RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 BMP6P22004 513 aa17.14■□□□□ 0.34
CTNS-202ENST00000381870 DDX46Q7L014 1031 aaKnown RBP17.14■□□□□ 0.34
CTNS-202ENST00000381870 FOXP4Q8IVH2 680 aaPredicted RBP17.14■□□□□ 0.34
CTNS-202ENST00000381870 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.14■□□□□ 0.34
CTNS-202ENST00000381870 KDM4FA0A1W2PPD8 638 aa17.14■□□□□ 0.33
CTNS-202ENST00000381870 RNF40O75150 1001 aa17.14■□□□□ 0.33
CTNS-202ENST00000381870 DNAJC21Q5F1R6 531 aaKnown RBP17.14■□□□□ 0.33
CTNS-202ENST00000381870 KAT2BQ92831 832 aa17.14■□□□□ 0.33
CTNS-202ENST00000381870 ZNF274Q96GC6 653 aaPredicted RBP17.14■□□□□ 0.33
CTNS-202ENST00000381870 FER1L4A9Z1Z3 1794 aa17.14■□□□□ 0.33
CTNS-202ENST00000381870 PLEKHG3A1L390 1219 aa17.13■□□□□ 0.33
CTNS-202ENST00000381870 E7EWF7 191 aa17.13■□□□□ 0.33
CTNS-202ENST00000381870 GRM8O00222 908 aa17.13■□□□□ 0.33
CTNS-202ENST00000381870 KIF4BQ2VIQ3 1234 aa17.13■□□□□ 0.33
CTNS-202ENST00000381870 ZNF569Q5MCW4 686 aa17.13■□□□□ 0.33
CTNS-202ENST00000381870 SWT1Q5T5J6 900 aaKnown RBP17.13■□□□□ 0.33
CTNS-202ENST00000381870 SHC4Q6S5L8 630 aa17.13■□□□□ 0.33
CTNS-202ENST00000381870 RAD9BQ6WBX8 426 aa17.13■□□□□ 0.33
CTNS-202ENST00000381870 NRXN3Q9Y4C0 1643 aa17.13■□□□□ 0.33
CTNS-202ENST00000381870 A0A087WUV0 522 aaPredicted RBP17.13■□□□□ 0.33
CTNS-202ENST00000381870 ATP5JP18859 108 aa17.13■□□□□ 0.33
CTNS-202ENST00000381870 PLEKHO1Q53GL0 409 aaPredicted RBP17.13■□□□□ 0.33
CTNS-202ENST00000381870 KSR2Q6VAB6 950 aa17.13■□□□□ 0.33
CTNS-202ENST00000381870 CCDC91Q7Z6B0 441 aa17.13■□□□□ 0.33
CTNS-202ENST00000381870 METTL16Q86W50 562 aaKnown RBP17.13■□□□□ 0.33
CTNS-202ENST00000381870 RAB11FIP4Q86YS3 637 aa17.13■□□□□ 0.33
CTNS-202ENST00000381870 CLIC6Q96NY7 704 aa17.13■□□□□ 0.33
CTNS-202ENST00000381870 ADGRG1Q9Y653 693 aa17.13■□□□□ 0.33
CTNS-202ENST00000381870 KIF5CO60282 957 aa17.12■□□□□ 0.33
CTNS-202ENST00000381870 SYF2O95926 243 aaKnown RBP17.12■□□□□ 0.33
CTNS-202ENST00000381870 NOA1Q8NC60 698 aaKnown RBP17.12■□□□□ 0.33
CTNS-202ENST00000381870 AFAP1L1Q8TED9 768 aa17.12■□□□□ 0.33
CTNS-202ENST00000381870 CXorf56Q9H5V9 222 aa17.12■□□□□ 0.33
CTNS-202ENST00000381870 MED4Q9NPJ6 270 aa17.12■□□□□ 0.33
CTNS-202ENST00000381870 HPSEQ9Y251 543 aa17.12■□□□□ 0.33
CTNS-202ENST00000381870 CCDC9Q9Y3X0 531 aaKnown RBP17.12■□□□□ 0.33
CTNS-202ENST00000381870 PCDHA5Q9Y5H7 936 aa17.12■□□□□ 0.33
CTNS-202ENST00000381870 FOXN1O15353 648 aa17.11■□□□□ 0.33
CTNS-202ENST00000381870 HOXB7P09629 217 aa17.11■□□□□ 0.33
CTNS-202ENST00000381870 LIG3P49916 1009 aa17.11■□□□□ 0.33
CTNS-202ENST00000381870 GSCP56915 257 aaPredicted RBP17.11■□□□□ 0.33
CTNS-202ENST00000381870 FMR1Q06787 632 aaKnown RBP eCLIP17.11■□□□□ 0.33
CTNS-202ENST00000381870 LONRF3Q496Y0 759 aa17.11■□□□□ 0.33
CTNS-202ENST00000381870 BRAPQ7Z569 592 aa17.11■□□□□ 0.33
CTNS-202ENST00000381870 TRMT44Q8IYL2 757 aaKnown RBP17.11■□□□□ 0.33
CTNS-202ENST00000381870 TEX13AQ9BXU3 409 aaPredicted RBP17.11■□□□□ 0.33
CTNS-202ENST00000381870 DBF4Q9UBU7 674 aaPredicted RBP17.11■□□□□ 0.33
CTNS-202ENST00000381870 TAOK2Q9UL54 1235 aa17.11■□□□□ 0.33
CTNS-202ENST00000381870 MYO1BO43795 1136 aa17.11■□□□□ 0.33
CTNS-202ENST00000381870 SLC39A14Q15043 492 aa17.11■□□□□ 0.33
CTNS-202ENST00000381870 EP400NLQ6ZTU2 488 aa17.11■□□□□ 0.33
CTNS-202ENST00000381870 NFE2L3Q9Y4A8 694 aa17.11■□□□□ 0.33
CTNS-202ENST00000381870 EXOC5O00471 708 aa17.1■□□□□ 0.33
CTNS-202ENST00000381870 PRPF6O94906 941 aaKnown RBP17.1■□□□□ 0.33
CTNS-202ENST00000381870 ABL1P00519 1130 aa17.1■□□□□ 0.33
CTNS-202ENST00000381870 KIF23Q02241 960 aaPredicted RBP17.1■□□□□ 0.33
CTNS-202ENST00000381870 SLC35F6Q8N357 371 aa17.1■□□□□ 0.33
CTNS-202ENST00000381870 RIN2Q8WYP3 895 aaPredicted RBP17.1■□□□□ 0.33
CTNS-202ENST00000381870 CEP89Q96ST8 783 aa17.1■□□□□ 0.33
CTNS-202ENST00000381870 CDC5LQ99459 802 aaKnown RBP17.1■□□□□ 0.33
CTNS-202ENST00000381870 CTAGE9A4FU28 777 aa17.1■□□□□ 0.33
CTNS-202ENST00000381870 MYCNP04198 464 aaPredicted RBP17.1■□□□□ 0.33
CTNS-202ENST00000381870 EIF5P55010 431 aaKnown RBP17.1■□□□□ 0.33
CTNS-202ENST00000381870 GBP3Q9H0R5 595 aa17.1■□□□□ 0.33
CTNS-202ENST00000381870 RNF216Q9NWF9 866 aaPredicted RBP17.1■□□□□ 0.33
CTNS-202ENST00000381870 RAI14Q9P0K7 980 aa17.1■□□□□ 0.33
CTNS-202ENST00000381870 ROBO2Q9HCK4 1378 aa17.1■□□□□ 0.33
CTNS-202ENST00000381870 CTAGE15A4D2H0 777 aa17.09■□□□□ 0.33
CTNS-202ENST00000381870 ERLIN2O94905 339 aa17.09■□□□□ 0.33
CTNS-202ENST00000381870 APPP05067 770 aa17.09■□□□□ 0.33
CTNS-202ENST00000381870 CTAGE8P0CG41 777 aa17.09■□□□□ 0.33
CTNS-202ENST00000381870 ZNF18P17022 549 aa17.09■□□□□ 0.33
CTNS-202ENST00000381870 TFCP2Q12800 502 aa17.09■□□□□ 0.33
CTNS-202ENST00000381870 CTAGE6Q86UF2 777 aa17.09■□□□□ 0.33
CTNS-202ENST00000381870 CTAGE4Q8IX94 777 aa17.09■□□□□ 0.33
CTNS-202ENST00000381870 CPLX3Q8WVH0 158 aa17.09■□□□□ 0.33
CTNS-202ENST00000381870 CEMIPQ8WUJ3 1361 aa17.09■□□□□ 0.33
CTNS-202ENST00000381870 NWD1Q149M9 1564 aa17.09■□□□□ 0.33
CTNS-202ENST00000381870 PRAMEF22A3QJZ6 481 aa17.09■□□□□ 0.33
CTNS-202ENST00000381870 AKR1B15C9JRZ8 316 aaPredicted RBP17.09■□□□□ 0.33
CTNS-202ENST00000381870 LTKP29376 864 aa17.09■□□□□ 0.33
CTNS-202ENST00000381870 HOXC9P31274 260 aa17.09■□□□□ 0.33
CTNS-202ENST00000381870 TNNI3KQ59H18 835 aa17.09■□□□□ 0.33
CTNS-202ENST00000381870 EPHA10Q5JZY3 1008 aa17.09■□□□□ 0.33
CTNS-202ENST00000381870 TTLL5Q6EMB2 1281 aa17.09■□□□□ 0.33
CTNS-202ENST00000381870 ARHGEF25Q86VW2 580 aa17.09■□□□□ 0.33
CTNS-202ENST00000381870 DBNDD2Q9BQY9 259 aa17.09■□□□□ 0.33
CTNS-202ENST00000381870 ACBD3Q9H3P7 528 aa17.09■□□□□ 0.33
CTNS-202ENST00000381870 FPGT-TNNI3KV9GXZ4 949 aa17.09■□□□□ 0.33
CTNS-202ENST00000381870 CCDC172P0C7W6 258 aa17.08■□□□□ 0.33
CTNS-202ENST00000381870 FBXW10Q5XX13 1052 aa17.08■□□□□ 0.33
CTNS-202ENST00000381870 IGSF22Q8N9C0 903 aa17.08■□□□□ 0.33
CTNS-202ENST00000381870 LINS1Q8NG48 757 aa17.08■□□□□ 0.33
CTNS-202ENST00000381870 SAMSN1Q9NSI8 373 aaKnown RBP17.08■□□□□ 0.33
CTNS-202ENST00000381870 AIMP1Q12904 312 aaKnown RBP17.08■□□□□ 0.32
CTNS-202ENST00000381870 ZNF827Q17R98 1081 aa17.08■□□□□ 0.32
CTNS-202ENST00000381870 UTYO14607 1347 aa17.07■□□□□ 0.32
CTNS-202ENST00000381870 BTBD11A6QL63 1104 aa17.07■□□□□ 0.32
CTNS-202ENST00000381870 TEX33O43247 280 aa17.07■□□□□ 0.32
CTNS-202ENST00000381870 HNRNPH1P31943 449 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms