RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 BAG3O95817 575 aa14.93□□□□□ -0.02
USP49-203ENST00000394253 CCDC159P0C7I6 412 aa14.93□□□□□ -0.02
USP49-203ENST00000394253 KANK4Q5T7N3 995 aaPredicted RBP14.93□□□□□ -0.02
USP49-203ENST00000394253 CEP19Q96LK0 163 aa14.93□□□□□ -0.02
USP49-203ENST00000394253 FAM186BQ8IYM0 893 aa14.93□□□□□ -0.02
USP49-203ENST00000394253 ZNF710Q8N1W2 664 aa14.93□□□□□ -0.02
USP49-203ENST00000394253 CCDC138Q96M89 665 aa14.93□□□□□ -0.02
USP49-203ENST00000394253 NEK2P51955 445 aa14.93□□□□□ -0.02
USP49-203ENST00000394253 LIN9Q5TKA1 542 aa14.93□□□□□ -0.02
USP49-203ENST00000394253 GRAMD4Q6IC98 578 aa14.93□□□□□ -0.02
USP49-203ENST00000394253 EFHD1Q9BUP0 239 aa14.93□□□□□ -0.02
USP49-203ENST00000394253 C6orf50Q9HD87 102 aa14.93□□□□□ -0.02
USP49-203ENST00000394253 SPINK5Q9NQ38 1064 aaPredicted RBP14.93□□□□□ -0.02
USP49-203ENST00000394253 ANKRD30BQ9BXX2 1392 aa14.92□□□□□ -0.02
USP49-203ENST00000394253 KIF21BO75037 1637 aa14.92□□□□□ -0.02
USP49-203ENST00000394253 AFMP43652 599 aa14.92□□□□□ -0.02
USP49-203ENST00000394253 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.92□□□□□ -0.02
USP49-203ENST00000394253 TYRO3Q06418 890 aa14.92□□□□□ -0.02
USP49-203ENST00000394253 CFAP221Q4G0U5 840 aa14.92□□□□□ -0.02
USP49-203ENST00000394253 MICU3Q86XE3 530 aa14.92□□□□□ -0.02
USP49-203ENST00000394253 BAZ2BQ9UIF8 2168 aaKnown RBP14.92□□□□□ -0.02
USP49-203ENST00000394253 STARD3NLO95772 234 aa14.92□□□□□ -0.02
USP49-203ENST00000394253 NONOQ15233 471 aaKnown RBP eCLIP14.92□□□□□ -0.02
USP49-203ENST00000394253 TBC1D2Q9BYX2 928 aa14.92□□□□□ -0.02
USP49-203ENST00000394253 RBM27Q9P2N5 1060 aaKnown RBP14.92□□□□□ -0.02
USP49-203ENST00000394253 MRFAP1Q9Y605 127 aa14.92□□□□□ -0.02
USP49-203ENST00000394253 MYCNP04198 464 aaPredicted RBP14.92□□□□□ -0.02
USP49-203ENST00000394253 RSBN1LQ6PCB5 846 aaPredicted RBP14.92□□□□□ -0.02
USP49-203ENST00000394253 C16orf87Q6PH81 154 aa14.92□□□□□ -0.02
USP49-203ENST00000394253 NCOA7Q8NI08 942 aa14.92□□□□□ -0.02
USP49-203ENST00000394253 BAG2O95816 211 aa14.91□□□□□ -0.02
USP49-203ENST00000394253 IRX5P78411 483 aaPredicted RBP14.91□□□□□ -0.02
USP49-203ENST00000394253 DIABLOQ9NR28 239 aa14.91□□□□□ -0.02
USP49-203ENST00000394253 HLA-DOAP06340 250 aa14.91□□□□□ -0.02
USP49-203ENST00000394253 NLRP6P59044 892 aa14.91□□□□□ -0.02
USP49-203ENST00000394253 MAP7D3Q8IWC1 876 aa14.91□□□□□ -0.02
USP49-203ENST00000394253 POLR3CQ9BUI4 534 aaPredicted RBP14.91□□□□□ -0.02
USP49-203ENST00000394253 KIFC3Q9BVG8 833 aa14.91□□□□□ -0.02
USP49-203ENST00000394253 RGS16O15492 202 aaPredicted RBP14.91□□□□□ -0.02
USP49-203ENST00000394253 SLMAPQ14BN4 828 aa14.91□□□□□ -0.02
USP49-203ENST00000394253 HAUS1Q96CS2 278 aa14.91□□□□□ -0.02
USP49-203ENST00000394253 SIRT1Q96EB6 747 aa14.91□□□□□ -0.02
USP49-203ENST00000394253 MED4Q9NPJ6 270 aa14.91□□□□□ -0.02
USP49-203ENST00000394253 STX2P32856 288 aa14.91□□□□□ -0.02
USP49-203ENST00000394253 TBC1D8O95759 1140 aa14.91□□□□□ -0.02
USP49-203ENST00000394253 CALML3P27482 149 aa14.91□□□□□ -0.02
USP49-203ENST00000394253 RABEP2Q9H5N1 569 aa14.91□□□□□ -0.02
USP49-203ENST00000394253 SYT10Q6XYQ8 523 aa14.91□□□□□ -0.02
USP49-203ENST00000394253 CLTAP09496 248 aa14.9□□□□□ -0.02
USP49-203ENST00000394253 CASC4Q6P4E1 433 aa14.9□□□□□ -0.02
USP49-203ENST00000394253 WDR44Q5JSH3 913 aa14.9□□□□□ -0.02
USP49-203ENST00000394253 NBPF6Q5VWK0 638 aa14.9□□□□□ -0.02
USP49-203ENST00000394253 NBPF4Q96M43 638 aa14.9□□□□□ -0.02
USP49-203ENST00000394253 LMOD1P29536 600 aaPredicted RBP14.9□□□□□ -0.02
USP49-203ENST00000394253 JADE1Q6IE81 842 aa14.9□□□□□ -0.02
USP49-203ENST00000394253 MMEL1Q495T6 779 aa14.9□□□□□ -0.02
USP49-203ENST00000394253 GOLGA5Q8TBA6 731 aa14.9□□□□□ -0.02
USP49-203ENST00000394253 NSMCE1Q8WV22 266 aa14.9□□□□□ -0.02
USP49-203ENST00000394253 KRT23Q9C075 422 aa14.9□□□□□ -0.02
USP49-203ENST00000394253 EPB41P11171 864 aaKnown RBP14.9□□□□□ -0.02
USP49-203ENST00000394253 ZKSCAN3Q9BRR0 538 aa14.9□□□□□ -0.02
USP49-203ENST00000394253 CNNM2Q9H8M5 875 aa14.9□□□□□ -0.02
USP49-203ENST00000394253 IFIT5Q13325 482 aaKnown RBP14.9□□□□□ -0.02
USP49-203ENST00000394253 PPWD1Q96BP3 646 aaKnown RBP14.9□□□□□ -0.02
USP49-203ENST00000394253 SLC26A6Q9BXS9 759 aa14.9□□□□□ -0.02
USP49-203ENST00000394253 ORC3Q9UBD5 711 aaPredicted RBP14.9□□□□□ -0.02
USP49-203ENST00000394253 ASIC3Q9UHC3 531 aa14.9□□□□□ -0.02
USP49-203ENST00000394253 MKL2Q9ULH7 1088 aa14.9□□□□□ -0.02
USP49-203ENST00000394253 USP16Q9Y5T5 823 aa14.9□□□□□ -0.02
USP49-203ENST00000394253 DPH6Q7L8W6 267 aa14.89□□□□□ -0.03
USP49-203ENST00000394253 TFIP11Q9UBB9 837 aaKnown RBP14.89□□□□□ -0.03
USP49-203ENST00000394253 RNASELQ05823 741 aaKnown RBP14.89□□□□□ -0.03
USP49-203ENST00000394253 GDPD2Q9HCC8 539 aa14.89□□□□□ -0.03
USP49-203ENST00000394253 KIF11P52732 1056 aa14.89□□□□□ -0.03
USP49-203ENST00000394253 DAPK3O43293 454 aa14.89□□□□□ -0.03
USP49-203ENST00000394253 ENAHQ8N8S7 591 aaPredicted RBP14.89□□□□□ -0.03
USP49-203ENST00000394253 TXLNGQ9NUQ3 528 aa14.89□□□□□ -0.03
USP49-203ENST00000394253 GNAQP50148 359 aa14.89□□□□□ -0.03
USP49-203ENST00000394253 UBE3BQ7Z3V4 1068 aa14.89□□□□□ -0.03
USP49-203ENST00000394253 IL1RAPL2Q9NP60 686 aa14.89□□□□□ -0.03
USP49-203ENST00000394253 IMPACTQ9P2X3 320 aa14.89□□□□□ -0.03
USP49-203ENST00000394253 MAD1L1Q9Y6D9 718 aa14.89□□□□□ -0.03
USP49-203ENST00000394253 ATL3Q6DD88 541 aa14.88□□□□□ -0.03
USP49-203ENST00000394253 TSR2Q969E8 191 aaKnown RBP14.88□□□□□ -0.03
USP49-203ENST00000394253 PHF23Q9BUL5 403 aaPredicted RBP14.88□□□□□ -0.03
USP49-203ENST00000394253 FAM8A1Q9UBU6 413 aa14.88□□□□□ -0.03
USP49-203ENST00000394253 SMARCA2P51531 1590 aa14.88□□□□□ -0.03
USP49-203ENST00000394253 KARSQ15046 597 aaKnown RBP14.88□□□□□ -0.03
USP49-203ENST00000394253 EFCAB13Q8IY85 973 aa14.88□□□□□ -0.03
USP49-203ENST00000394253 MYOM3Q5VTT5 1437 aa14.88□□□□□ -0.03
USP49-203ENST00000394253 CCDC152Q4G0S7 254 aa14.88□□□□□ -0.03
USP49-203ENST00000394253 PFDN6O15212 129 aa14.88□□□□□ -0.03
USP49-203ENST00000394253 PANK2Q9BZ23 570 aa14.88□□□□□ -0.03
USP49-203ENST00000394253 OAS2P29728 719 aaKnown RBP14.88□□□□□ -0.03
USP49-203ENST00000394253 TRIM6Q9C030 488 aaPredicted RBP14.88□□□□□ -0.03
USP49-203ENST00000394253 EXOC6BQ9Y2D4 811 aa14.88□□□□□ -0.03
USP49-203ENST00000394253 SKIP12755 728 aa14.88□□□□□ -0.03
USP49-203ENST00000394253 KRT71Q3SY84 523 aa14.88□□□□□ -0.03
USP49-203ENST00000394253 MAIP1Q8WWC4 291 aa14.87□□□□□ -0.03
USP49-203ENST00000394253 KRT12Q99456 494 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms