RNA–Protein interactions for RNA: ENST00000394023.7

SMARCC2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 4,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-203ENST00000394023 NDUFA8P51970 172 aa21.7■■□□□ 1.06
SMARCC2-203ENST00000394023 NKX1-1Q15270 411 aaPredicted RBP21.7■■□□□ 1.06
SMARCC2-203ENST00000394023 AKNAD1Q5T1N1 836 aa21.7■■□□□ 1.06
SMARCC2-203ENST00000394023 DENND2AQ9ULE3 1009 aa21.7■■□□□ 1.06
SMARCC2-203ENST00000394023 RRP9O43818 475 aaKnown RBP21.69■■□□□ 1.06
SMARCC2-203ENST00000394023 ZNF75DP51815 510 aa21.69■■□□□ 1.06
SMARCC2-203ENST00000394023 SKILP12757 684 aa21.69■■□□□ 1.06
SMARCC2-203ENST00000394023 RFC4P35249 363 aa21.69■■□□□ 1.06
SMARCC2-203ENST00000394023 TBC1D10CQ8IV04 446 aa21.69■■□□□ 1.06
SMARCC2-203ENST00000394023 UBAP1LF5GYI3 381 aa21.69■■□□□ 1.06
SMARCC2-203ENST00000394023 KCNQ2O43526 872 aa21.69■■□□□ 1.06
SMARCC2-203ENST00000394023 EXOSC10Q01780 885 aaKnown RBP21.69■■□□□ 1.06
SMARCC2-203ENST00000394023 ATL3Q6DD88 541 aa21.68■■□□□ 1.06
SMARCC2-203ENST00000394023 APOA5Q6Q788 366 aa21.68■■□□□ 1.06
SMARCC2-203ENST00000394023 RCOR1Q9UKL0 485 aa21.68■■□□□ 1.06
SMARCC2-203ENST00000394023 GNAT2P19087 354 aa21.68■■□□□ 1.06
SMARCC2-203ENST00000394023 DIS3L2Q8IYB7 885 aaKnown RBP21.68■■□□□ 1.06
SMARCC2-203ENST00000394023 CABP5Q9NP86 173 aa21.68■■□□□ 1.06
SMARCC2-203ENST00000394023 IFNKQ9P0W0 207 aa21.68■■□□□ 1.06
SMARCC2-203ENST00000394023 PYCARDQ9ULZ3 195 aa21.68■■□□□ 1.06
SMARCC2-203ENST00000394023 NLRP5P59047 1200 aa21.67■■□□□ 1.06
SMARCC2-203ENST00000394023 C11orf57Q6ZUT1 292 aaPredicted RBP21.67■■□□□ 1.06
SMARCC2-203ENST00000394023 LCORLQ8N3X6 602 aa21.67■■□□□ 1.06
SMARCC2-203ENST00000394023 ATP2B2Q01814 1243 aa21.67■■□□□ 1.06
SMARCC2-203ENST00000394023 PTPN14Q15678 1187 aa21.67■■□□□ 1.06
SMARCC2-203ENST00000394023 AATFQ9NY61 560 aaKnown RBP eCLIP21.67■■□□□ 1.06
SMARCC2-203ENST00000394023 AFMP43652 599 aa21.67■■□□□ 1.06
SMARCC2-203ENST00000394023 CLIC6Q96NY7 704 aa21.67■■□□□ 1.06
SMARCC2-203ENST00000394023 ZSWIM5Q9P217 1185 aa21.67■■□□□ 1.06
SMARCC2-203ENST00000394023 PALLDQ8WX93 1383 aa21.67■■□□□ 1.06
SMARCC2-203ENST00000394023 ADALQ6DHV7 355 aa21.66■■□□□ 1.06
SMARCC2-203ENST00000394023 CDCA7Q9BWT1 371 aaPredicted RBP21.66■■□□□ 1.06
SMARCC2-203ENST00000394023 CTDNEP1O95476 244 aa21.66■■□□□ 1.06
SMARCC2-203ENST00000394023 CYB5R4Q7L1T6 521 aa21.66■■□□□ 1.06
SMARCC2-203ENST00000394023 ERVV-1B6SEH8 477 aa21.66■■□□□ 1.06
SMARCC2-203ENST00000394023 CSF1RP07333 972 aa21.66■■□□□ 1.06
SMARCC2-203ENST00000394023 TMTC2Q8N394 836 aa21.66■■□□□ 1.06
SMARCC2-203ENST00000394023 TPTE2Q6XPS3 522 aa21.66■■□□□ 1.06
SMARCC2-203ENST00000394023 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.66■■□□□ 1.06
SMARCC2-203ENST00000394023 STRBPQ96SI9 672 aaKnown RBP21.66■■□□□ 1.06
SMARCC2-203ENST00000394023 ALDH8A1Q9H2A2 487 aaPredicted RBP21.66■■□□□ 1.06
SMARCC2-203ENST00000394023 STX8Q9UNK0 236 aa21.66■■□□□ 1.06
SMARCC2-203ENST00000394023 CACNA1FO60840 1977 aa21.65■■□□□ 1.06
SMARCC2-203ENST00000394023 BTBD18B2RXH4 712 aa21.65■■□□□ 1.06
SMARCC2-203ENST00000394023 SMARCC2Q8TAQ2 1214 aa21.65■■□□□ 1.06
SMARCC2-203ENST00000394023 MCM9Q9NXL9 1143 aa21.65■■□□□ 1.06
SMARCC2-203ENST00000394023 RGPD2P0DJD1 1756 aa21.65■■□□□ 1.06
SMARCC2-203ENST00000394023 FAM208AQ9UK61 1670 aaKnown RBP21.65■■□□□ 1.06
SMARCC2-203ENST00000394023 ERFEQ4G0M1 354 aa21.65■■□□□ 1.06
SMARCC2-203ENST00000394023 CRNKL1Q9BZJ0 848 aaKnown RBP21.65■■□□□ 1.06
SMARCC2-203ENST00000394023 COL15A1P39059 1388 aa21.65■■□□□ 1.06
SMARCC2-203ENST00000394023 CEP131Q9UPN4 1083 aa21.65■■□□□ 1.06
SMARCC2-203ENST00000394023 V9GY48 417 aaPredicted RBP21.65■■□□□ 1.06
SMARCC2-203ENST00000394023 GOLPH3LQ9H4A5 285 aa21.64■■□□□ 1.05
SMARCC2-203ENST00000394023 RTCBQ9Y3I0 505 aaKnown RBP21.64■■□□□ 1.05
SMARCC2-203ENST00000394023 CYP2D7A0A087X1C5 515 aa21.64■■□□□ 1.05
SMARCC2-203ENST00000394023 TOM1O60784 492 aa21.64■■□□□ 1.05
SMARCC2-203ENST00000394023 PFKFB1P16118 471 aa21.64■■□□□ 1.05
SMARCC2-203ENST00000394023 MB21D2Q8IYB1 491 aaPredicted RBP21.64■■□□□ 1.05
SMARCC2-203ENST00000394023 AK7Q96M32 723 aa21.64■■□□□ 1.05
SMARCC2-203ENST00000394023 ZMYM6O95789 1325 aa21.63■■□□□ 1.05
SMARCC2-203ENST00000394023 PPARAQ07869 468 aa21.63■■□□□ 1.05
SMARCC2-203ENST00000394023 LINC00301Q8NCQ3 95 aa21.63■■□□□ 1.05
SMARCC2-203ENST00000394023 CHD2O14647 1828 aaKnown RBP21.63■■□□□ 1.05
SMARCC2-203ENST00000394023 VAT1LQ9HCJ6 419 aa21.63■■□□□ 1.05
SMARCC2-203ENST00000394023 RFX7Q2KHR2 1363 aa21.62■■□□□ 1.05
SMARCC2-203ENST00000394023 YEATS4O95619 227 aa21.62■■□□□ 1.05
SMARCC2-203ENST00000394023 UBASH3AP57075 661 aa21.62■■□□□ 1.05
SMARCC2-203ENST00000394023 DYNLL1P63167 89 aaKnown RBP21.62■■□□□ 1.05
SMARCC2-203ENST00000394023 FAM47AQ5JRC9 791 aa21.62■■□□□ 1.05
SMARCC2-203ENST00000394023 ZNF444Q8N0Y2 327 aaPredicted RBP21.62■■□□□ 1.05
SMARCC2-203ENST00000394023 DHX58Q96C10 678 aa21.62■■□□□ 1.05
SMARCC2-203ENST00000394023 USP17L12C9JPN9 530 aa21.62■■□□□ 1.05
SMARCC2-203ENST00000394023 USP17L21D6R901 530 aa21.62■■□□□ 1.05
SMARCC2-203ENST00000394023 RPGRQ92834 1020 aaKnown RBP21.62■■□□□ 1.05
SMARCC2-203ENST00000394023 TMX1Q9H3N1 280 aa21.62■■□□□ 1.05
SMARCC2-203ENST00000394023 RTEL1Q9NZ71 1219 aa21.62■■□□□ 1.05
SMARCC2-203ENST00000394023 VPS54Q9P1Q0 977 aa21.62■■□□□ 1.05
SMARCC2-203ENST00000394023 CCNL1Q9UK58 526 aaPredicted RBP21.62■■□□□ 1.05
SMARCC2-203ENST00000394023 C6orf229H3BNL8 230 aa21.62■■□□□ 1.05
SMARCC2-203ENST00000394023 HIBADHP31937 336 aaKnown RBP21.62■■□□□ 1.05
SMARCC2-203ENST00000394023 CPLX3Q8WVH0 158 aa21.62■■□□□ 1.05
SMARCC2-203ENST00000394023 SMARCE1Q969G3 411 aa21.62■■□□□ 1.05
SMARCC2-203ENST00000394023 KIAA1468Q9P260 1216 aa21.62■■□□□ 1.05
SMARCC2-203ENST00000394023 NEDD4P46934 1319 aa21.62■■□□□ 1.05
SMARCC2-203ENST00000394023 TPM1P09493 284 aa21.61■■□□□ 1.05
SMARCC2-203ENST00000394023 TOP1P11387 765 aaKnown RBP21.61■■□□□ 1.05
SMARCC2-203ENST00000394023 KIF23Q02241 960 aaPredicted RBP21.61■■□□□ 1.05
SMARCC2-203ENST00000394023 PDE4BQ07343 736 aa21.61■■□□□ 1.05
SMARCC2-203ENST00000394023 SENP2Q9HC62 589 aa21.61■■□□□ 1.05
SMARCC2-203ENST00000394023 KCNH3Q9ULD8 1083 aa21.61■■□□□ 1.05
SMARCC2-203ENST00000394023 CDHR2Q9BYE9 1310 aa21.61■■□□□ 1.05
SMARCC2-203ENST00000394023 SH2B2O14492 632 aaPredicted RBP21.61■■□□□ 1.05
SMARCC2-203ENST00000394023 RPS8P62241 208 aaKnown RBP21.61■■□□□ 1.05
SMARCC2-203ENST00000394023 KRI1Q8N9T8 703 aaKnown RBP21.61■■□□□ 1.05
SMARCC2-203ENST00000394023 SLIT3O75094 1523 aa21.61■■□□□ 1.05
SMARCC2-203ENST00000394023 ZNF654Q8IZM8 581 aa21.61■■□□□ 1.05
SMARCC2-203ENST00000394023 PCMTD1Q96MG8 357 aaPredicted RBP21.61■■□□□ 1.05
SMARCC2-203ENST00000394023 DYNC1I1O14576 645 aa21.6■■□□□ 1.05
SMARCC2-203ENST00000394023 CBFA2T2O43439 604 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms