RNA–Protein interactions for RNA: ENST00000394114.2

CASC3-202, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 2,792 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-202ENST00000394114 PCCAP05165 728 aaPredicted RBP7.09□□□□□ -1.27
CASC3-202ENST00000394114 HCLS1P14317 486 aaPredicted RBP7.09□□□□□ -1.27
CASC3-202ENST00000394114 RBL2Q08999 1139 aa7.09□□□□□ -1.27
CASC3-202ENST00000394114 TRIM28Q13263 835 aaKnown RBP7.09□□□□□ -1.27
CASC3-202ENST00000394114 CCDC57Q2TAC2 916 aa7.09□□□□□ -1.27
CASC3-202ENST00000394114 ZNF454Q8N9F8 522 aa7.09□□□□□ -1.27
CASC3-202ENST00000394114 GTF3C2Q8WUA4 911 aaPredicted RBP7.09□□□□□ -1.27
CASC3-202ENST00000394114 KCNB2Q92953 911 aa7.09□□□□□ -1.27
CASC3-202ENST00000394114 IQSEC3Q9UPP2 1182 aaPredicted RBP7.09□□□□□ -1.27
CASC3-202ENST00000394114 BRWD3Q6RI45 1802 aa7.09□□□□□ -1.27
CASC3-202ENST00000394114 CAMTA2O94983 1202 aa7.08□□□□□ -1.28
CASC3-202ENST00000394114 FKBP4Q02790 459 aaKnown RBP eCLIP7.08□□□□□ -1.28
CASC3-202ENST00000394114 KCNH2Q12809 1159 aa7.08□□□□□ -1.28
CASC3-202ENST00000394114 PTPROQ16827 1216 aa7.08□□□□□ -1.28
CASC3-202ENST00000394114 SUSD4Q5VX71 490 aa7.08□□□□□ -1.28
CASC3-202ENST00000394114 AMIGO3Q86WK7 504 aa7.08□□□□□ -1.28
CASC3-202ENST00000394114 PHTF2Q8N3S3 785 aa7.08□□□□□ -1.28
CASC3-202ENST00000394114 PLPP7Q8NBV4 271 aa7.08□□□□□ -1.28
CASC3-202ENST00000394114 NEUROD6Q96NK8 337 aa7.08□□□□□ -1.28
CASC3-202ENST00000394114 IL25Q9H293 177 aa7.08□□□□□ -1.28
CASC3-202ENST00000394114 BOLA2Q9H3K6 86 aa7.08□□□□□ -1.28
CASC3-202ENST00000394114 GREM2Q9H772 168 aa7.08□□□□□ -1.28
CASC3-202ENST00000394114 NIP7Q9Y221 180 aaKnown RBP eCLIP7.08□□□□□ -1.28
CASC3-202ENST00000394114 NHSQ6T4R5 1651 aa7.08□□□□□ -1.28
CASC3-202ENST00000394114 MYH3P11055 1940 aa7.08□□□□□ -1.28
CASC3-202ENST00000394114 ERVV-1B6SEH8 477 aa7.08□□□□□ -1.28
CASC3-202ENST00000394114 GLRX3O76003 335 aaKnown RBP7.08□□□□□ -1.28
CASC3-202ENST00000394114 CHMLP26374 656 aa7.08□□□□□ -1.28
CASC3-202ENST00000394114 ATN1P54259 1190 aaPredicted RBP7.08□□□□□ -1.28
CASC3-202ENST00000394114 SF3B2Q13435 895 aaKnown RBP7.08□□□□□ -1.28
CASC3-202ENST00000394114 TNNI3KQ59H18 835 aa7.08□□□□□ -1.28
CASC3-202ENST00000394114 ATG9AQ7Z3C6 839 aa7.08□□□□□ -1.28
CASC3-202ENST00000394114 ZNF34Q8IZ26 560 aa7.08□□□□□ -1.28
CASC3-202ENST00000394114 EDC3Q96F86 508 aaKnown RBP7.08□□□□□ -1.28
CASC3-202ENST00000394114 DBNDD2Q9BQY9 259 aa7.08□□□□□ -1.28
CASC3-202ENST00000394114 CCSER2Q9H7U1 834 aa7.08□□□□□ -1.28
CASC3-202ENST00000394114 CAPN10Q9HC96 672 aa7.08□□□□□ -1.28
CASC3-202ENST00000394114 DBNLQ9UJU6 430 aaKnown RBP7.08□□□□□ -1.28
CASC3-202ENST00000394114 DNMT3AQ9Y6K1 912 aaPredicted RBP7.08□□□□□ -1.28
CASC3-202ENST00000394114 FPGT-TNNI3KV9GXZ4 949 aa7.08□□□□□ -1.28
CASC3-202ENST00000394114 ERC2O15083 957 aa7.08□□□□□ -1.28
CASC3-202ENST00000394114 TIMM10P62072 90 aa7.08□□□□□ -1.28
CASC3-202ENST00000394114 TTLL11Q8NHH1 800 aa7.08□□□□□ -1.28
CASC3-202ENST00000394114 CEP126Q9P2H0 1117 aa7.08□□□□□ -1.28
CASC3-202ENST00000394114 SRP68Q9UHB9 627 aaKnown RBP7.08□□□□□ -1.28
CASC3-202ENST00000394114 AOX1Q06278 1338 aa7.07□□□□□ -1.28
CASC3-202ENST00000394114 TTC41PQ6P2S7 1318 aa7.07□□□□□ -1.28
CASC3-202ENST00000394114 EYA2O00167 538 aa7.07□□□□□ -1.28
CASC3-202ENST00000394114 TRIM37O94972 964 aa7.07□□□□□ -1.28
CASC3-202ENST00000394114 PLCG2P16885 1265 aa7.07□□□□□ -1.28
CASC3-202ENST00000394114 IGBP1P78318 339 aa7.07□□□□□ -1.28
CASC3-202ENST00000394114 IFIT5Q13325 482 aaKnown RBP7.07□□□□□ -1.28
CASC3-202ENST00000394114 SLFNL1Q499Z3 407 aa7.07□□□□□ -1.28
CASC3-202ENST00000394114 TMED8Q6PL24 325 aaPredicted RBP7.07□□□□□ -1.28
CASC3-202ENST00000394114 CWC27Q6UX04 472 aaKnown RBP7.07□□□□□ -1.28
CASC3-202ENST00000394114 CNTROBQ8N137 903 aa7.07□□□□□ -1.28
CASC3-202ENST00000394114 SIX5Q8N196 739 aa7.07□□□□□ -1.28
CASC3-202ENST00000394114 TATDN2Q93075 761 aa7.07□□□□□ -1.28
CASC3-202ENST00000394114 PRIMPOLQ96LW4 560 aa7.07□□□□□ -1.28
CASC3-202ENST00000394114 ESYT1Q9BSJ8 1104 aa7.07□□□□□ -1.28
CASC3-202ENST00000394114 SLKQ9H2G2 1235 aaPredicted RBP7.07□□□□□ -1.28
CASC3-202ENST00000394114 DNAAF2Q9NVR5 837 aaKnown RBP7.07□□□□□ -1.28
CASC3-202ENST00000394114 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.07□□□□□ -1.28
CASC3-202ENST00000394114 ITGA6P23229 1130 aa7.07□□□□□ -1.28
CASC3-202ENST00000394114 CTSWP56202 376 aa7.07□□□□□ -1.28
CASC3-202ENST00000394114 CCDC24Q8N4L8 307 aa7.07□□□□□ -1.28
CASC3-202ENST00000394114 RNF34Q969K3 372 aa7.07□□□□□ -1.28
CASC3-202ENST00000394114 KIF2CQ99661 725 aa7.07□□□□□ -1.28
CASC3-202ENST00000394114 USP26Q9BXU7 913 aa7.07□□□□□ -1.28
CASC3-202ENST00000394114 RREB1Q92766 1687 aa7.06□□□□□ -1.28
CASC3-202ENST00000394114 hCG_2014768A0A024R1R8 64 aa7.06□□□□□ -1.28
CASC3-202ENST00000394114 BECN1Q14457 450 aa7.06□□□□□ -1.28
CASC3-202ENST00000394114 CCDC181Q5TID7 509 aa7.06□□□□□ -1.28
CASC3-202ENST00000394114 USPL1Q5W0Q7 1092 aa7.06□□□□□ -1.28
CASC3-202ENST00000394114 KRT27Q7Z3Y8 459 aa7.06□□□□□ -1.28
CASC3-202ENST00000394114 CNPY4Q8N129 248 aa7.06□□□□□ -1.28
CASC3-202ENST00000394114 UTP14AQ9BVJ6 771 aaKnown RBP7.06□□□□□ -1.28
CASC3-202ENST00000394114 KLHL42Q9P2K6 505 aa7.06□□□□□ -1.28
CASC3-202ENST00000394114 PNMA3Q9UL41 463 aa7.06□□□□□ -1.28
CASC3-202ENST00000394114 SH3TC1Q8TE82 1336 aa7.06□□□□□ -1.28
CASC3-202ENST00000394114 USP42Q9H9J4 1324 aaKnown RBP7.06□□□□□ -1.28
CASC3-202ENST00000394114 REC8O95072 547 aa7.06□□□□□ -1.28
CASC3-202ENST00000394114 CSF1RP07333 972 aa7.06□□□□□ -1.28
CASC3-202ENST00000394114 COL9A1P20849 921 aa7.06□□□□□ -1.28
CASC3-202ENST00000394114 IL15P40933 162 aaPredicted RBP7.06□□□□□ -1.28
CASC3-202ENST00000394114 ATP1A2P50993 1020 aa7.06□□□□□ -1.28
CASC3-202ENST00000394114 FMR1Q06787 632 aaKnown RBP eCLIP7.06□□□□□ -1.28
CASC3-202ENST00000394114 EML3Q32P44 896 aa7.06□□□□□ -1.28
CASC3-202ENST00000394114 LDHAL6AQ6ZMR3 332 aa7.06□□□□□ -1.28
CASC3-202ENST00000394114 TMC7Q7Z402 723 aa7.06□□□□□ -1.28
CASC3-202ENST00000394114 TRIM50Q86XT4 487 aa7.06□□□□□ -1.28
CASC3-202ENST00000394114 RBCK1Q9BYM8 510 aa7.06□□□□□ -1.28
CASC3-202ENST00000394114 ACBD3Q9H3P7 528 aa7.06□□□□□ -1.28
CASC3-202ENST00000394114 LRRC4BQ9NT99 713 aa7.06□□□□□ -1.28
CASC3-202ENST00000394114 SEPT3Q9UH03 358 aa7.06□□□□□ -1.28
CASC3-202ENST00000394114 CDHR2Q9BYE9 1310 aa7.06□□□□□ -1.28
CASC3-202ENST00000394114 TAF1LQ8IZX4 1826 aa7.06□□□□□ -1.28
CASC3-202ENST00000394114 TAF1P21675 1872 aa7.05□□□□□ -1.28
CASC3-202ENST00000394114 A0A1B0GUL7 405 aa7.05□□□□□ -1.28
CASC3-202ENST00000394114 PDE8AO60658 829 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms