RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 PIH1D3Q9NQM4 214 aaKnown RBP12.55□□□□□ -0.4
BRF1-204ENST00000392557 TOMM22Q9NS69 142 aa12.55□□□□□ -0.4
BRF1-204ENST00000392557 GJB4Q9NTQ9 266 aa12.55□□□□□ -0.4
BRF1-204ENST00000392557 CAMTA2O94983 1202 aa12.55□□□□□ -0.4
BRF1-204ENST00000392557 SLC3A2P08195 630 aaKnown RBP12.55□□□□□ -0.4
BRF1-204ENST00000392557 CCDC152Q4G0S7 254 aa12.55□□□□□ -0.4
BRF1-204ENST00000392557 MEX3CQ5U5Q3 659 aaKnown RBP12.55□□□□□ -0.4
BRF1-204ENST00000392557 MNS1Q8NEH6 495 aa12.55□□□□□ -0.4
BRF1-204ENST00000392557 APPBP2Q92624 585 aa12.55□□□□□ -0.4
BRF1-204ENST00000392557 GOLGA8BA8MQT2 603 aa12.54□□□□□ -0.4
BRF1-204ENST00000392557 SLC5A1P13866 664 aa12.54□□□□□ -0.4
BRF1-204ENST00000392557 RXRAP19793 462 aa12.54□□□□□ -0.4
BRF1-204ENST00000392557 IQCB1Q15051 598 aa12.54□□□□□ -0.4
BRF1-204ENST00000392557 PUM3Q15397 648 aaKnown RBP12.54□□□□□ -0.4
BRF1-204ENST00000392557 KRT222Q8N1A0 295 aa12.54□□□□□ -0.4
BRF1-204ENST00000392557 CTNNA3Q9UI47 895 aa12.54□□□□□ -0.4
BRF1-204ENST00000392557 FBXO3Q9UK99 471 aa12.54□□□□□ -0.4
BRF1-204ENST00000392557 WWC3Q9ULE0 1092 aa12.54□□□□□ -0.4
BRF1-204ENST00000392557 RIC1Q4ADV7 1423 aa12.54□□□□□ -0.4
BRF1-204ENST00000392557 PHLPP1O60346 1717 aa12.54□□□□□ -0.4
BRF1-204ENST00000392557 KIF20AO95235 890 aa12.54□□□□□ -0.4
BRF1-204ENST00000392557 SLU7O95391 586 aaKnown RBP12.54□□□□□ -0.4
BRF1-204ENST00000392557 BCAMP50895 628 aa12.54□□□□□ -0.4
BRF1-204ENST00000392557 CFAP100Q494V2 611 aa12.54□□□□□ -0.4
BRF1-204ENST00000392557 MRFAP1L1Q96HT8 127 aa12.54□□□□□ -0.4
BRF1-204ENST00000392557 XPO4Q9C0E2 1151 aaKnown RBP12.54□□□□□ -0.4
BRF1-204ENST00000392557 ORC3Q9UBD5 711 aaPredicted RBP12.54□□□□□ -0.4
BRF1-204ENST00000392557 PCDHA7Q9UN72 937 aa12.54□□□□□ -0.4
BRF1-204ENST00000392557 DOT1LQ8TEK3 1739 aa12.54□□□□□ -0.4
BRF1-204ENST00000392557 ZNF532Q9HCE3 1301 aa12.54□□□□□ -0.4
BRF1-204ENST00000392557 ZNF213O14771 459 aa12.54□□□□□ -0.4
BRF1-204ENST00000392557 NDUFA8P51970 172 aa12.54□□□□□ -0.4
BRF1-204ENST00000392557 DPCR1Q3MIW9 517 aa12.54□□□□□ -0.4
BRF1-204ENST00000392557 ZNF397Q8NF99 534 aaPredicted RBP12.54□□□□□ -0.4
BRF1-204ENST00000392557 AIDAQ96BJ3 306 aa12.54□□□□□ -0.4
BRF1-204ENST00000392557 TRERF1Q96PN7 1200 aa12.54□□□□□ -0.4
BRF1-204ENST00000392557 ABCF2Q9UG63 623 aa12.54□□□□□ -0.4
BRF1-204ENST00000392557 ZFYP08048 801 aaPredicted RBP12.53□□□□□ -0.4
BRF1-204ENST00000392557 CDK11BP21127 795 aaKnown RBP12.53□□□□□ -0.4
BRF1-204ENST00000392557 ERCC6LQ2NKX8 1250 aa12.53□□□□□ -0.4
BRF1-204ENST00000392557 TSGA10IPQ3SY00 556 aa12.53□□□□□ -0.4
BRF1-204ENST00000392557 CCDC82Q8N4S0 544 aa12.53□□□□□ -0.4
BRF1-204ENST00000392557 LINC00116Q8NCU8 138 aa12.53□□□□□ -0.4
BRF1-204ENST00000392557 SMARCC1Q92922 1105 aaPredicted RBP12.53□□□□□ -0.4
BRF1-204ENST00000392557 DNAI1Q9UI46 699 aa12.53□□□□□ -0.4
BRF1-204ENST00000392557 ZNF652Q9Y2D9 606 aa12.53□□□□□ -0.4
BRF1-204ENST00000392557 KLF18A0A0U1RQI7 1052 aa12.53□□□□□ -0.4
BRF1-204ENST00000392557 PFKFB2O60825 505 aa12.53□□□□□ -0.4
BRF1-204ENST00000392557 URI1O94763 535 aaPredicted RBP12.53□□□□□ -0.4
BRF1-204ENST00000392557 ATP2B1P20020 1258 aa12.53□□□□□ -0.4
BRF1-204ENST00000392557 MAGEB6Q8N7X4 407 aa12.53□□□□□ -0.4
BRF1-204ENST00000392557 LPIN2Q92539 896 aa12.53□□□□□ -0.4
BRF1-204ENST00000392557 RCOR1Q9UKL0 485 aa12.53□□□□□ -0.4
BRF1-204ENST00000392557 RFX7Q2KHR2 1363 aa12.53□□□□□ -0.4
BRF1-204ENST00000392557 GSDMDP57764 484 aa12.53□□□□□ -0.4
BRF1-204ENST00000392557 ERFEQ4G0M1 354 aa12.53□□□□□ -0.4
BRF1-204ENST00000392557 SRP68Q9UHB9 627 aaKnown RBP12.53□□□□□ -0.4
BRF1-204ENST00000392557 USP21Q9UK80 565 aa12.53□□□□□ -0.4
BRF1-204ENST00000392557 DENND2AQ9ULE3 1009 aa12.53□□□□□ -0.4
BRF1-204ENST00000392557 CLIC4Q9Y696 253 aa12.53□□□□□ -0.4
BRF1-204ENST00000392557 WTIPA6NIX2 430 aaPredicted RBP12.52□□□□□ -0.4
BRF1-204ENST00000392557 MAPK8IP2Q13387 824 aaPredicted RBP12.52□□□□□ -0.4
BRF1-204ENST00000392557 GNPATO15228 680 aa12.52□□□□□ -0.41
BRF1-204ENST00000392557 SPTLC2O15270 562 aa12.52□□□□□ -0.41
BRF1-204ENST00000392557 TRDNQ13061 729 aa12.52□□□□□ -0.41
BRF1-204ENST00000392557 KMT5BQ4FZB7 885 aa12.52□□□□□ -0.41
BRF1-204ENST00000392557 NAA16Q6N069 864 aaPredicted RBP12.52□□□□□ -0.41
BRF1-204ENST00000392557 FBXO38Q6PIJ6 1188 aa12.52□□□□□ -0.41
BRF1-204ENST00000392557 VPS37DQ86XT2 251 aa12.52□□□□□ -0.41
BRF1-204ENST00000392557 MIGA1Q8NAN2 632 aa12.52□□□□□ -0.41
BRF1-204ENST00000392557 LRP2BPQ9P2M1 347 aa12.52□□□□□ -0.41
BRF1-204ENST00000392557 AHDC1Q5TGY3 1603 aaPredicted RBP12.52□□□□□ -0.41
BRF1-204ENST00000392557 POLR3GO15318 223 aaPredicted RBP12.51□□□□□ -0.41
BRF1-204ENST00000392557 PRC1O43663 620 aa12.51□□□□□ -0.41
BRF1-204ENST00000392557 RASGRF1Q13972 1273 aa12.51□□□□□ -0.41
BRF1-204ENST00000392557 SLC4A8Q2Y0W8 1093 aa12.51□□□□□ -0.41
BRF1-204ENST00000392557 PARP10Q53GL7 1025 aa12.51□□□□□ -0.41
BRF1-204ENST00000392557 RRP12Q5JTH9 1297 aaKnown RBP12.51□□□□□ -0.41
BRF1-204ENST00000392557 DHX40Q8IX18 779 aaKnown RBP12.51□□□□□ -0.41
BRF1-204ENST00000392557 SPATA5Q8NB90 893 aa12.51□□□□□ -0.41
BRF1-204ENST00000392557 PDE6AP16499 860 aa12.51□□□□□ -0.41
BRF1-204ENST00000392557 PDIA3P30101 505 aaKnown RBP12.51□□□□□ -0.41
BRF1-204ENST00000392557 NFXL1Q6ZNB6 911 aa12.51□□□□□ -0.41
BRF1-204ENST00000392557 VGLL2Q8N8G2 317 aa12.51□□□□□ -0.41
BRF1-204ENST00000392557 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.51□□□□□ -0.41
BRF1-204ENST00000392557 UBXN4Q92575 508 aa12.51□□□□□ -0.41
BRF1-204ENST00000392557 LLPHQ9BRT6 129 aaKnown RBP12.51□□□□□ -0.41
BRF1-204ENST00000392557 INCENPQ9NQS7 918 aa12.51□□□□□ -0.41
BRF1-204ENST00000392557 MROH5Q6ZUA9 1318 aa12.51□□□□□ -0.41
BRF1-204ENST00000392557 CHRNDQ07001 517 aa12.51□□□□□ -0.41
BRF1-204ENST00000392557 GOLGA8FQ08AF8 430 aa12.51□□□□□ -0.41
BRF1-204ENST00000392557 GOLGA8DPQ0D2H9 430 aa12.51□□□□□ -0.41
BRF1-204ENST00000392557 TTF1Q15361 905 aaPredicted RBP12.51□□□□□ -0.41
BRF1-204ENST00000392557 ERO1AQ96HE7 468 aa12.51□□□□□ -0.41
BRF1-204ENST00000392557 ST7Q9NRC1 585 aa12.51□□□□□ -0.41
BRF1-204ENST00000392557 DDX41Q9UJV9 622 aaKnown RBP12.51□□□□□ -0.41
BRF1-204ENST00000392557 JCADQ9P266 1359 aa12.51□□□□□ -0.41
BRF1-204ENST00000392557 LRP6O75581 1613 aa12.51□□□□□ -0.41
BRF1-204ENST00000392557 DHX16O60231 1041 aaKnown RBP12.5□□□□□ -0.41
BRF1-204ENST00000392557 CTDNEP1O95476 244 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms