1-203ENST00000394419 PRDM1O75626 825 aa12.15□□□□□ -0.46
ACTN1-203ENST00000394419 ADAMTS2O95450 1211 aa12.15□□□□□ -0.46
ACTN1-203ENST00000394419 YEATS4O95619 227 aa12.15□□□□□ -0.46
ACTN1-203ENST00000394419 TEX13AQ9BXU3 409 aaPredicted RBP12.15□□□□□ -0.46
ACTN1-203ENST00000394419 HOOK1Q9UJC3 728 aaKnown RBP12.15□□□□□ -0.46
ACTN1-203ENST00000394419 CDC27P30260 824 aa12.15□□□□□ -0.46
ACTN1-203ENST00000394419 AFMP43652 599 aa12.15□□□□□ -0.46
ACTN1-203ENST00000394419 WTAPQ15007 396 aa12.15□□□□□ -0.46
ACTN1-203ENST00000394419 ELF2Q15723 593 aa12.15□□□□□ -0.46
ACTN1-203ENST00000394419 APOA5Q6Q788 366 aa12.15□□□□□ -0.46
ACTN1-203ENST00000394419 NLRP10Q86W26 655 aa12.15□□□□□ -0.46
ACTN1-203ENST00000394419 MB21D2Q8IYB1 491 aaPredicted RBP12.15□□□□□ -0.46
ACTN1-203ENST00000394419 UTP14AQ9BVJ6 771 aaKnown RBP12.15□□□□□ -0.46
ACTN1-203ENST00000394419 SEC31BQ9NQW1 1179 aa12.15□□□□□ -0.46
ACTN1-203ENST00000394419 SLAIN2Q9P270 581 aa12.15□□□□□ -0.46
ACTN1-203ENST00000394419 EXOC5O00471 708 aa12.14□□□□□ -0.47
ACTN1-203ENST00000394419 WDHD1O75717 1129 aaPredicted RBP12.14□□□□□ -0.47
ACTN1-203ENST00000394419 PDE8BO95263 885 aa12.14□□□□□ -0.47
ACTN1-203ENST00000394419 IGHMBP2P38935 993 aaKnown RBP12.14□□□□□ -0.47
ACTN1-203ENST00000394419 BCAMP50895 628 aa12.14□□□□□ -0.47
ACTN1-203ENST00000394419 GIGYF2Q6Y7W6 1299 aaKnown RBP12.14□□□□□ -0.47
ACTN1-203ENST00000394419 TRMT44Q8IYL2 757 aaKnown RBP12.14□□□□□ -0.47
ACTN1-203ENST00000394419 ENGASEQ8NFI3 743 aa12.14□□□□□ -0.47
ACTN1-203ENST00000394419 ISCA1Q9BUE6 129 aa12.14□□□□□ -0.47
ACTN1-203ENST00000394419 JAG2Q9Y219 1238 aa12.14□□□□□ -0.47
ACTN1-203ENST00000394419 ADD2P35612 726 aa12.14□□□□□ -0.47
ACTN1-203ENST00000394419 POLR2DO15514 142 aaKnown RBP12.14□□□□□ -0.47
ACTN1-203ENST00000394419 STX17P56962 302 aa12.14□□□□□ -0.47
ACTN1-203ENST00000394419 NLRP12P59046 1061 aa12.14□□□□□ -0.47
ACTN1-203ENST00000394419 NCBP1Q09161 790 aaKnown RBP12.14□□□□□ -0.47
ACTN1-203ENST00000394419 RTN1Q16799 776 aa12.14□□□□□ -0.47
ACTN1-203ENST00000394419 RBM43Q6ZSC3 357 aaKnown RBP12.14□□□□□ -0.47
ACTN1-203ENST00000394419 DIS3L2Q8IYB7 885 aaKnown RBP12.14□□□□□ -0.47
ACTN1-203ENST00000394419 ZSWIM5Q9P217 1185 aa12.14□□□□□ -0.47
ACTN1-203ENST00000394419 KCNH3Q9ULD8 1083 aa12.14□□□□□ -0.47
ACTN1-203ENST00000394419 HPS5Q9UPZ3 1129 aa12.14□□□□□ -0.47
ACTN1-203ENST00000394419 CYP7A1P22680 504 aa12.13□□□□□ -0.47
ACTN1-203ENST00000394419 SPATA5Q8NB90 893 aa12.13□□□□□ -0.47
ACTN1-203ENST00000394419 MAP3K15Q6ZN16 1313 aa12.13□□□□□ -0.47
ACTN1-203ENST00000394419 UQCRFS1P1P0C7P4 283 aa12.13□□□□□ -0.47
ACTN1-203ENST00000394419 GRAMD1CQ8IYS0 662 aa12.13□□□□□ -0.47
ACTN1-203ENST00000394419 SDR42E1Q8WUS8 393 aa12.13□□□□□ -0.47
ACTN1-203ENST00000394419 CABP5Q9NP86 173 aa12.13□□□□□ -0.47
ACTN1-203ENST00000394419 POLR3EQ9NVU0 708 aa12.13□□□□□ -0.47
ACTN1-203ENST00000394419 OVOS2A0A0G2JMS6 1433 aa12.13□□□□□ -0.47
ACTN1-203ENST00000394419 CMA1P23946 247 aa12.13□□□□□ -0.47
ACTN1-203ENST00000394419 IFNL3Q8IZI9 196 aa12.13□□□□□ -0.47
ACTN1-203ENST00000394419 ZSWIM4Q9H7M6 989 aa12.13□□□□□ -0.47
ACTN1-203ENST00000394419 ATG3Q9NT62 314 aa12.13□□□□□ -0.47
ACTN1-203ENST00000394419 FANCLQ9NW38 375 aa12.13□□□□□ -0.47
ACTN1-203ENST00000394419 A0A1W2PQ27 194 aa12.12□□□□□ -0.47
ACTN1-203ENST00000394419 A0A1W2PQ64 194 aa12.12□□□□□ -0.47
ACTN1-203ENST00000394419 A0A1W2PQD8 194 aa12.12□□□□□ -0.47
ACTN1-203ENST00000394419 PDE8AO60658 829 aa12.12□□□□□ -0.47
ACTN1-203ENST00000394419 SLC39A14Q15043 492 aa12.12□□□□□ -0.47
ACTN1-203ENST00000394419 PUM3Q15397 648 aaKnown RBP12.12□□□□□ -0.47
ACTN1-203ENST00000394419 STAMQ92783 540 aa12.12□□□□□ -0.47
ACTN1-203ENST00000394419 CARD10Q9BWT7 1032 aa12.12□□□□□ -0.47
ACTN1-203ENST00000394419 PCDHA5Q9Y5H7 936 aa12.12□□□□□ -0.47
ACTN1-203ENST00000394419 NEDD4P46934 1319 aa12.12□□□□□ -0.47
ACTN1-203ENST00000394419 NUTM2BA6NNL0 878 aaPredicted RBP12.12□□□□□ -0.47
ACTN1-203ENST00000394419 NUTM2EB1AL46 878 aaPredicted RBP12.12□□□□□ -0.47
ACTN1-203ENST00000394419 FOXN1O15353 648 aa12.12□□□□□ -0.47
ACTN1-203ENST00000394419 MYL5Q02045 173 aa12.12□□□□□ -0.47
ACTN1-203ENST00000394419 NR5A1Q13285 461 aa12.12□□□□□ -0.47
ACTN1-203ENST00000394419 LONRF3Q496Y0 759 aa12.12□□□□□ -0.47
ACTN1-203ENST00000394419 NUTM2AQ8IVF1 878 aaPredicted RBP12.12□□□□□ -0.47
ACTN1-203ENST00000394419 CCDC150Q8NCX0 1101 aa12.12□□□□□ -0.47
ACTN1-203ENST00000394419 DHX58Q96C10 678 aa12.12□□□□□ -0.47
ACTN1-203ENST00000394419 CGNQ9P2M7 1197 aaKnown RBP12.12□□□□□ -0.47
ACTN1-203ENST00000394419 NIP7Q9Y221 180 aaKnown RBP eCLIP12.12□□□□□ -0.47
ACTN1-203ENST00000394419 ZMYM6O95789 1325 aa12.12□□□□□ -0.47
ACTN1-203ENST00000394419 CBFA2T2O43439 604 aa12.12□□□□□ -0.47
ACTN1-203ENST00000394419 CCDC24Q8N4L8 307 aa12.12□□□□□ -0.47
ACTN1-203ENST00000394419 CCDC34Q96HJ3 373 aa12.12□□□□□ -0.47
ACTN1-203ENST00000394419 RIPOR2Q9Y4F9 1068 aa12.12□□□□□ -0.47
ACTN1-203ENST00000394419 RFX7Q2KHR2 1363 aa12.11□□□□□ -0.47
ACTN1-203ENST00000394419 SLU7O95391 586 aaKnown RBP12.11□□□□□ -0.47
ACTN1-203ENST00000394419 ATP6V1AP38606 617 aa12.11□□□□□ -0.47
ACTN1-203ENST00000394419 KRI1Q8N9T8 703 aaKnown RBP12.11□□□□□ -0.47
ACTN1-203ENST00000394419 LPIN2Q92539 896 aa12.11□□□□□ -0.47
ACTN1-203ENST00000394419 SH2B2O14492 632 aaPredicted RBP12.11□□□□□ -0.47
ACTN1-203ENST00000394419 COBLO75128 1261 aa12.11□□□□□ -0.47
ACTN1-203ENST00000394419 ERCC6LQ2NKX8 1250 aa12.11□□□□□ -0.47
ACTN1-203ENST00000394419 SARM1Q6SZW1 724 aa12.11□□□□□ -0.47
ACTN1-203ENST00000394419 WASF1Q92558 559 aa12.11□□□□□ -0.47
ACTN1-203ENST00000394419 UBXN4Q92575 508 aa12.11□□□□□ -0.47
ACTN1-203ENST00000394419 SMARCE1Q969G3 411 aa12.11□□□□□ -0.47
ACTN1-203ENST00000394419 KDM3BQ7LBC6 1761 aa12.11□□□□□ -0.47
ACTN1-203ENST00000394419 XBP1P17861 261 aa12.1□□□□□ -0.47
ACTN1-203ENST00000394419 GUCY1A2P33402 732 aa12.1□□□□□ -0.47
ACTN1-203ENST00000394419 GTF2F1P35269 517 aaKnown RBP eCLIP12.1□□□□□ -0.47
ACTN1-203ENST00000394419 RASGRF1Q13972 1273 aa12.1□□□□□ -0.47
ACTN1-203ENST00000394419 NKX2-3Q8TAU0 364 aa12.1□□□□□ -0.47
ACTN1-203ENST00000394419 TMEM87BQ96K49 555 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms