RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 HIBADHP31937 336 aaKnown RBP13.02□□□□□ -0.33
TCOF1-203ENST00000394269 NFIXQ14938 502 aa13.02□□□□□ -0.33
TCOF1-203ENST00000394269 SYNE3Q6ZMZ3 975 aa13.02□□□□□ -0.33
TCOF1-203ENST00000394269 FAM43AQ8N2R8 423 aa13.02□□□□□ -0.33
TCOF1-203ENST00000394269 CNBD1Q8NA66 436 aa13.02□□□□□ -0.33
TCOF1-203ENST00000394269 ERCC4Q92889 916 aaPredicted RBP13.02□□□□□ -0.33
TCOF1-203ENST00000394269 NUP62CLQ9H1M0 184 aa13.02□□□□□ -0.33
TCOF1-203ENST00000394269 CFAP45Q9UL16 551 aa13.02□□□□□ -0.33
TCOF1-203ENST00000394269 MTMR7Q9Y216 660 aa13.02□□□□□ -0.33
TCOF1-203ENST00000394269 ESPNB1AK53 854 aa13.01□□□□□ -0.33
TCOF1-203ENST00000394269 NR1I2O75469 434 aa13.01□□□□□ -0.33
TCOF1-203ENST00000394269 HPS5Q9UPZ3 1129 aa13.01□□□□□ -0.33
TCOF1-203ENST00000394269 GOLGA8AA7E2F4 631 aa13.01□□□□□ -0.33
TCOF1-203ENST00000394269 ZBTB43O43298 467 aa13.01□□□□□ -0.33
TCOF1-203ENST00000394269 ATP2B1P20020 1258 aa13.01□□□□□ -0.33
TCOF1-203ENST00000394269 PRDX5P30044 214 aa13.01□□□□□ -0.33
TCOF1-203ENST00000394269 UBE4AQ14139 1066 aa13.01□□□□□ -0.33
TCOF1-203ENST00000394269 PIBF1Q8WXW3 757 aa13.01□□□□□ -0.33
TCOF1-203ENST00000394269 PGBD1Q96JS3 809 aa13.01□□□□□ -0.33
TCOF1-203ENST00000394269 ZSCAN16Q9H4T2 348 aaPredicted RBP13.01□□□□□ -0.33
TCOF1-203ENST00000394269 CNTNAP4Q9C0A0 1308 aa13.01□□□□□ -0.33
TCOF1-203ENST00000394269 ERICH2A1L162 156 aa13.01□□□□□ -0.33
TCOF1-203ENST00000394269 AKNAD1Q5T1N1 836 aa13.01□□□□□ -0.33
TCOF1-203ENST00000394269 CARMIL3Q8ND23 1372 aa13□□□□□ -0.33
TCOF1-203ENST00000394269 A0A087WWV3 80 aa13□□□□□ -0.33
TCOF1-203ENST00000394269 CDC27P30260 824 aa13□□□□□ -0.33
TCOF1-203ENST00000394269 SLC26A6Q9BXS9 759 aa13□□□□□ -0.33
TCOF1-203ENST00000394269 AGXT2Q9BYV1 514 aa13□□□□□ -0.33
TCOF1-203ENST00000394269 TRPC5Q9UL62 973 aaPredicted RBP13□□□□□ -0.33
TCOF1-203ENST00000394269 hCG_1642624A0A1W2PR95 340 aa13□□□□□ -0.33
TCOF1-203ENST00000394269 CPLX2Q6PUV4 134 aaKnown RBP13□□□□□ -0.33
TCOF1-203ENST00000394269 UBAC1Q9BSL1 405 aa13□□□□□ -0.33
TCOF1-203ENST00000394269 ALG1Q9BT22 464 aa13□□□□□ -0.33
TCOF1-203ENST00000394269 EVX2Q03828 476 aa13□□□□□ -0.33
TCOF1-203ENST00000394269 APOA5Q6Q788 366 aa13□□□□□ -0.33
TCOF1-203ENST00000394269 TACC3Q9Y6A5 838 aa13□□□□□ -0.33
TCOF1-203ENST00000394269 RPGRQ92834 1020 aaKnown RBP12.99□□□□□ -0.33
TCOF1-203ENST00000394269 ZNF804BA4D1E1 1349 aa12.99□□□□□ -0.33
TCOF1-203ENST00000394269 PDIA4P13667 645 aaKnown RBP12.99□□□□□ -0.33
TCOF1-203ENST00000394269 SART3Q15020 963 aaKnown RBP12.99□□□□□ -0.33
TCOF1-203ENST00000394269 STK38Q15208 465 aa12.99□□□□□ -0.33
TCOF1-203ENST00000394269 MAP3K11Q16584 847 aa12.99□□□□□ -0.33
TCOF1-203ENST00000394269 RC3H1Q5TC82 1133 aaKnown RBP12.99□□□□□ -0.33
TCOF1-203ENST00000394269 CCAR1Q8IX12 1150 aaKnown RBP12.99□□□□□ -0.33
TCOF1-203ENST00000394269 SPATA31A6Q5VVP1 1343 aa12.99□□□□□ -0.33
TCOF1-203ENST00000394269 SH2B2O14492 632 aaPredicted RBP12.98□□□□□ -0.33
TCOF1-203ENST00000394269 IARSP41252 1262 aaKnown RBP12.98□□□□□ -0.33
TCOF1-203ENST00000394269 PPARAQ07869 468 aa12.98□□□□□ -0.33
TCOF1-203ENST00000394269 TICAM2Q86XR7 235 aa12.98□□□□□ -0.33
TCOF1-203ENST00000394269 COL22A1Q8NFW1 1626 aaPredicted RBP12.98□□□□□ -0.33
TCOF1-203ENST00000394269 USP17L12C9JPN9 530 aa12.98□□□□□ -0.33
TCOF1-203ENST00000394269 USP17L21D6R901 530 aa12.98□□□□□ -0.33
TCOF1-203ENST00000394269 MSNP26038 577 aaKnown RBP12.98□□□□□ -0.33
TCOF1-203ENST00000394269 MARCKSP29966 332 aaPredicted RBP12.98□□□□□ -0.33
TCOF1-203ENST00000394269 MECOMQ03112 1051 aa12.98□□□□□ -0.33
TCOF1-203ENST00000394269 WTAPQ15007 396 aa12.98□□□□□ -0.33
TCOF1-203ENST00000394269 DZIP1Q86YF9 867 aaKnown RBP12.98□□□□□ -0.33
TCOF1-203ENST00000394269 ZNF396Q96N95 335 aaPredicted RBP12.98□□□□□ -0.33
TCOF1-203ENST00000394269 CCDC192P0DO97 292 aa12.98□□□□□ -0.33
TCOF1-203ENST00000394269 IGDCC4Q8TDY8 1250 aa12.98□□□□□ -0.33
TCOF1-203ENST00000394269 ZNF830Q96NB3 372 aaPredicted RBP12.98□□□□□ -0.33
TCOF1-203ENST00000394269 LETM1O95202 739 aaPredicted RBP12.97□□□□□ -0.33
TCOF1-203ENST00000394269 TRIM29Q14134 588 aa12.97□□□□□ -0.33
TCOF1-203ENST00000394269 CLIC4Q9Y696 253 aa12.97□□□□□ -0.33
TCOF1-203ENST00000394269 A0A1B0GVL5 298 aa12.97□□□□□ -0.33
TCOF1-203ENST00000394269 SLC10A5Q5PT55 438 aa12.97□□□□□ -0.33
TCOF1-203ENST00000394269 CCDC73Q6ZRK6 1079 aa12.97□□□□□ -0.33
TCOF1-203ENST00000394269 FBXO18Q8NFZ0 1043 aa12.97□□□□□ -0.33
TCOF1-203ENST00000394269 KRT23Q9C075 422 aa12.97□□□□□ -0.33
TCOF1-203ENST00000394269 LY9Q9HBG7 655 aa12.97□□□□□ -0.33
TCOF1-203ENST00000394269 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.97□□□□□ -0.33
TCOF1-203ENST00000394269 GNAT2P19087 354 aa12.97□□□□□ -0.33
TCOF1-203ENST00000394269 FAM47AQ5JRC9 791 aa12.97□□□□□ -0.33
TCOF1-203ENST00000394269 DIXDC1Q155Q3 683 aa12.96□□□□□ -0.33
TCOF1-203ENST00000394269 SASS6Q6UVJ0 657 aa12.96□□□□□ -0.33
TCOF1-203ENST00000394269 FSIP1Q8NA03 581 aa12.96□□□□□ -0.33
TCOF1-203ENST00000394269 SPC24Q8NBT2 197 aa12.96□□□□□ -0.33
TCOF1-203ENST00000394269 SDF4Q9BRK5 362 aa12.96□□□□□ -0.33
TCOF1-203ENST00000394269 ANKRD2Q9GZV1 360 aa12.96□□□□□ -0.33
TCOF1-203ENST00000394269 C6orf229H3BNL8 230 aa12.96□□□□□ -0.33
TCOF1-203ENST00000394269 LUZP1Q86V48 1076 aa12.96□□□□□ -0.33
TCOF1-203ENST00000394269 TMEM87BQ96K49 555 aa12.96□□□□□ -0.33
TCOF1-203ENST00000394269 KCNJ14Q9UNX9 436 aa12.96□□□□□ -0.33
TCOF1-203ENST00000394269 TAF1P21675 1872 aa12.96□□□□□ -0.34
TCOF1-203ENST00000394269 KIF28PB7ZC32 967 aa12.95□□□□□ -0.34
TCOF1-203ENST00000394269 TULP1O00294 542 aaPredicted RBP12.95□□□□□ -0.34
TCOF1-203ENST00000394269 SERPINB2P05120 415 aa12.95□□□□□ -0.34
TCOF1-203ENST00000394269 CYP2D6P10635 497 aa12.95□□□□□ -0.34
TCOF1-203ENST00000394269 DEFB132Q7Z7B7 95 aa12.95□□□□□ -0.34
TCOF1-203ENST00000394269 CNNM2Q9H8M5 875 aa12.95□□□□□ -0.34
TCOF1-203ENST00000394269 ADCY5O95622 1261 aa12.95□□□□□ -0.34
TCOF1-203ENST00000394269 GUCY1A2P33402 732 aa12.95□□□□□ -0.34
TCOF1-203ENST00000394269 KRT40Q6A162 431 aa12.95□□□□□ -0.34
TCOF1-203ENST00000394269 KRT27Q7Z3Y8 459 aa12.95□□□□□ -0.34
TCOF1-203ENST00000394269 ZNF384Q8TF68 577 aa12.95□□□□□ -0.34
TCOF1-203ENST00000394269 PPP1R9BQ96SB3 815 aa12.95□□□□□ -0.34
TCOF1-203ENST00000394269 MCM9Q9NXL9 1143 aa12.95□□□□□ -0.34
TCOF1-203ENST00000394269 RIMBP2O15034 1052 aa12.95□□□□□ -0.34
TCOF1-203ENST00000394269 NMT2O60551 498 aa12.95□□□□□ -0.34
TCOF1-203ENST00000394269 KINO60870 393 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms