RNA–Protein interactions for RNA: ENST00000390400.2

TRBV28-201, Transcript of T cell receptor beta variable 28, humanhuman

APPRIS P1 BASIC

Gene TRBV28, Length 364 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV28-201ENST00000390400 FSD2A1L4K1 749 aa9.22□□□□□ -0.93
TRBV28-201ENST00000390400 APBA3O96018 575 aa9.22□□□□□ -0.93
TRBV28-201ENST00000390400 CT47B1P0C2W7 299 aaPredicted RBP9.22□□□□□ -0.93
TRBV28-201ENST00000390400 SH3PXD2AQ5TCZ1 1133 aa9.22□□□□□ -0.93
TRBV28-201ENST00000390400 TSPYL6Q8N831 410 aa9.22□□□□□ -0.93
TRBV28-201ENST00000390400 EXOC6Q8TAG9 804 aa9.22□□□□□ -0.93
TRBV28-201ENST00000390400 CHMP4AQ9BY43 222 aa9.22□□□□□ -0.93
TRBV28-201ENST00000390400 PDCL3Q9H2J4 239 aa9.22□□□□□ -0.93
TRBV28-201ENST00000390400 HRH3Q9Y5N1 445 aa9.22□□□□□ -0.93
TRBV28-201ENST00000390400 ZNF831Q5JPB2 1677 aa9.22□□□□□ -0.93
TRBV28-201ENST00000390400 RGPD3A6NKT7 1758 aaPredicted RBP9.22□□□□□ -0.93
TRBV28-201ENST00000390400 RGPD4Q7Z3J3 1758 aa9.22□□□□□ -0.93
TRBV28-201ENST00000390400 CACNA1FO60840 1977 aa9.21□□□□□ -0.93
TRBV28-201ENST00000390400 VAMP4O75379 141 aa9.21□□□□□ -0.94
TRBV28-201ENST00000390400 ADH1CP00326 375 aa9.21□□□□□ -0.94
TRBV28-201ENST00000390400 MRE11P49959 708 aa9.21□□□□□ -0.94
TRBV28-201ENST00000390400 MTFR1Q15390 333 aa9.21□□□□□ -0.94
TRBV28-201ENST00000390400 COX20Q5RI15 118 aa9.21□□□□□ -0.94
TRBV28-201ENST00000390400 SLC9A9Q8IVB4 645 aa9.21□□□□□ -0.94
TRBV28-201ENST00000390400 DNAJC10Q8IXB1 793 aa9.21□□□□□ -0.94
TRBV28-201ENST00000390400 CCDC116Q8IYX3 515 aa9.21□□□□□ -0.94
TRBV28-201ENST00000390400 MPNDQ8N594 471 aa9.21□□□□□ -0.94
TRBV28-201ENST00000390400 MRGPRX2Q96LB1 330 aa9.21□□□□□ -0.94
TRBV28-201ENST00000390400 TEX13AQ9BXU3 409 aaPredicted RBP9.21□□□□□ -0.94
TRBV28-201ENST00000390400 CCDC87Q9NVE4 849 aa9.21□□□□□ -0.94
TRBV28-201ENST00000390400 SCHIP1Q9P0W5 487 aaPredicted RBP9.21□□□□□ -0.94
TRBV28-201ENST00000390400 CCNL1Q9UK58 526 aaPredicted RBP9.21□□□□□ -0.94
TRBV28-201ENST00000390400 LRFN2Q9ULH4 789 aa9.21□□□□□ -0.94
TRBV28-201ENST00000390400 CICQ96RK0 1608 aaPredicted RBP9.2□□□□□ -0.94
TRBV28-201ENST00000390400 TJP1Q07157 1748 aa9.2□□□□□ -0.94
TRBV28-201ENST00000390400 PRAMEF22A3QJZ6 481 aa9.2□□□□□ -0.94
TRBV28-201ENST00000390400 ZBTB39O15060 712 aa9.2□□□□□ -0.94
TRBV28-201ENST00000390400 PLSCR1O15162 318 aa9.2□□□□□ -0.94
TRBV28-201ENST00000390400 STARD3NLO95772 234 aa9.2□□□□□ -0.94
TRBV28-201ENST00000390400 IGHA2P01877 340 aa9.2□□□□□ -0.94
TRBV28-201ENST00000390400 EIF2S2P20042 333 aaKnown RBP9.2□□□□□ -0.94
TRBV28-201ENST00000390400 SLC27A3Q5K4L6 730 aa9.2□□□□□ -0.94
TRBV28-201ENST00000390400 CCDC30Q5VVM6 783 aa9.2□□□□□ -0.94
TRBV28-201ENST00000390400 TMC7Q7Z402 723 aa9.2□□□□□ -0.94
TRBV28-201ENST00000390400 C2orf49Q9BVC5 232 aaPredicted RBP9.2□□□□□ -0.94
TRBV28-201ENST00000390400 ARHGEF10LQ9HCE6 1279 aa9.2□□□□□ -0.94
TRBV28-201ENST00000390400 IQSEC3Q9UPP2 1182 aaPredicted RBP9.2□□□□□ -0.94
TRBV28-201ENST00000390400 A6NJY4 79 aa9.19□□□□□ -0.94
TRBV28-201ENST00000390400 BACH1O14867 736 aa9.19□□□□□ -0.94
TRBV28-201ENST00000390400 PPP1R12BO60237 982 aaPredicted RBP9.19□□□□□ -0.94
TRBV28-201ENST00000390400 HMGB2P26583 209 aaKnown RBP9.19□□□□□ -0.94
TRBV28-201ENST00000390400 BAG6P46379 1132 aa9.19□□□□□ -0.94
TRBV28-201ENST00000390400 SMTNP53814 917 aa9.19□□□□□ -0.94
TRBV28-201ENST00000390400 C8orf34Q49A92 452 aa9.19□□□□□ -0.94
TRBV28-201ENST00000390400 ZNF295-AS1Q8N0V1 137 aa9.19□□□□□ -0.94
TRBV28-201ENST00000390400 XAGE2Q96GT9 111 aa9.19□□□□□ -0.94
TRBV28-201ENST00000390400 STK31Q9BXU1 1019 aa9.19□□□□□ -0.94
TRBV28-201ENST00000390400 RNF19AQ9NV58 838 aa9.19□□□□□ -0.94
TRBV28-201ENST00000390400 USP16Q9Y5T5 823 aa9.19□□□□□ -0.94
TRBV28-201ENST00000390400 TAF1LQ8IZX4 1826 aa9.19□□□□□ -0.94
TRBV28-201ENST00000390400 GOLGA6L3A6NEY3 463 aa9.18□□□□□ -0.94
TRBV28-201ENST00000390400 FZD6O60353 706 aa9.18□□□□□ -0.94
TRBV28-201ENST00000390400 GNRH1P01148 92 aa9.18□□□□□ -0.94
TRBV28-201ENST00000390400 CYP19A1P11511 503 aaPredicted RBP9.18□□□□□ -0.94
TRBV28-201ENST00000390400 NCLP19338 710 aaKnown RBP9.18□□□□□ -0.94
TRBV28-201ENST00000390400 COL5A3P25940 1745 aaPredicted RBP9.18□□□□□ -0.94
TRBV28-201ENST00000390400 RARSP54136 660 aaKnown RBP9.18□□□□□ -0.94
TRBV28-201ENST00000390400 KCNQ4P56696 695 aa9.18□□□□□ -0.94
TRBV28-201ENST00000390400 DHX9Q08211 1270 aaKnown RBP9.18□□□□□ -0.94
TRBV28-201ENST00000390400 CBLBQ13191 982 aa9.18□□□□□ -0.94
TRBV28-201ENST00000390400 ITPK1Q13572 414 aa9.18□□□□□ -0.94
TRBV28-201ENST00000390400 ERBB4Q15303 1308 aa9.18□□□□□ -0.94
TRBV28-201ENST00000390400 TXNRD1Q16881 649 aa9.18□□□□□ -0.94
TRBV28-201ENST00000390400 ALDH1L2Q3SY69 923 aa9.18□□□□□ -0.94
TRBV28-201ENST00000390400 ZDHHC1Q8WTX9 485 aa9.18□□□□□ -0.94
TRBV28-201ENST00000390400 UPF2Q9HAU5 1272 aaKnown RBP9.18□□□□□ -0.94
TRBV28-201ENST00000390400 SMC4Q9NTJ3 1288 aa9.18□□□□□ -0.94
TRBV28-201ENST00000390400 HCSTQ9UBK5 93 aa9.18□□□□□ -0.94
TRBV28-201ENST00000390400 MYH14Q7Z406 1995 aaKnown RBP9.17□□□□□ -0.94
TRBV28-201ENST00000390400 IBTKQ9P2D0 1353 aaPredicted RBP9.17□□□□□ -0.94
TRBV28-201ENST00000390400 CNTNAP4Q9C0A0 1308 aa9.17□□□□□ -0.94
TRBV28-201ENST00000390400 CD2BP2O95400 341 aaKnown RBP9.17□□□□□ -0.94
TRBV28-201ENST00000390400 P4HBP07237 508 aaKnown RBP9.17□□□□□ -0.94
TRBV28-201ENST00000390400 CRKLP46109 303 aaKnown RBP9.17□□□□□ -0.94
TRBV28-201ENST00000390400 HS1BP3Q53T59 392 aa9.17□□□□□ -0.94
TRBV28-201ENST00000390400 C16orf46Q6P387 395 aa9.17□□□□□ -0.94
TRBV28-201ENST00000390400 ILDR2Q71H61 639 aa9.17□□□□□ -0.94
TRBV28-201ENST00000390400 RGL4Q8IZJ4 473 aa9.17□□□□□ -0.94
TRBV28-201ENST00000390400 LINC00116Q8NCU8 138 aa9.17□□□□□ -0.94
TRBV28-201ENST00000390400 SSH1Q8WYL5 1049 aa9.17□□□□□ -0.94
TRBV28-201ENST00000390400 CAMKK2Q96RR4 588 aa9.17□□□□□ -0.94
TRBV28-201ENST00000390400 CHPF2Q9P2E5 772 aa9.17□□□□□ -0.94
TRBV28-201ENST00000390400 DBF4Q9UBU7 674 aaPredicted RBP9.17□□□□□ -0.94
TRBV28-201ENST00000390400 WNT7AO00755 349 aa9.16□□□□□ -0.94
TRBV28-201ENST00000390400 RECKO95980 971 aa9.16□□□□□ -0.94
TRBV28-201ENST00000390400 A1BGP04217 495 aa9.16□□□□□ -0.94
TRBV28-201ENST00000390400 GGCXP38435 758 aa9.16□□□□□ -0.94
TRBV28-201ENST00000390400 NR5A1Q13285 461 aa9.16□□□□□ -0.94
TRBV28-201ENST00000390400 PROSER3Q2NL68 480 aa9.16□□□□□ -0.94
TRBV28-201ENST00000390400 CYP2U1Q7Z449 544 aa9.16□□□□□ -0.94
TRBV28-201ENST00000390400 DEFB132Q7Z7B7 95 aa9.16□□□□□ -0.94
TRBV28-201ENST00000390400 RBCK1Q9BYM8 510 aa9.16□□□□□ -0.94
TRBV28-201ENST00000390400 DDX21Q9NR30 783 aaKnown RBP eCLIP9.16□□□□□ -0.94
TRBV28-201ENST00000390400 LRRC4BQ9NT99 713 aa9.16□□□□□ -0.94
TRBV28-201ENST00000390400 HYPKQ9NX55 129 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms