RNA–Protein interactions for RNA: ENST00000392901.10

SHTN1-203, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHTN1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-203ENST00000392901 AATFQ9NY61 560 aaKnown RBP eCLIP20.79■□□□□ 0.92
SHTN1-203ENST00000392901 KLF18A0A0U1RQI7 1052 aa20.79■□□□□ 0.92
SHTN1-203ENST00000392901 MINDY4BA8MYZ0 360 aa20.79■□□□□ 0.92
SHTN1-203ENST00000392901 SLC15A2Q16348 729 aa20.79■□□□□ 0.92
SHTN1-203ENST00000392901 AKNAD1Q5T1N1 836 aa20.79■□□□□ 0.92
SHTN1-203ENST00000392901 L1TD1Q5T7N2 865 aaKnown RBP20.79■□□□□ 0.92
SHTN1-203ENST00000392901 CAVIN1Q6NZI2 390 aaKnown RBP20.79■□□□□ 0.92
SHTN1-203ENST00000392901 DZIP1Q86YF9 867 aaKnown RBP20.79■□□□□ 0.92
SHTN1-203ENST00000392901 WDR66Q8TBY9 1149 aa20.79■□□□□ 0.92
SHTN1-203ENST00000392901 CD209Q9NNX6 404 aa20.79■□□□□ 0.92
SHTN1-203ENST00000392901 TOMM22Q9NS69 142 aa20.79■□□□□ 0.92
SHTN1-203ENST00000392901 PODXL2Q9NZ53 605 aa20.79■□□□□ 0.92
SHTN1-203ENST00000392901 TACC3Q9Y6A5 838 aa20.79■□□□□ 0.92
SHTN1-203ENST00000392901 PPFIA3O75145 1194 aa20.78■□□□□ 0.92
SHTN1-203ENST00000392901 PDE6BP35913 854 aa20.78■□□□□ 0.92
SHTN1-203ENST00000392901 SPTY2D1Q68D10 685 aaPredicted RBP20.78■□□□□ 0.92
SHTN1-203ENST00000392901 MFSD6Q6ZSS7 791 aa20.78■□□□□ 0.92
SHTN1-203ENST00000392901 FBXO41Q8TF61 875 aa20.78■□□□□ 0.92
SHTN1-203ENST00000392901 ANKRD31Q8N7Z5 1873 aa20.78■□□□□ 0.92
SHTN1-203ENST00000392901 WDR19Q8NEZ3 1342 aa20.78■□□□□ 0.92
SHTN1-203ENST00000392901 NPR1P16066 1061 aa20.78■□□□□ 0.92
SHTN1-203ENST00000392901 EVCP57679 992 aa20.78■□□□□ 0.92
SHTN1-203ENST00000392901 RRP12Q5JTH9 1297 aaKnown RBP20.78■□□□□ 0.92
SHTN1-203ENST00000392901 CDC37L1Q7L3B6 337 aa20.78■□□□□ 0.92
SHTN1-203ENST00000392901 RAB11FIP4Q86YS3 637 aa20.78■□□□□ 0.92
SHTN1-203ENST00000392901 SP8Q8IXZ3 490 aa20.78■□□□□ 0.92
SHTN1-203ENST00000392901 FAM184AQ8NB25 1140 aa20.78■□□□□ 0.92
SHTN1-203ENST00000392901 LLPHQ9BRT6 129 aaKnown RBP20.78■□□□□ 0.92
SHTN1-203ENST00000392901 KDM4AO75164 1064 aa20.77■□□□□ 0.92
SHTN1-203ENST00000392901 CTDNEP1O95476 244 aa20.77■□□□□ 0.92
SHTN1-203ENST00000392901 LDHBP07195 334 aaKnown RBP20.77■□□□□ 0.92
SHTN1-203ENST00000392901 XRCC6P12956 609 aaKnown RBP eCLIP20.77■□□□□ 0.92
SHTN1-203ENST00000392901 PPARAQ07869 468 aa20.77■□□□□ 0.92
SHTN1-203ENST00000392901 NSUN7Q8NE18 718 aaKnown RBP20.77■□□□□ 0.92
SHTN1-203ENST00000392901 RBM27Q9P2N5 1060 aaKnown RBP20.77■□□□□ 0.92
SHTN1-203ENST00000392901 OLFM4Q6UX06 510 aa20.76■□□□□ 0.91
SHTN1-203ENST00000392901 TMC4Q7Z404 712 aa20.76■□□□□ 0.91
SHTN1-203ENST00000392901 USP48Q86UV5 1035 aa20.76■□□□□ 0.91
SHTN1-203ENST00000392901 SMARCC2Q8TAQ2 1214 aa20.76■□□□□ 0.91
SHTN1-203ENST00000392901 STK32BQ9NY57 414 aa20.76■□□□□ 0.91
SHTN1-203ENST00000392901 ZSWIM5Q9P217 1185 aa20.76■□□□□ 0.91
SHTN1-203ENST00000392901 ANGEL1Q9UNK9 670 aaKnown RBP20.76■□□□□ 0.91
SHTN1-203ENST00000392901 CNPY2Q9Y2B0 182 aa20.76■□□□□ 0.91
SHTN1-203ENST00000392901 ATP6V0A2Q9Y487 856 aa20.76■□□□□ 0.91
SHTN1-203ENST00000392901 ATP6V1DQ9Y5K8 247 aa20.76■□□□□ 0.91
SHTN1-203ENST00000392901 PTPDC1A2A3K4 754 aa20.76■□□□□ 0.91
SHTN1-203ENST00000392901 GOLGA8BA8MQT2 603 aa20.76■□□□□ 0.91
SHTN1-203ENST00000392901 FERMT3Q86UX7 667 aa20.76■□□□□ 0.91
SHTN1-203ENST00000392901 CNNM2Q9H8M5 875 aa20.76■□□□□ 0.91
SHTN1-203ENST00000392901 SALL1Q9NSC2 1324 aa20.75■□□□□ 0.91
SHTN1-203ENST00000392901 ZBTB22O15209 634 aa20.75■□□□□ 0.91
SHTN1-203ENST00000392901 GADD45BO75293 160 aaPredicted RBP20.75■□□□□ 0.91
SHTN1-203ENST00000392901 PDIA4P13667 645 aaKnown RBP20.75■□□□□ 0.91
SHTN1-203ENST00000392901 ALDH1B1P30837 517 aa20.75■□□□□ 0.91
SHTN1-203ENST00000392901 GRIK5Q16478 980 aa20.75■□□□□ 0.91
SHTN1-203ENST00000392901 STAG1Q8WVM7 1258 aa20.75■□□□□ 0.91
SHTN1-203ENST00000392901 KRT23Q9C075 422 aa20.75■□□□□ 0.91
SHTN1-203ENST00000392901 SMIM22K7EJ46 135 aa20.75■□□□□ 0.91
SHTN1-203ENST00000392901 ZNF622Q969S3 477 aaKnown RBP eCLIP20.75■□□□□ 0.917e-7■■■□□ 17.3
SHTN1-203ENST00000392901 NRXN2Q9P2S2 1712 aa20.75■□□□□ 0.91
SHTN1-203ENST00000392901 SH2B2O14492 632 aaPredicted RBP20.74■□□□□ 0.91
SHTN1-203ENST00000392901 RIMBP2O15034 1052 aa20.74■□□□□ 0.91
SHTN1-203ENST00000392901 MASTLQ96GX5 879 aa20.74■□□□□ 0.91
SHTN1-203ENST00000392901 SENP2Q9HC62 589 aa20.74■□□□□ 0.91
SHTN1-203ENST00000392901 CYP2D7A0A087X1C5 515 aa20.73■□□□□ 0.91
SHTN1-203ENST00000392901 IL1R1P14778 569 aa20.73■□□□□ 0.91
SHTN1-203ENST00000392901 IGDCC4Q8TDY8 1250 aa20.73■□□□□ 0.91
SHTN1-203ENST00000392901 TMEM87BQ96K49 555 aa20.73■□□□□ 0.91
SHTN1-203ENST00000392901 CRNKL1Q9BZJ0 848 aaKnown RBP20.73■□□□□ 0.91
SHTN1-203ENST00000392901 HPS5Q9UPZ3 1129 aa20.73■□□□□ 0.91
SHTN1-203ENST00000392901 RGPD3A6NKT7 1758 aaPredicted RBP20.73■□□□□ 0.91
SHTN1-203ENST00000392901 RGPD4Q7Z3J3 1758 aa20.73■□□□□ 0.91
SHTN1-203ENST00000392901 FOSBP53539 338 aa20.73■□□□□ 0.91
SHTN1-203ENST00000392901 HMGN5P82970 282 aaKnown RBP20.73■□□□□ 0.91
SHTN1-203ENST00000392901 DIXDC1Q155Q3 683 aa20.73■□□□□ 0.91
SHTN1-203ENST00000392901 ZSCAN23Q3MJ62 389 aa20.73■□□□□ 0.91
SHTN1-203ENST00000392901 TMEM67Q5HYA8 995 aa20.73■□□□□ 0.91
SHTN1-203ENST00000392901 RNF41Q9H4P4 317 aaPredicted RBP20.73■□□□□ 0.91
SHTN1-203ENST00000392901 H3BQV1 296 aa20.72■□□□□ 0.91
SHTN1-203ENST00000392901 IFIT3O14879 490 aaKnown RBP20.72■□□□□ 0.91
SHTN1-203ENST00000392901 DNM1Q05193 864 aaKnown RBP20.72■□□□□ 0.91
SHTN1-203ENST00000392901 IFFO2Q5TF58 517 aa20.72■□□□□ 0.91
SHTN1-203ENST00000392901 NFXL1Q6ZNB6 911 aa20.72■□□□□ 0.91
SHTN1-203ENST00000392901 MPNDQ8N594 471 aa20.72■□□□□ 0.91
SHTN1-203ENST00000392901 CHMP4CQ96CF2 233 aa20.72■□□□□ 0.91
SHTN1-203ENST00000392901 ZKSCAN3Q9BRR0 538 aa20.72■□□□□ 0.91
SHTN1-203ENST00000392901 GRPEL1Q9HAV7 217 aa20.72■□□□□ 0.91
SHTN1-203ENST00000392901 TMEM63CQ9P1W3 806 aa20.72■□□□□ 0.91
SHTN1-203ENST00000392901 USP17L12C9JPN9 530 aa20.72■□□□□ 0.91
SHTN1-203ENST00000392901 USP17L21D6R901 530 aa20.72■□□□□ 0.91
SHTN1-203ENST00000392901 SF3B2Q13435 895 aaKnown RBP20.72■□□□□ 0.91
SHTN1-203ENST00000392901 DEFB132Q7Z7B7 95 aa20.72■□□□□ 0.91
SHTN1-203ENST00000392901 PANK2Q9BZ23 570 aa20.72■□□□□ 0.91
SHTN1-203ENST00000392901 CCDC88AQ3V6T2 1871 aa20.71■□□□□ 0.91
SHTN1-203ENST00000392901 RXRAP19793 462 aa20.71■□□□□ 0.91
SHTN1-203ENST00000392901 CTR9Q6PD62 1173 aa20.71■□□□□ 0.91
SHTN1-203ENST00000392901 C2CD5Q86YS7 1000 aa20.71■□□□□ 0.91
SHTN1-203ENST00000392901 TMX4Q9H1E5 349 aaPredicted RBP20.71■□□□□ 0.91
SHTN1-203ENST00000392901 LY9Q9HBG7 655 aa20.71■□□□□ 0.91
SHTN1-203ENST00000392901 DCP1AQ9NPI6 582 aaPredicted RBP20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms