RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 ECHDC1Q9NTX5 307 aa19.71■□□□□ 0.75
SNRPB-201ENST00000381342 ATP5JP18859 108 aa19.7■□□□□ 0.74
SNRPB-201ENST00000381342 MECOMQ03112 1051 aa19.7■□□□□ 0.74
SNRPB-201ENST00000381342 COL13A1Q5TAT6 717 aaPredicted RBP19.7■□□□□ 0.74
SNRPB-201ENST00000381342 ZNF384Q8TF68 577 aa19.7■□□□□ 0.74
SNRPB-201ENST00000381342 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.7■□□□□ 0.74
SNRPB-201ENST00000381342 PRMT6Q96LA8 375 aaPredicted RBP19.7■□□□□ 0.74
SNRPB-201ENST00000381342 BOLA2Q9H3K6 86 aa19.7■□□□□ 0.74
SNRPB-201ENST00000381342 ANTXR1Q9H6X2 564 aa19.7■□□□□ 0.74
SNRPB-201ENST00000381342 RAI14Q9P0K7 980 aa19.7■□□□□ 0.74
SNRPB-201ENST00000381342 LRP2BPQ9P2M1 347 aa19.7■□□□□ 0.74
SNRPB-201ENST00000381342 SCAF8Q9UPN6 1271 aaKnown RBP19.7■□□□□ 0.74
SNRPB-201ENST00000381342 SALL3Q9BXA9 1300 aa19.7■□□□□ 0.74
SNRPB-201ENST00000381342 CLRN2A0PK11 232 aa19.69■□□□□ 0.74
SNRPB-201ENST00000381342 HDLBPQ00341 1268 aaKnown RBP19.69■□□□□ 0.74
SNRPB-201ENST00000381342 NUCB1Q02818 461 aa19.69■□□□□ 0.74
SNRPB-201ENST00000381342 IFFO2Q5TF58 517 aa19.69■□□□□ 0.74
SNRPB-201ENST00000381342 CHD1LQ86WJ1 897 aa19.69■□□□□ 0.74
SNRPB-201ENST00000381342 EDC3Q96F86 508 aaKnown RBP19.69■□□□□ 0.74
SNRPB-201ENST00000381342 DAGLAQ9Y4D2 1042 aa19.69■□□□□ 0.74
SNRPB-201ENST00000381342 GOLIM4O00461 696 aa19.68■□□□□ 0.74
SNRPB-201ENST00000381342 MX1P20591 662 aa19.68■□□□□ 0.74
SNRPB-201ENST00000381342 TNS4Q8IZW8 715 aa19.68■□□□□ 0.74
SNRPB-201ENST00000381342 ZDHHC15Q96MV8 337 aa19.68■□□□□ 0.74
SNRPB-201ENST00000381342 VEZTQ9HBM0 779 aa19.68■□□□□ 0.74
SNRPB-201ENST00000381342 PRDM10Q9NQV6 1147 aa19.68■□□□□ 0.74
SNRPB-201ENST00000381342 CA12O43570 354 aa19.67■□□□□ 0.74
SNRPB-201ENST00000381342 PRAMEF18Q5VWM3 479 aa19.67■□□□□ 0.74
SNRPB-201ENST00000381342 HHIPL2Q6UWX4 724 aa19.67■□□□□ 0.74
SNRPB-201ENST00000381342 ARMC9Q7Z3E5 817 aa19.67■□□□□ 0.74
SNRPB-201ENST00000381342 NSUN4Q96CB9 384 aaKnown RBP19.67■□□□□ 0.74
SNRPB-201ENST00000381342 HAUS7Q99871 368 aa19.67■□□□□ 0.74
SNRPB-201ENST00000381342 TDRD3Q9H7E2 651 aaKnown RBP19.67■□□□□ 0.74
SNRPB-201ENST00000381342 PPP2R3BQ9Y5P8 575 aa19.67■□□□□ 0.74
SNRPB-201ENST00000381342 MROH7-TTC4A0A0A0MT08 1334 aa19.67■□□□□ 0.74
SNRPB-201ENST00000381342 TTC41PQ6P2S7 1318 aa19.67■□□□□ 0.74
SNRPB-201ENST00000381342 CDK5RAP2Q96SN8 1893 aa19.67■□□□□ 0.74
SNRPB-201ENST00000381342 IDH1O75874 414 aaKnown RBP19.66■□□□□ 0.74
SNRPB-201ENST00000381342 TNFAIP1Q13829 316 aa19.66■□□□□ 0.74
SNRPB-201ENST00000381342 APOBEC3HQ6NTF7 200 aaKnown RBP19.66■□□□□ 0.74
SNRPB-201ENST00000381342 PI4K2BQ8TCG2 481 aa19.66■□□□□ 0.74
SNRPB-201ENST00000381342 MRIQ9BWK5 157 aa19.66■□□□□ 0.74
SNRPB-201ENST00000381342 DEFB129Q9H1M3 183 aa19.66■□□□□ 0.74
SNRPB-201ENST00000381342 PAG1Q9NWQ8 432 aa19.66■□□□□ 0.74
SNRPB-201ENST00000381342 GAKO14976 1311 aa19.66■□□□□ 0.74
SNRPB-201ENST00000381342 LBX1P52954 281 aa19.65■□□□□ 0.74
SNRPB-201ENST00000381342 SUPT20HL1Q3ZLR7 823 aa19.65■□□□□ 0.74
SNRPB-201ENST00000381342 SPDYE2Q495Y8 402 aa19.65■□□□□ 0.74
SNRPB-201ENST00000381342 ZNF70Q9UC06 446 aaPredicted RBP19.65■□□□□ 0.74
SNRPB-201ENST00000381342 FOCADQ5VW36 1801 aa19.65■□□□□ 0.74
SNRPB-201ENST00000381342 AK9Q5TCS8 1911 aa19.64■□□□□ 0.74
SNRPB-201ENST00000381342 PPP1R12BO60237 982 aaPredicted RBP19.64■□□□□ 0.73
SNRPB-201ENST00000381342 TNNI2P48788 182 aa19.64■□□□□ 0.73
SNRPB-201ENST00000381342 CACNB3P54284 484 aa19.64■□□□□ 0.73
SNRPB-201ENST00000381342 GSTO1P78417 241 aa19.64■□□□□ 0.73
SNRPB-201ENST00000381342 TTF1Q15361 905 aaPredicted RBP19.64■□□□□ 0.73
SNRPB-201ENST00000381342 NAA16Q6N069 864 aaPredicted RBP19.64■□□□□ 0.73
SNRPB-201ENST00000381342 SLF2Q8IX21 1173 aa19.64■□□□□ 0.73
SNRPB-201ENST00000381342 REM2Q8IYK8 340 aaPredicted RBP19.64■□□□□ 0.73
SNRPB-201ENST00000381342 UBE2Q2LH0YL09 131 aa19.63■□□□□ 0.73
SNRPB-201ENST00000381342 ERC2O15083 957 aa19.63■□□□□ 0.73
SNRPB-201ENST00000381342 MAP4K4O95819 1239 aaPredicted RBP19.63■□□□□ 0.73
SNRPB-201ENST00000381342 BTDP43251 543 aa19.63■□□□□ 0.73
SNRPB-201ENST00000381342 PDE1AP54750 535 aa19.63■□□□□ 0.73
SNRPB-201ENST00000381342 PRKG1Q13976 671 aa19.63■□□□□ 0.73
SNRPB-201ENST00000381342 TMOD2Q9NZR1 351 aa19.63■□□□□ 0.73
SNRPB-201ENST00000381342 STAP2Q9UGK3 403 aa19.63■□□□□ 0.73
SNRPB-201ENST00000381342 GLRX3O76003 335 aaKnown RBP19.62■□□□□ 0.73
SNRPB-201ENST00000381342 SLC10A3P09131 477 aa19.62■□□□□ 0.73
SNRPB-201ENST00000381342 HSPA8P11142 646 aaKnown RBP19.62■□□□□ 0.73
SNRPB-201ENST00000381342 KIF23Q02241 960 aaPredicted RBP19.62■□□□□ 0.73
SNRPB-201ENST00000381342 MAP3K12Q12852 859 aa19.62■□□□□ 0.73
SNRPB-201ENST00000381342 CDC42EP5Q6NZY7 148 aa19.62■□□□□ 0.73
SNRPB-201ENST00000381342 ADGRA1Q86SQ6 560 aa19.62■□□□□ 0.73
SNRPB-201ENST00000381342 MAGEB6Q8N7X4 407 aa19.62■□□□□ 0.73
SNRPB-201ENST00000381342 FAM163AQ96GL9 167 aaPredicted RBP19.62■□□□□ 0.73
SNRPB-201ENST00000381342 ANGEL1Q9UNK9 670 aaKnown RBP19.62■□□□□ 0.73
SNRPB-201ENST00000381342 PAPPA2Q9BXP8 1791 aa19.62■□□□□ 0.73
SNRPB-201ENST00000381342 TCP10L2B9ZVM9 353 aa19.61■□□□□ 0.73
SNRPB-201ENST00000381342 PDE4AP27815 886 aa19.61■□□□□ 0.73
SNRPB-201ENST00000381342 MOB2Q70IA6 237 aa19.61■□□□□ 0.73
SNRPB-201ENST00000381342 CENPQQ7L2Z9 268 aaPredicted RBP19.61■□□□□ 0.73
SNRPB-201ENST00000381342 CCDC136Q96JN2 1154 aa19.61■□□□□ 0.73
SNRPB-201ENST00000381342 RFX7Q2KHR2 1363 aa19.6■□□□□ 0.73
SNRPB-201ENST00000381342 FAM155AB1AL88 458 aaPredicted RBP19.6■□□□□ 0.73
SNRPB-201ENST00000381342 LDHCP07864 332 aa19.6■□□□□ 0.73
SNRPB-201ENST00000381342 PDE6AP16499 860 aa19.6■□□□□ 0.73
SNRPB-201ENST00000381342 CYP7A1P22680 504 aa19.6■□□□□ 0.73
SNRPB-201ENST00000381342 RASA3Q14644 834 aa19.6■□□□□ 0.73
SNRPB-201ENST00000381342 PLEKHM2Q8IWE5 1019 aa19.6■□□□□ 0.73
SNRPB-201ENST00000381342 USP40Q9NVE5 1235 aa19.6■□□□□ 0.73
SNRPB-201ENST00000381342 THSD7BQ9C0I4 1608 aa19.59■□□□□ 0.73
SNRPB-201ENST00000381342 SSC5DA1L4H1 1573 aa19.59■□□□□ 0.73
SNRPB-201ENST00000381342 GPR75-ASB3A0A0A6YYF3 556 aa19.59■□□□□ 0.73
SNRPB-201ENST00000381342 SLC9C2Q5TAH2 1124 aa19.59■□□□□ 0.73
SNRPB-201ENST00000381342 RASAL3Q86YV0 1011 aa19.59■□□□□ 0.73
SNRPB-201ENST00000381342 NAV1Q8NEY1 1877 aa19.58■□□□□ 0.73
SNRPB-201ENST00000381342 IGSF3O75054 1194 aa19.58■□□□□ 0.72
SNRPB-201ENST00000381342 CHGBP05060 677 aa19.58■□□□□ 0.72
SNRPB-201ENST00000381342 IREB2P48200 963 aaKnown RBP19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms