RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 EXOC6BQ9Y2D4 811 aa14.02□□□□□ -0.17
IGHV4-28-201ENST00000390612 CDK5RAP2Q96SN8 1893 aa14.01□□□□□ -0.17
IGHV4-28-201ENST00000390612 RPAP1Q9BWH6 1393 aaPredicted RBP14.01□□□□□ -0.17
IGHV4-28-201ENST00000390612 PPP1R12BO60237 982 aaPredicted RBP14.01□□□□□ -0.17
IGHV4-28-201ENST00000390612 TNNI2P48788 182 aa14.01□□□□□ -0.17
IGHV4-28-201ENST00000390612 PRKG1Q13976 671 aa14.01□□□□□ -0.17
IGHV4-28-201ENST00000390612 TTLL12Q14166 644 aaPredicted RBP14.01□□□□□ -0.17
IGHV4-28-201ENST00000390612 GORABQ5T7V8 394 aa14.01□□□□□ -0.17
IGHV4-28-201ENST00000390612 ERC1Q8IUD2 1116 aa14.01□□□□□ -0.17
IGHV4-28-201ENST00000390612 REM2Q8IYK8 340 aaPredicted RBP14.01□□□□□ -0.17
IGHV4-28-201ENST00000390612 RFX7Q2KHR2 1363 aa14□□□□□ -0.17
IGHV4-28-201ENST00000390612 DOCK2Q92608 1830 aa14□□□□□ -0.17
IGHV4-28-201ENST00000390612 LBX1P52954 281 aa14□□□□□ -0.17
IGHV4-28-201ENST00000390612 MECOMQ03112 1051 aa14□□□□□ -0.17
IGHV4-28-201ENST00000390612 HSP90AB4PQ58FF6 505 aa14□□□□□ -0.17
IGHV4-28-201ENST00000390612 TBC1D9Q6ZT07 1266 aa14□□□□□ -0.17
IGHV4-28-201ENST00000390612 FAM151AQ8WW52 585 aa14□□□□□ -0.17
IGHV4-28-201ENST00000390612 TLR7Q9NYK1 1049 aaKnown RBP14□□□□□ -0.17
IGHV4-28-201ENST00000390612 FAM198AQ9UFP1 575 aa14□□□□□ -0.17
IGHV4-28-201ENST00000390612 ABCF2Q9UG63 623 aa14□□□□□ -0.17
IGHV4-28-201ENST00000390612 MAST2Q6P0Q8 1798 aa13.99□□□□□ -0.17
IGHV4-28-201ENST00000390612 GPR75-ASB3A0A0A6YYF3 556 aa13.99□□□□□ -0.17
IGHV4-28-201ENST00000390612 IGSF3O75054 1194 aa13.99□□□□□ -0.17
IGHV4-28-201ENST00000390612 HMMRO75330 724 aa13.99□□□□□ -0.17
IGHV4-28-201ENST00000390612 TM4SF4P48230 202 aa13.99□□□□□ -0.17
IGHV4-28-201ENST00000390612 NFIAQ12857 509 aa13.99□□□□□ -0.17
IGHV4-28-201ENST00000390612 CCDC158Q5M9N0 1113 aa13.99□□□□□ -0.17
IGHV4-28-201ENST00000390612 SPRYD7Q5W111 196 aa13.99□□□□□ -0.17
IGHV4-28-201ENST00000390612 ERICH6Q7L0X2 663 aa13.99□□□□□ -0.17
IGHV4-28-201ENST00000390612 RHPN1Q8TCX5 695 aa13.99□□□□□ -0.17
IGHV4-28-201ENST00000390612 NSUN4Q96CB9 384 aaKnown RBP13.99□□□□□ -0.17
IGHV4-28-201ENST00000390612 CLMNQ96JQ2 1002 aa13.99□□□□□ -0.17
IGHV4-28-201ENST00000390612 BEGAINQ9BUH8 593 aa13.99□□□□□ -0.17
IGHV4-28-201ENST00000390612 IDI2Q9BXS1 227 aa13.99□□□□□ -0.17
IGHV4-28-201ENST00000390612 CCDC8Q9H0W5 538 aaPredicted RBP13.99□□□□□ -0.17
IGHV4-28-201ENST00000390612 TMOD2Q9NZR1 351 aa13.99□□□□□ -0.17
IGHV4-28-201ENST00000390612 FOCADQ5VW36 1801 aa13.99□□□□□ -0.17
IGHV4-28-201ENST00000390612 MROH7-TTC4A0A0A0MT08 1334 aa13.98□□□□□ -0.17
IGHV4-28-201ENST00000390612 CYP2E1P05181 493 aaPredicted RBP13.98□□□□□ -0.17
IGHV4-28-201ENST00000390612 IREB2P48200 963 aaKnown RBP13.98□□□□□ -0.17
IGHV4-28-201ENST00000390612 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.98□□□□□ -0.17
IGHV4-28-201ENST00000390612 DZIP1Q86YF9 867 aaKnown RBP13.98□□□□□ -0.17
IGHV4-28-201ENST00000390612 SLF2Q8IX21 1173 aa13.98□□□□□ -0.17
IGHV4-28-201ENST00000390612 ANKRD13AQ8IZ07 590 aa13.98□□□□□ -0.17
IGHV4-28-201ENST00000390612 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.98□□□□□ -0.17
IGHV4-28-201ENST00000390612 SLC10A4Q96EP9 437 aa13.98□□□□□ -0.17
IGHV4-28-201ENST00000390612 USP40Q9NVE5 1235 aa13.98□□□□□ -0.17
IGHV4-28-201ENST00000390612 RNF186Q9NXI6 227 aa13.98□□□□□ -0.17
IGHV4-28-201ENST00000390612 SAGE1Q9NXZ1 904 aa13.98□□□□□ -0.17
IGHV4-28-201ENST00000390612 RAB11FIP3O75154 756 aa13.97□□□□□ -0.17
IGHV4-28-201ENST00000390612 WDHD1O75717 1129 aaPredicted RBP13.97□□□□□ -0.17
IGHV4-28-201ENST00000390612 RHBDL3P58872 404 aa13.97□□□□□ -0.17
IGHV4-28-201ENST00000390612 TTC39AQ5SRH9 613 aa13.97□□□□□ -0.17
IGHV4-28-201ENST00000390612 KIF1BPQ96EK5 621 aa13.97□□□□□ -0.17
IGHV4-28-201ENST00000390612 WNK4Q96J92 1243 aa13.97□□□□□ -0.17
IGHV4-28-201ENST00000390612 SNRKQ9NRH2 765 aa13.97□□□□□ -0.17
IGHV4-28-201ENST00000390612 ENTPD3O75355 529 aa13.96□□□□□ -0.17
IGHV4-28-201ENST00000390612 NPM3O75607 178 aaKnown RBP13.96□□□□□ -0.17
IGHV4-28-201ENST00000390612 MAP4K4O95819 1239 aaPredicted RBP13.96□□□□□ -0.17
IGHV4-28-201ENST00000390612 LDHCP07864 332 aa13.96□□□□□ -0.17
IGHV4-28-201ENST00000390612 ZBTB48P10074 688 aaPredicted RBP13.96□□□□□ -0.17
IGHV4-28-201ENST00000390612 GJA5P36382 358 aa13.96□□□□□ -0.17
IGHV4-28-201ENST00000390612 ZAP70P43403 619 aa13.96□□□□□ -0.17
IGHV4-28-201ENST00000390612 RRP1P56182 461 aaKnown RBP13.96□□□□□ -0.17
IGHV4-28-201ENST00000390612 MAP3K9P80192 1104 aa13.96□□□□□ -0.17
IGHV4-28-201ENST00000390612 MAP3K10Q02779 954 aa13.96□□□□□ -0.17
IGHV4-28-201ENST00000390612 ZFPM1Q8IX07 1006 aa13.96□□□□□ -0.17
IGHV4-28-201ENST00000390612 IL1RAPL2Q9NP60 686 aa13.96□□□□□ -0.17
IGHV4-28-201ENST00000390612 TSKSQ9UJT2 592 aa13.96□□□□□ -0.17
IGHV4-28-201ENST00000390612 ZNF112Q9UJU3 913 aa13.96□□□□□ -0.17
IGHV4-28-201ENST00000390612 ATRNL1Q5VV63 1379 aa13.96□□□□□ -0.18
IGHV4-28-201ENST00000390612 BTDP43251 543 aa13.95□□□□□ -0.18
IGHV4-28-201ENST00000390612 RGS3P49796 1198 aa13.95□□□□□ -0.18
IGHV4-28-201ENST00000390612 PPP4CP60510 307 aa13.95□□□□□ -0.18
IGHV4-28-201ENST00000390612 GSTO1P78417 241 aa13.95□□□□□ -0.18
IGHV4-28-201ENST00000390612 IFFO2Q5TF58 517 aa13.95□□□□□ -0.18
IGHV4-28-201ENST00000390612 SH3BP5LQ7L8J4 393 aa13.95□□□□□ -0.18
IGHV4-28-201ENST00000390612 AACSQ86V21 672 aa13.95□□□□□ -0.18
IGHV4-28-201ENST00000390612 HOOK2Q96ED9 719 aa13.95□□□□□ -0.18
IGHV4-28-201ENST00000390612 PIH1D3Q9NQM4 214 aaKnown RBP13.95□□□□□ -0.18
IGHV4-28-201ENST00000390612 LRP2BPQ9P2M1 347 aa13.95□□□□□ -0.18
IGHV4-28-201ENST00000390612 TESPA1A2RU30 521 aaPredicted RBP13.94□□□□□ -0.18
IGHV4-28-201ENST00000390612 TRPA1O75762 1119 aa13.94□□□□□ -0.18
IGHV4-28-201ENST00000390612 INHBEP58166 350 aa13.94□□□□□ -0.18
IGHV4-28-201ENST00000390612 TCP10Q12799 353 aa13.94□□□□□ -0.18
IGHV4-28-201ENST00000390612 VGLL4Q14135 290 aa13.94□□□□□ -0.18
IGHV4-28-201ENST00000390612 CLASRPQ8N2M8 674 aaKnown RBP13.94□□□□□ -0.18
IGHV4-28-201ENST00000390612 YTHDC1Q96MU7 727 aaKnown RBP13.94□□□□□ -0.18
IGHV4-28-201ENST00000390612 CFHR5Q9BXR6 569 aa13.94□□□□□ -0.18
IGHV4-28-201ENST00000390612 DCTPP1Q9H773 170 aa13.94□□□□□ -0.18
IGHV4-28-201ENST00000390612 DDX4Q9NQI0 724 aaKnown RBP13.94□□□□□ -0.18
IGHV4-28-201ENST00000390612 RAI14Q9P0K7 980 aa13.94□□□□□ -0.18
IGHV4-28-201ENST00000390612 MYH7P12883 1935 aa13.94□□□□□ -0.18
IGHV4-28-201ENST00000390612 SIPA1L1O43166 1804 aa13.93□□□□□ -0.18
IGHV4-28-201ENST00000390612 PHIPQ8WWQ0 1821 aa13.93□□□□□ -0.18
IGHV4-28-201ENST00000390612 MANSC4A6NHS7 340 aaPredicted RBP13.93□□□□□ -0.18
IGHV4-28-201ENST00000390612 SREBF2Q12772 1141 aa13.93□□□□□ -0.18
IGHV4-28-201ENST00000390612 MKRN3Q13064 507 aaKnown RBP13.93□□□□□ -0.18
IGHV4-28-201ENST00000390612 DCAF15Q66K64 600 aa13.93□□□□□ -0.18
IGHV4-28-201ENST00000390612 TNS4Q8IZW8 715 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms