RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 AKNAD1Q5T1N1 836 aa21.34■■□□□ 1.01
ACTN4-202ENST00000390009 TMEM87BQ96K49 555 aa21.34■■□□□ 1.01
ACTN4-202ENST00000390009 CCDC88AQ3V6T2 1871 aa21.34■■□□□ 1.01
ACTN4-202ENST00000390009 FOSBP53539 338 aa21.34■■□□□ 1.01
ACTN4-202ENST00000390009 CCDC183Q5T5S1 534 aa21.34■■□□□ 1.01
ACTN4-202ENST00000390009 RAB11FIP4Q86YS3 637 aa21.34■■□□□ 1.01
ACTN4-202ENST00000390009 RBSNQ9H1K0 784 aa21.34■■□□□ 1.01
ACTN4-202ENST00000390009 CNNM2Q9H8M5 875 aa21.34■■□□□ 1.01
ACTN4-202ENST00000390009 TACC3Q9Y6A5 838 aa21.34■■□□□ 1.01
ACTN4-202ENST00000390009 RIOK1Q9BRS2 568 aaKnown RBP21.33■■□□□ 1.01
ACTN4-202ENST00000390009 TFIP11Q9UBB9 837 aaKnown RBP21.33■■□□□ 1.01
ACTN4-202ENST00000390009 BAZ2AQ9UIF9 1905 aaKnown RBP21.32■■□□□ 1
ACTN4-202ENST00000390009 MFSD6Q6ZSS7 791 aa21.32■■□□□ 1
ACTN4-202ENST00000390009 IGDCC4Q8TDY8 1250 aa21.32■■□□□ 1
ACTN4-202ENST00000390009 ZNF384Q8TF68 577 aa21.32■■□□□ 1
ACTN4-202ENST00000390009 SDR42E1Q8WUS8 393 aa21.32■■□□□ 1
ACTN4-202ENST00000390009 STAG1Q8WVM7 1258 aa21.32■■□□□ 1
ACTN4-202ENST00000390009 SPATA32Q96LK8 384 aa21.32■■□□□ 1
ACTN4-202ENST00000390009 IRS2Q9Y4H2 1338 aa21.32■■□□□ 1
ACTN4-202ENST00000390009 CPLX1O14810 134 aa21.32■■□□□ 1
ACTN4-202ENST00000390009 KDM4AO75164 1064 aa21.32■■□□□ 1
ACTN4-202ENST00000390009 TXNRD3Q86VQ6 643 aa21.32■■□□□ 1
ACTN4-202ENST00000390009 KRT23Q9C075 422 aa21.32■■□□□ 1
ACTN4-202ENST00000390009 ZSWIM5Q9P217 1185 aa21.32■■□□□ 1
ACTN4-202ENST00000390009 MAST2Q6P0Q8 1798 aa21.31■■□□□ 1
ACTN4-202ENST00000390009 ANKIB1Q9P2G1 1089 aa21.31■■□□□ 1
ACTN4-202ENST00000390009 SERPINB2P05120 415 aa21.31■■□□□ 1
ACTN4-202ENST00000390009 APOA5Q6Q788 366 aa21.31■■□□□ 1
ACTN4-202ENST00000390009 LEO1Q8WVC0 666 aaPredicted RBP21.31■■□□□ 1
ACTN4-202ENST00000390009 NSUN4Q96CB9 384 aaKnown RBP21.31■■□□□ 1
ACTN4-202ENST00000390009 LY9Q9HBG7 655 aa21.31■■□□□ 1
ACTN4-202ENST00000390009 SENP2Q9HC62 589 aa21.31■■□□□ 1
ACTN4-202ENST00000390009 ST5P78524 1137 aa21.3■■□□□ 1
ACTN4-202ENST00000390009 TMEM67Q5HYA8 995 aa21.3■■□□□ 1
ACTN4-202ENST00000390009 SLC51AQ86UW1 340 aa21.3■■□□□ 1
ACTN4-202ENST00000390009 METAP2P50579 478 aaKnown RBP eCLIP21.29■■□□□ 11e-6■■□□□ 14
ACTN4-202ENST00000390009 DYNLL1P63167 89 aaKnown RBP21.29■■□□□ 1
ACTN4-202ENST00000390009 GUCY1B3Q02153 619 aa21.29■■□□□ 1
ACTN4-202ENST00000390009 PPARAQ07869 468 aa21.29■■□□□ 1
ACTN4-202ENST00000390009 CHAF1AQ13111 956 aaPredicted RBP21.29■■□□□ 1
ACTN4-202ENST00000390009 SGMS1Q86VZ5 419 aa21.29■■□□□ 1
ACTN4-202ENST00000390009 RPGRQ92834 1020 aaKnown RBP21.29■■□□□ 1
ACTN4-202ENST00000390009 ORC3Q9UBD5 711 aaPredicted RBP21.29■■□□□ 1
ACTN4-202ENST00000390009 LEMD3Q9Y2U8 911 aa21.29■■□□□ 1
ACTN4-202ENST00000390009 LIFRP42702 1097 aa21.29■■□□□ 1
ACTN4-202ENST00000390009 MECOMQ03112 1051 aa21.29■■□□□ 1
ACTN4-202ENST00000390009 TXNRD1Q16881 649 aa21.29■■□□□ 1
ACTN4-202ENST00000390009 CRY2Q49AN0 593 aa21.29■■□□□ 1
ACTN4-202ENST00000390009 PROM2Q8N271 834 aa21.29■■□□□ 1
ACTN4-202ENST00000390009 IFIT3O14879 490 aaKnown RBP21.28■■□□□ 1
ACTN4-202ENST00000390009 ZBTB22O15209 634 aa21.28■■□□□ 1
ACTN4-202ENST00000390009 RRP12Q5JTH9 1297 aaKnown RBP21.28■■□□□ 1
ACTN4-202ENST00000390009 NFXL1Q6ZNB6 911 aa21.28■■□□□ 1
ACTN4-202ENST00000390009 TSPY26PQ9H489 355 aa21.28■■□□□ 1
ACTN4-202ENST00000390009 RNF41Q9H4P4 317 aaPredicted RBP21.28■■□□□ 1
ACTN4-202ENST00000390009 TOMM22Q9NS69 142 aa21.28■■□□□ 1
ACTN4-202ENST00000390009 CFAP45Q9UL16 551 aa21.28■■□□□ 1
ACTN4-202ENST00000390009 XDHP47989 1333 aa21.28■■□□□ 1
ACTN4-202ENST00000390009 LETM1O95202 739 aaPredicted RBP21.28■■□□□ 1
ACTN4-202ENST00000390009 MINDY4BA8MYZ0 360 aa21.27■■□□□ 1
ACTN4-202ENST00000390009 ZBTB43O43298 467 aa21.27■■□□□ 1
ACTN4-202ENST00000390009 RXRAP19793 462 aa21.27■■□□□ 1
ACTN4-202ENST00000390009 PRDX5P30044 214 aa21.27■■□□□ 1
ACTN4-202ENST00000390009 MICU3Q86XE3 530 aa21.27■■□□□ 1
ACTN4-202ENST00000390009 STK11IPQ8N1F8 1099 aa21.27■■□□□ 1
ACTN4-202ENST00000390009 ANAPC4Q9UJX5 808 aa21.27■■□□□ 1
ACTN4-202ENST00000390009 ECM29Q5VYK3 1845 aa21.26■□□□□ 0.99
ACTN4-202ENST00000390009 KIAA1551Q9HCM1 1747 aa21.26■□□□□ 0.99
ACTN4-202ENST00000390009 ADD1P35611 737 aaKnown RBP21.26■□□□□ 0.99
ACTN4-202ENST00000390009 ANP32BQ92688 251 aaKnown RBP21.26■□□□□ 0.99
ACTN4-202ENST00000390009 C8orf76Q96K31 380 aa21.26■□□□□ 0.99
ACTN4-202ENST00000390009 BRIP1Q9BX63 1249 aa21.26■□□□□ 0.99
ACTN4-202ENST00000390009 MYH2Q9UKX2 1941 aa21.26■□□□□ 0.99
ACTN4-202ENST00000390009 GOLGA6L4A6NEF3 574 aa21.26■□□□□ 0.99
ACTN4-202ENST00000390009 DDR1Q08345 913 aa21.26■□□□□ 0.99
ACTN4-202ENST00000390009 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.26■□□□□ 0.99
ACTN4-202ENST00000390009 CDC27P30260 824 aa21.25■□□□□ 0.99
ACTN4-202ENST00000390009 JAG2Q9Y219 1238 aa21.25■□□□□ 0.99
ACTN4-202ENST00000390009 SLC12A7Q9Y666 1083 aa21.25■□□□□ 0.99
ACTN4-202ENST00000390009 CCDC69A6NI79 296 aa21.25■□□□□ 0.99
ACTN4-202ENST00000390009 CDKL5O76039 1030 aa21.25■□□□□ 0.99
ACTN4-202ENST00000390009 RBM6P78332 1123 aaKnown RBP21.25■□□□□ 0.99
ACTN4-202ENST00000390009 SART3Q15020 963 aaKnown RBP21.25■□□□□ 0.99
ACTN4-202ENST00000390009 FBXO18Q8NFZ0 1043 aa21.25■□□□□ 0.99
ACTN4-202ENST00000390009 GOLGA8AA7E2F4 631 aa21.24■□□□□ 0.99
ACTN4-202ENST00000390009 POLRMTO00411 1230 aaKnown RBP21.24■□□□□ 0.99
ACTN4-202ENST00000390009 LIG1P18858 919 aa21.24■□□□□ 0.99
ACTN4-202ENST00000390009 HMGB2P26583 209 aaKnown RBP21.24■□□□□ 0.99
ACTN4-202ENST00000390009 CCDC173Q0VFZ6 552 aa21.24■□□□□ 0.99
ACTN4-202ENST00000390009 ATL3Q6DD88 541 aa21.24■□□□□ 0.99
ACTN4-202ENST00000390009 OTUD7BQ6GQQ9 843 aa21.24■□□□□ 0.99
ACTN4-202ENST00000390009 CPLX2Q6PUV4 134 aaKnown RBP21.24■□□□□ 0.99
ACTN4-202ENST00000390009 ILDR1Q86SU0 546 aaPredicted RBP21.24■□□□□ 0.99
ACTN4-202ENST00000390009 CCDC144CPQ8IYA2 1237 aa21.24■□□□□ 0.99
ACTN4-202ENST00000390009 RBM17Q96I25 401 aaKnown RBP21.24■□□□□ 0.99
ACTN4-202ENST00000390009 PGBD1Q96JS3 809 aa21.24■□□□□ 0.99
ACTN4-202ENST00000390009 ZKSCAN3Q9BRR0 538 aa21.24■□□□□ 0.99
ACTN4-202ENST00000390009 MTA3Q9BTC8 594 aa21.24■□□□□ 0.99
ACTN4-202ENST00000390009 MYL10Q9BUA6 226 aa21.24■□□□□ 0.99
ACTN4-202ENST00000390009 AATFQ9NY61 560 aaKnown RBP eCLIP21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms