RNA–Protein interactions for RNA: ENST00000380853.1

TTC39B-203, Transcript of tetratricopeptide repeat domain 39B, humanhuman

TSL 1 (best)

Gene TTC39B, Length 1,326 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-203ENST00000380853 UFL1O94874 794 aa8.69□□□□□ -1.02
TTC39B-203ENST00000380853 CCNYL3P0C7X3 344 aa8.69□□□□□ -1.02
TTC39B-203ENST00000380853 NEXNQ0ZGT2 675 aa8.69□□□□□ -1.02
TTC39B-203ENST00000380853 SF3B3Q15393 1217 aaKnown RBP8.69□□□□□ -1.02
TTC39B-203ENST00000380853 CCDC152Q4G0S7 254 aa8.69□□□□□ -1.02
TTC39B-203ENST00000380853 ZBTB38Q8NAP3 1195 aaPredicted RBP8.69□□□□□ -1.02
TTC39B-203ENST00000380853 CELF1Q92879 486 aaKnown RBP8.69□□□□□ -1.02
TTC39B-203ENST00000380853 FAM217BQ9NTX9 383 aaPredicted RBP8.69□□□□□ -1.02
TTC39B-203ENST00000380853 CWC25Q9NXE8 425 aaPredicted RBP8.69□□□□□ -1.02
TTC39B-203ENST00000380853 WDR33Q9C0J8 1336 aaKnown RBP8.69□□□□□ -1.02
TTC39B-203ENST00000380853 THSD7BQ9C0I4 1608 aa8.68□□□□□ -1.02
TTC39B-203ENST00000380853 ECE2O60344 883 aa8.68□□□□□ -1.02
TTC39B-203ENST00000380853 CELF2O95319 508 aaKnown RBP8.68□□□□□ -1.02
TTC39B-203ENST00000380853 ZNF853P0CG23 659 aa8.68□□□□□ -1.02
TTC39B-203ENST00000380853 GPSM2P81274 684 aa8.68□□□□□ -1.02
TTC39B-203ENST00000380853 MAP2K1Q02750 393 aaPredicted RBP8.68□□□□□ -1.02
TTC39B-203ENST00000380853 CCDC191Q8NCU4 936 aa8.68□□□□□ -1.02
TTC39B-203ENST00000380853 CAPNS2Q96L46 248 aa8.68□□□□□ -1.02
TTC39B-203ENST00000380853 CCDC85AQ96PX6 553 aaPredicted RBP8.68□□□□□ -1.02
TTC39B-203ENST00000380853 GLIS2Q9BZE0 524 aaPredicted RBP8.68□□□□□ -1.02
TTC39B-203ENST00000380853 UNC93B1Q9H1C4 597 aa8.68□□□□□ -1.02
TTC39B-203ENST00000380853 PHAXQ9H814 394 aaKnown RBP8.68□□□□□ -1.02
TTC39B-203ENST00000380853 GPCPD1Q9NPB8 672 aa8.68□□□□□ -1.02
TTC39B-203ENST00000380853 ANKIB1Q9P2G1 1089 aa8.68□□□□□ -1.02
TTC39B-203ENST00000380853 SPEF2Q9C093 1822 aa8.68□□□□□ -1.02
TTC39B-203ENST00000380853 LOC100996750A0A140TA64 210 aa8.67□□□□□ -1.02
TTC39B-203ENST00000380853 SOBPA7XYQ1 873 aa8.67□□□□□ -1.02
TTC39B-203ENST00000380853 PDE8AO60658 829 aa8.67□□□□□ -1.02
TTC39B-203ENST00000380853 PCCAP05165 728 aaPredicted RBP8.67□□□□□ -1.02
TTC39B-203ENST00000380853 FDX1P10109 184 aa8.67□□□□□ -1.02
TTC39B-203ENST00000380853 MS4A1P11836 297 aa8.67□□□□□ -1.02
TTC39B-203ENST00000380853 RPS8P62241 208 aaKnown RBP8.67□□□□□ -1.02
TTC39B-203ENST00000380853 FMR1Q06787 632 aaKnown RBP eCLIP8.67□□□□□ -1.02
TTC39B-203ENST00000380853 TRIM28Q13263 835 aaKnown RBP8.67□□□□□ -1.02
TTC39B-203ENST00000380853 CYP4F22Q6NT55 531 aa8.67□□□□□ -1.02
TTC39B-203ENST00000380853 ANKRD18AQ8IVF6 992 aa8.67□□□□□ -1.02
TTC39B-203ENST00000380853 C8orf58Q8NAV2 365 aa8.67□□□□□ -1.02
TTC39B-203ENST00000380853 TRPM4Q8TD43 1214 aa8.67□□□□□ -1.02
TTC39B-203ENST00000380853 TSR2Q969E8 191 aaKnown RBP8.67□□□□□ -1.02
TTC39B-203ENST00000380853 GPR101Q96P66 508 aaPredicted RBP8.67□□□□□ -1.02
TTC39B-203ENST00000380853 METTL22Q9BUU2 404 aaPredicted RBP8.67□□□□□ -1.02
TTC39B-203ENST00000380853 KRTAP4-6Q9BYQ5 205 aa8.67□□□□□ -1.02
TTC39B-203ENST00000380853 ZC3H12CQ9C0D7 883 aaKnown RBP8.67□□□□□ -1.02
TTC39B-203ENST00000380853 MRS2Q9HD23 443 aa8.67□□□□□ -1.02
TTC39B-203ENST00000380853 PRDM10Q9NQV6 1147 aa8.67□□□□□ -1.02
TTC39B-203ENST00000380853 CNOT7Q9UIV1 285 aaKnown RBP8.67□□□□□ -1.02
TTC39B-203ENST00000380853 GGA1Q9UJY5 639 aa8.67□□□□□ -1.02
TTC39B-203ENST00000380853 MAP3K2Q9Y2U5 619 aa8.67□□□□□ -1.02
TTC39B-203ENST00000380853 MYH3P11055 1940 aa8.67□□□□□ -1.02
TTC39B-203ENST00000380853 COL4A1P02462 1669 aa8.67□□□□□ -1.02
TTC39B-203ENST00000380853 YDJCA8MPS7 323 aa8.66□□□□□ -1.02
TTC39B-203ENST00000380853 PSMD14O00487 310 aa8.66□□□□□ -1.02
TTC39B-203ENST00000380853 ANP32CO43423 234 aa8.66□□□□□ -1.02
TTC39B-203ENST00000380853 RPS12P25398 132 aaKnown RBP8.66□□□□□ -1.02
TTC39B-203ENST00000380853 LBX1P52954 281 aa8.66□□□□□ -1.02
TTC39B-203ENST00000380853 NNTQ13423 1086 aa8.66□□□□□ -1.02
TTC39B-203ENST00000380853 CDC37L1Q7L3B6 337 aa8.66□□□□□ -1.02
TTC39B-203ENST00000380853 ZC3H15Q8WU90 426 aaKnown RBP8.66□□□□□ -1.02
TTC39B-203ENST00000380853 BAP1Q92560 729 aa8.66□□□□□ -1.02
TTC39B-203ENST00000380853 JARID2Q92833 1246 aaPredicted RBP8.66□□□□□ -1.02
TTC39B-203ENST00000380853 PURBQ96QR8 312 aaKnown RBP8.66□□□□□ -1.02
TTC39B-203ENST00000380853 CDC5LQ99459 802 aaKnown RBP8.66□□□□□ -1.02
TTC39B-203ENST00000380853 XDHP47989 1333 aa8.66□□□□□ -1.02
TTC39B-203ENST00000380853 SHTN1A0MZ66 631 aa8.65□□□□□ -1.02
TTC39B-203ENST00000380853 HSPA8P11142 646 aaKnown RBP8.65□□□□□ -1.02
TTC39B-203ENST00000380853 ZEB1P37275 1124 aaPredicted RBP8.65□□□□□ -1.02
TTC39B-203ENST00000380853 CTSWP56202 376 aa8.65□□□□□ -1.02
TTC39B-203ENST00000380853 KIF4BQ2VIQ3 1234 aa8.65□□□□□ -1.02
TTC39B-203ENST00000380853 TWISTNBQ3B726 338 aaPredicted RBP8.65□□□□□ -1.02
TTC39B-203ENST00000380853 TBC1D10BQ4KMP7 808 aaPredicted RBP8.65□□□□□ -1.02
TTC39B-203ENST00000380853 MRPL14Q6P1L8 145 aaKnown RBP8.65□□□□□ -1.02
TTC39B-203ENST00000380853 KRT26Q7Z3Y9 468 aa8.65□□□□□ -1.02
TTC39B-203ENST00000380853 TBC1D16Q8TBP0 767 aa8.65□□□□□ -1.02
TTC39B-203ENST00000380853 DCPSQ96C86 337 aaKnown RBP8.65□□□□□ -1.02
TTC39B-203ENST00000380853 SEC31BQ9NQW1 1179 aa8.65□□□□□ -1.02
TTC39B-203ENST00000380853 POLLQ9UGP5 575 aa8.65□□□□□ -1.02
TTC39B-203ENST00000380853 PI4KAP2A4QPH2 592 aa8.64□□□□□ -1.03
TTC39B-203ENST00000380853 CLCN1P35523 988 aa8.64□□□□□ -1.03
TTC39B-203ENST00000380853 PTPRNQ16849 979 aa8.64□□□□□ -1.03
TTC39B-203ENST00000380853 KSR2Q6VAB6 950 aa8.64□□□□□ -1.03
TTC39B-203ENST00000380853 USP48Q86UV5 1035 aa8.64□□□□□ -1.03
TTC39B-203ENST00000380853 TSPYL6Q8N831 410 aa8.64□□□□□ -1.03
TTC39B-203ENST00000380853 PI4KAP1Q8N8J0 262 aa8.64□□□□□ -1.03
TTC39B-203ENST00000380853 DPF2Q92785 391 aa8.64□□□□□ -1.03
TTC39B-203ENST00000380853 PSME4Q14997 1843 aa8.64□□□□□ -1.03
TTC39B-203ENST00000380853 AOC2O75106 756 aa8.63□□□□□ -1.03
TTC39B-203ENST00000380853 TIMP2P16035 220 aa8.63□□□□□ -1.03
TTC39B-203ENST00000380853 ATP2B4P23634 1241 aa8.63□□□□□ -1.03
TTC39B-203ENST00000380853 IGHMBP2P38935 993 aaKnown RBP8.63□□□□□ -1.03
TTC39B-203ENST00000380853 HUNKP57058 714 aa8.63□□□□□ -1.03
TTC39B-203ENST00000380853 FKBP5Q13451 457 aaPredicted RBP8.63□□□□□ -1.03
TTC39B-203ENST00000380853 CCDC27Q2M243 656 aa8.63□□□□□ -1.03
TTC39B-203ENST00000380853 CCDC184Q52MB2 194 aa8.63□□□□□ -1.03
TTC39B-203ENST00000380853 CST9Q5W186 159 aa8.63□□□□□ -1.03
TTC39B-203ENST00000380853 UBE3BQ7Z3V4 1068 aa8.63□□□□□ -1.03
TTC39B-203ENST00000380853 WWC1Q8IX03 1113 aa8.63□□□□□ -1.03
TTC39B-203ENST00000380853 ZNF511Q8NB15 262 aa8.63□□□□□ -1.03
TTC39B-203ENST00000380853 MYH16Q9H6N6 1097 aa8.63□□□□□ -1.03
TTC39B-203ENST00000380853 GGA3Q9NZ52 723 aa8.63□□□□□ -1.03
TTC39B-203ENST00000380853 PODXL2Q9NZ53 605 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms