RNA–Protein interactions for RNA: ENST00000389212.7

RAPGEF3-201, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 3,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-201ENST00000389212 PDE6AP16499 860 aa13.56□□□□□ -0.24
RAPGEF3-201ENST00000389212 CTDSPL2Q05D32 466 aa13.56□□□□□ -0.24
RAPGEF3-201ENST00000389212 VGLL2Q8N8G2 317 aa13.56□□□□□ -0.24
RAPGEF3-201ENST00000389212 ACSBG1Q96GR2 724 aa13.56□□□□□ -0.24
RAPGEF3-201ENST00000389212 PLEKHG2Q9H7P9 1386 aa13.56□□□□□ -0.24
RAPGEF3-201ENST00000389212 MYO5AQ9Y4I1 1855 aaKnown RBP13.56□□□□□ -0.24
RAPGEF3-201ENST00000389212 NEDD4P46934 1319 aa13.56□□□□□ -0.24
RAPGEF3-201ENST00000389212 PDE8BO95263 885 aa13.56□□□□□ -0.24
RAPGEF3-201ENST00000389212 CDC27P30260 824 aa13.56□□□□□ -0.24
RAPGEF3-201ENST00000389212 MYSM1Q5VVJ2 828 aa13.56□□□□□ -0.24
RAPGEF3-201ENST00000389212 DHX40Q8IX18 779 aaKnown RBP13.56□□□□□ -0.24
RAPGEF3-201ENST00000389212 FMR1NBQ8N0W7 255 aaPredicted RBP13.56□□□□□ -0.24
RAPGEF3-201ENST00000389212 PAPPAQ13219 1627 aa13.56□□□□□ -0.24
RAPGEF3-201ENST00000389212 RRP12Q5JTH9 1297 aaKnown RBP13.56□□□□□ -0.24
RAPGEF3-201ENST00000389212 C10orf67Q8IYJ2 551 aa13.56□□□□□ -0.24
RAPGEF3-201ENST00000389212 CCDC82Q8N4S0 544 aa13.56□□□□□ -0.24
RAPGEF3-201ENST00000389212 ZKSCAN3Q9BRR0 538 aa13.56□□□□□ -0.24
RAPGEF3-201ENST00000389212 TEX13AQ9BXU3 409 aaPredicted RBP13.56□□□□□ -0.24
RAPGEF3-201ENST00000389212 RTEL1Q9NZ71 1219 aa13.56□□□□□ -0.24
RAPGEF3-201ENST00000389212 OGFRQ9NZT2 677 aa13.56□□□□□ -0.24
RAPGEF3-201ENST00000389212 SPTLC2O15270 562 aa13.55□□□□□ -0.24
RAPGEF3-201ENST00000389212 METAP2P50579 478 aaKnown RBP eCLIP13.55□□□□□ -0.24
RAPGEF3-201ENST00000389212 DPCR1Q3MIW9 517 aa13.55□□□□□ -0.24
RAPGEF3-201ENST00000389212 NFXL1Q6ZNB6 911 aa13.55□□□□□ -0.24
RAPGEF3-201ENST00000389212 PRKAB2O43741 272 aa13.55□□□□□ -0.24
RAPGEF3-201ENST00000389212 TPM3P06753 285 aa13.55□□□□□ -0.24
RAPGEF3-201ENST00000389212 EVCP57679 992 aa13.55□□□□□ -0.24
RAPGEF3-201ENST00000389212 SYNE3Q6ZMZ3 975 aa13.55□□□□□ -0.24
RAPGEF3-201ENST00000389212 MAGEB6Q8N7X4 407 aa13.55□□□□□ -0.24
RAPGEF3-201ENST00000389212 AIDAQ96BJ3 306 aa13.55□□□□□ -0.24
RAPGEF3-201ENST00000389212 ALG1Q9BT22 464 aa13.55□□□□□ -0.24
RAPGEF3-201ENST00000389212 ARMT1Q9H993 441 aa13.55□□□□□ -0.24
RAPGEF3-201ENST00000389212 KIF23Q02241 960 aaPredicted RBP13.54□□□□□ -0.24
RAPGEF3-201ENST00000389212 ZNF592Q92610 1267 aa13.54□□□□□ -0.24
RAPGEF3-201ENST00000389212 DHX16O60231 1041 aaKnown RBP13.54□□□□□ -0.24
RAPGEF3-201ENST00000389212 ADALQ6DHV7 355 aa13.54□□□□□ -0.24
RAPGEF3-201ENST00000389212 CMTR1Q8N1G2 835 aaKnown RBP13.54□□□□□ -0.24
RAPGEF3-201ENST00000389212 FBXO3Q9UK99 471 aa13.54□□□□□ -0.24
RAPGEF3-201ENST00000389212 ANGEL1Q9UNK9 670 aaKnown RBP13.54□□□□□ -0.24
RAPGEF3-201ENST00000389212 TACC3Q9Y6A5 838 aa13.54□□□□□ -0.24
RAPGEF3-201ENST00000389212 USP27XA6NNY8 438 aa13.54□□□□□ -0.24
RAPGEF3-201ENST00000389212 CTAGE5O15320 804 aa13.54□□□□□ -0.24
RAPGEF3-201ENST00000389212 PDE8AO60658 829 aa13.54□□□□□ -0.24
RAPGEF3-201ENST00000389212 WDHD1O75717 1129 aaPredicted RBP13.54□□□□□ -0.24
RAPGEF3-201ENST00000389212 MBD4O95243 580 aa13.54□□□□□ -0.24
RAPGEF3-201ENST00000389212 ANO10Q9NW15 660 aa13.54□□□□□ -0.24
RAPGEF3-201ENST00000389212 MROH7-TTC4A0A0A0MT08 1334 aa13.54□□□□□ -0.24
RAPGEF3-201ENST00000389212 GNL2Q13823 731 aaKnown RBP13.53□□□□□ -0.24
RAPGEF3-201ENST00000389212 RASGRF1Q13972 1273 aa13.53□□□□□ -0.24
RAPGEF3-201ENST00000389212 SUSD4Q5VX71 490 aa13.53□□□□□ -0.24
RAPGEF3-201ENST00000389212 MIGA1Q8NAN2 632 aa13.53□□□□□ -0.24
RAPGEF3-201ENST00000389212 EPB41L4AQ9HCS5 686 aaPredicted RBP13.53□□□□□ -0.24
RAPGEF3-201ENST00000389212 MYH15Q9Y2K3 1946 aa13.53□□□□□ -0.24
RAPGEF3-201ENST00000389212 CDHR2Q9BYE9 1310 aa13.53□□□□□ -0.24
RAPGEF3-201ENST00000389212 WTIPA6NIX2 430 aaPredicted RBP13.53□□□□□ -0.24
RAPGEF3-201ENST00000389212 ANO1Q5XXA6 986 aa13.53□□□□□ -0.24
RAPGEF3-201ENST00000389212 APOA5Q6Q788 366 aa13.53□□□□□ -0.24
RAPGEF3-201ENST00000389212 CEP57L1Q8IYX8 460 aa13.53□□□□□ -0.24
RAPGEF3-201ENST00000389212 TRMT1Q9NXH9 659 aaKnown RBP13.53□□□□□ -0.24
RAPGEF3-201ENST00000389212 AKAP11Q9UKA4 1901 aa13.53□□□□□ -0.24
RAPGEF3-201ENST00000389212 SMIM22K7EJ46 135 aa13.52□□□□□ -0.24
RAPGEF3-201ENST00000389212 SH2B2O14492 632 aaPredicted RBP13.52□□□□□ -0.24
RAPGEF3-201ENST00000389212 BCAMP50895 628 aa13.52□□□□□ -0.24
RAPGEF3-201ENST00000389212 PTPN21Q16825 1174 aa13.52□□□□□ -0.24
RAPGEF3-201ENST00000389212 KRT40Q6A162 431 aa13.52□□□□□ -0.24
RAPGEF3-201ENST00000389212 CLIC6Q96NY7 704 aa13.52□□□□□ -0.24
RAPGEF3-201ENST00000389212 EXOC5O00471 708 aa13.52□□□□□ -0.24
RAPGEF3-201ENST00000389212 ZNF202O95125 648 aa13.52□□□□□ -0.24
RAPGEF3-201ENST00000389212 TPD52L1Q16890 204 aaPredicted RBP13.52□□□□□ -0.24
RAPGEF3-201ENST00000389212 TMEM67Q5HYA8 995 aa13.52□□□□□ -0.24
RAPGEF3-201ENST00000389212 SPECC1Q5M775 1068 aa13.52□□□□□ -0.24
RAPGEF3-201ENST00000389212 VPS37DQ86XT2 251 aa13.52□□□□□ -0.24
RAPGEF3-201ENST00000389212 STRBPQ96SI9 672 aaKnown RBP13.52□□□□□ -0.24
RAPGEF3-201ENST00000389212 PFKFB1P16118 471 aa13.52□□□□□ -0.25
RAPGEF3-201ENST00000389212 ZRSR1Q15695 479 aaKnown RBP13.52□□□□□ -0.25
RAPGEF3-201ENST00000389212 SPATA5Q8NB90 893 aa13.52□□□□□ -0.25
RAPGEF3-201ENST00000389212 MPHOSPH8Q99549 860 aa13.52□□□□□ -0.25
RAPGEF3-201ENST00000389212 TCRBV5S4A2TA0A5A2 114 aa13.51□□□□□ -0.25
RAPGEF3-201ENST00000389212 GOLGA8AA7E2F4 631 aa13.51□□□□□ -0.25
RAPGEF3-201ENST00000389212 RANBP6O60518 1105 aaKnown RBP13.51□□□□□ -0.25
RAPGEF3-201ENST00000389212 NAA30Q147X3 362 aaPredicted RBP13.51□□□□□ -0.25
RAPGEF3-201ENST00000389212 PUM3Q15397 648 aaKnown RBP13.51□□□□□ -0.25
RAPGEF3-201ENST00000389212 FBXL16Q8N461 479 aa13.51□□□□□ -0.25
RAPGEF3-201ENST00000389212 KCNG4Q8TDN1 519 aa13.51□□□□□ -0.25
RAPGEF3-201ENST00000389212 NAPBQ9H115 298 aa13.51□□□□□ -0.25
RAPGEF3-201ENST00000389212 KIAA1468Q9P260 1216 aa13.51□□□□□ -0.25
RAPGEF3-201ENST00000389212 SPEF2Q9C093 1822 aa13.51□□□□□ -0.25
RAPGEF3-201ENST00000389212 SMC2O95347 1197 aa13.51□□□□□ -0.25
RAPGEF3-201ENST00000389212 TTF1Q15361 905 aaPredicted RBP13.51□□□□□ -0.25
RAPGEF3-201ENST00000389212 ATL3Q6DD88 541 aa13.51□□□□□ -0.25
RAPGEF3-201ENST00000389212 SMIM5Q71RC9 77 aa13.51□□□□□ -0.25
RAPGEF3-201ENST00000389212 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.51□□□□□ -0.25
RAPGEF3-201ENST00000389212 LRRC8AQ8IWT6 810 aa13.51□□□□□ -0.25
RAPGEF3-201ENST00000389212 SLC26A6Q9BXS9 759 aa13.51□□□□□ -0.25
RAPGEF3-201ENST00000389212 TSPYL1Q9H0U9 437 aa13.51□□□□□ -0.25
RAPGEF3-201ENST00000389212 POLR3EQ9NVU0 708 aa13.51□□□□□ -0.25
RAPGEF3-201ENST00000389212 ZSWIM5Q9P217 1185 aa13.51□□□□□ -0.25
RAPGEF3-201ENST00000389212 ZMYM6O95789 1325 aa13.51□□□□□ -0.25
RAPGEF3-201ENST00000389212 CCDC69A6NI79 296 aa13.51□□□□□ -0.25
RAPGEF3-201ENST00000389212 IFIT3O14879 490 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms