RNA–Protein interactions for RNA: ENST00000393330.6

TSPAN8-202, Transcript of tetraspanin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN8, Length 1,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN8-202ENST00000393330 TRIM22Q8IYM9 498 aa6.83□□□□□ -1.32
TSPAN8-202ENST00000393330 OGFOD1Q8N543 542 aa6.83□□□□□ -1.32
TSPAN8-202ENST00000393330 TPCN2Q8NHX9 752 aa6.83□□□□□ -1.32
TSPAN8-202ENST00000393330 SLC4A9Q96Q91 983 aa6.83□□□□□ -1.32
TSPAN8-202ENST00000393330 PPP1R12CQ9BZL4 782 aa6.83□□□□□ -1.32
TSPAN8-202ENST00000393330 ZNF358Q9NW07 568 aa6.83□□□□□ -1.32
TSPAN8-202ENST00000393330 BRPF3Q9ULD4 1205 aa6.83□□□□□ -1.32
TSPAN8-202ENST00000393330 ADAMTS7Q9UKP4 1686 aa6.83□□□□□ -1.32
TSPAN8-202ENST00000393330 SBF1O95248 1867 aa6.83□□□□□ -1.32
TSPAN8-202ENST00000393330 LOC102724428A0A0B4J2F2 783 aa6.82□□□□□ -1.32
TSPAN8-202ENST00000393330 A6NJY4 79 aa6.82□□□□□ -1.32
TSPAN8-202ENST00000393330 GPR25O00155 361 aa6.82□□□□□ -1.32
TSPAN8-202ENST00000393330 C5P01031 1676 aa6.82□□□□□ -1.32
TSPAN8-202ENST00000393330 EPHX2P34913 555 aa6.82□□□□□ -1.32
TSPAN8-202ENST00000393330 SIK1P57059 783 aa6.82□□□□□ -1.32
TSPAN8-202ENST00000393330 NOGQ13253 232 aa6.82□□□□□ -1.32
TSPAN8-202ENST00000393330 CIAPIN1Q6FI81 312 aa6.82□□□□□ -1.32
TSPAN8-202ENST00000393330 FOXR1Q6PIV2 292 aa6.82□□□□□ -1.32
TSPAN8-202ENST00000393330 ZSCAN1Q8NBB4 408 aa6.82□□□□□ -1.32
TSPAN8-202ENST00000393330 LINC00116Q8NCU8 138 aa6.82□□□□□ -1.32
TSPAN8-202ENST00000393330 GTPBP3Q969Y2 492 aaKnown RBP6.82□□□□□ -1.32
TSPAN8-202ENST00000393330 ZNF837Q96EG3 531 aaPredicted RBP6.82□□□□□ -1.32
TSPAN8-202ENST00000393330 NIFKQ9BYG3 293 aaKnown RBP6.82□□□□□ -1.32
TSPAN8-202ENST00000393330 THSD7BQ9C0I4 1608 aa6.82□□□□□ -1.32
TSPAN8-202ENST00000393330 QRICH2Q9H0J4 1663 aa6.82□□□□□ -1.32
TSPAN8-202ENST00000393330 RAB3GAP2Q9H2M9 1393 aa6.82□□□□□ -1.32
TSPAN8-202ENST00000393330 DNAAF2Q9NVR5 837 aaKnown RBP6.82□□□□□ -1.32
TSPAN8-202ENST00000393330 CASP8AP2Q9UKL3 1982 aa6.82□□□□□ -1.32
TSPAN8-202ENST00000393330 KIAA1024Q9UPX6 916 aa6.82□□□□□ -1.32
TSPAN8-202ENST00000393330 MAFBQ9Y5Q3 323 aaPredicted RBP6.82□□□□□ -1.32
TSPAN8-202ENST00000393330 C4BP0C0L5 1744 aa6.82□□□□□ -1.32
TSPAN8-202ENST00000393330 CGNL1Q0VF96 1302 aa6.81□□□□□ -1.32
TSPAN8-202ENST00000393330 TTC21AQ8NDW8 1320 aa6.81□□□□□ -1.32
TSPAN8-202ENST00000393330 A0A1B0GTH6 734 aa6.81□□□□□ -1.32
TSPAN8-202ENST00000393330 PATL2C9JE40 543 aaKnown RBP6.81□□□□□ -1.32
TSPAN8-202ENST00000393330 MSX1P28360 303 aa6.81□□□□□ -1.32
TSPAN8-202ENST00000393330 LMOD1P29536 600 aaPredicted RBP6.81□□□□□ -1.32
TSPAN8-202ENST00000393330 SRPK2P78362 688 aaKnown RBP6.81□□□□□ -1.32
TSPAN8-202ENST00000393330 KCNA1Q09470 495 aa6.81□□□□□ -1.32
TSPAN8-202ENST00000393330 ZNF594Q96JF6 807 aaPredicted RBP6.81□□□□□ -1.32
TSPAN8-202ENST00000393330 NUCKS1Q9H1E3 243 aaKnown RBP6.81□□□□□ -1.32
TSPAN8-202ENST00000393330 PRDM6Q9NQX0 595 aa6.81□□□□□ -1.32
TSPAN8-202ENST00000393330 CABP1Q9NZU7 370 aa6.81□□□□□ -1.32
TSPAN8-202ENST00000393330 USP3Q9Y6I4 520 aa6.81□□□□□ -1.32
TSPAN8-202ENST00000393330 LTBP3Q9NS15 1303 aa6.81□□□□□ -1.32
TSPAN8-202ENST00000393330 CDK2AP1O14519 115 aa6.81□□□□□ -1.32
TSPAN8-202ENST00000393330 BRD1O95696 1058 aa6.81□□□□□ -1.32
TSPAN8-202ENST00000393330 RASA1P20936 1047 aa6.81□□□□□ -1.32
TSPAN8-202ENST00000393330 CNPY4Q8N129 248 aa6.81□□□□□ -1.32
TSPAN8-202ENST00000393330 PGBD3Q8N328 593 aa6.81□□□□□ -1.32
TSPAN8-202ENST00000393330 GMCL1Q96IK5 515 aa6.81□□□□□ -1.32
TSPAN8-202ENST00000393330 RUBCNLQ9H714 662 aa6.81□□□□□ -1.32
TSPAN8-202ENST00000393330 LTBP1Q14766 1721 aa6.8□□□□□ -1.32
TSPAN8-202ENST00000393330 ADGRB1O14514 1584 aa6.8□□□□□ -1.32
TSPAN8-202ENST00000393330 BRCA1P38398 1863 aaKnown RBP6.8□□□□□ -1.32
TSPAN8-202ENST00000393330 TTC21BQ7Z4L5 1316 aa6.8□□□□□ -1.32
TSPAN8-202ENST00000393330 MTFR1Q15390 333 aa6.8□□□□□ -1.32
TSPAN8-202ENST00000393330 TBCELQ5QJ74 424 aa6.8□□□□□ -1.32
TSPAN8-202ENST00000393330 SAPCD2Q86UD0 394 aa6.8□□□□□ -1.32
TSPAN8-202ENST00000393330 PSMD1Q99460 953 aa6.8□□□□□ -1.32
TSPAN8-202ENST00000393330 RBM19Q9Y4C8 960 aaKnown RBP6.8□□□□□ -1.32
TSPAN8-202ENST00000393330 MEGF6O75095 1541 aa6.79□□□□□ -1.32
TSPAN8-202ENST00000393330 LORP23490 312 aaPredicted RBP6.79□□□□□ -1.32
TSPAN8-202ENST00000393330 CST9Q5W186 159 aa6.79□□□□□ -1.32
TSPAN8-202ENST00000393330 FTSJ3Q8IY81 847 aaKnown RBP6.79□□□□□ -1.32
TSPAN8-202ENST00000393330 LARGE2Q8N3Y3 721 aa6.79□□□□□ -1.32
TSPAN8-202ENST00000393330 YTHDC1Q96MU7 727 aaKnown RBP6.79□□□□□ -1.32
TSPAN8-202ENST00000393330 TRERF1Q96PN7 1200 aa6.79□□□□□ -1.32
TSPAN8-202ENST00000393330 TAOK3Q9H2K8 898 aa6.79□□□□□ -1.32
TSPAN8-202ENST00000393330 CHMP4BQ9H444 224 aaKnown RBP6.79□□□□□ -1.32
TSPAN8-202ENST00000393330 STK17AQ9UEE5 414 aa6.79□□□□□ -1.32
TSPAN8-202ENST00000393330 IQSEC3Q9UPP2 1182 aaPredicted RBP6.79□□□□□ -1.32
TSPAN8-202ENST00000393330 C4AP0C0L4 1744 aa6.79□□□□□ -1.32
TSPAN8-202ENST00000393330 SMG6Q86US8 1419 aaKnown RBP6.78□□□□□ -1.32
TSPAN8-202ENST00000393330 SFI1A8K8P3 1242 aa6.78□□□□□ -1.32
TSPAN8-202ENST00000393330 H0YIN7 160 aa6.78□□□□□ -1.32
TSPAN8-202ENST00000393330 RPS6KA4O75676 772 aa6.78□□□□□ -1.32
TSPAN8-202ENST00000393330 RFX1P22670 979 aa6.78□□□□□ -1.32
TSPAN8-202ENST00000393330 CCDC27Q2M243 656 aa6.78□□□□□ -1.32
TSPAN8-202ENST00000393330 INTS3Q68E01 1043 aaKnown RBP6.78□□□□□ -1.32
TSPAN8-202ENST00000393330 FAM177A1Q8N128 213 aaPredicted RBP6.78□□□□□ -1.32
TSPAN8-202ENST00000393330 SECISBP2LQ93073 1101 aaKnown RBP6.78□□□□□ -1.32
TSPAN8-202ENST00000393330 VRTNQ9H8Y1 702 aa6.78□□□□□ -1.32
TSPAN8-202ENST00000393330 SCHIP1Q9P0W5 487 aaPredicted RBP6.78□□□□□ -1.32
TSPAN8-202ENST00000393330 TRIOBPQ9H2D6 2365 aa6.77□□□□□ -1.33
TSPAN8-202ENST00000393330 GAS6Q14393 721 aa6.77□□□□□ -1.33
TSPAN8-202ENST00000393330 CDCA8Q53HL2 280 aa6.77□□□□□ -1.33
TSPAN8-202ENST00000393330 SOGA3Q5TF21 947 aa6.77□□□□□ -1.33
TSPAN8-202ENST00000393330 CERS3Q8IU89 383 aa6.77□□□□□ -1.33
TSPAN8-202ENST00000393330 SLC9A9Q8IVB4 645 aa6.77□□□□□ -1.33
TSPAN8-202ENST00000393330 DCAF11Q8TEB1 546 aa6.77□□□□□ -1.33
TSPAN8-202ENST00000393330 PIGBQ92521 554 aa6.77□□□□□ -1.33
TSPAN8-202ENST00000393330 CWC22Q9HCG8 908 aaKnown RBP6.77□□□□□ -1.33
TSPAN8-202ENST00000393330 HDAC9Q9UKV0 1011 aa6.77□□□□□ -1.33
TSPAN8-202ENST00000393330 UBR3Q6ZT12 1888 aa6.77□□□□□ -1.33
TSPAN8-202ENST00000393330 INSRP06213 1382 aa6.77□□□□□ -1.33
TSPAN8-202ENST00000393330 CARNS1A5YM72 827 aa6.76□□□□□ -1.33
TSPAN8-202ENST00000393330 FAM181BA6NEQ2 426 aa6.76□□□□□ -1.33
TSPAN8-202ENST00000393330 TRPA1O75762 1119 aa6.76□□□□□ -1.33
TSPAN8-202ENST00000393330 THBS1P07996 1170 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms