RNA–Protein interactions for RNA: ENST00000380249.5

FOCAD-202, Transcript of focadhesin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOCAD, Length 6,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-202ENST00000380249 TAF1P21675 1872 aa7.48□□□□□ -1.21
FOCAD-202ENST00000380249 PCP11498 1178 aaKnown RBP7.48□□□□□ -1.21
FOCAD-202ENST00000380249 SUPT20HL1Q3ZLR7 823 aa7.48□□□□□ -1.21
FOCAD-202ENST00000380249 APOBEC3HQ6NTF7 200 aaKnown RBP7.48□□□□□ -1.21
FOCAD-202ENST00000380249 FOXP4Q8IVH2 680 aaPredicted RBP7.48□□□□□ -1.21
FOCAD-202ENST00000380249 ZMYM6O95789 1325 aa7.47□□□□□ -1.21
FOCAD-202ENST00000380249 MAGEB6P1A0A0J9YX57 407 aa7.47□□□□□ -1.21
FOCAD-202ENST00000380249 WNT10BO00744 389 aa7.47□□□□□ -1.21
FOCAD-202ENST00000380249 FKBP1BP68106 108 aa7.47□□□□□ -1.21
FOCAD-202ENST00000380249 DCAF15Q66K64 600 aa7.47□□□□□ -1.21
FOCAD-202ENST00000380249 MAGEB6Q8N7X4 407 aa7.47□□□□□ -1.21
FOCAD-202ENST00000380249 DCPSQ96C86 337 aaKnown RBP7.47□□□□□ -1.21
FOCAD-202ENST00000380249 TEX11Q8IYF3 940 aa7.47□□□□□ -1.21
FOCAD-202ENST00000380249 COL1A1P02452 1464 aaPredicted RBP7.47□□□□□ -1.21
FOCAD-202ENST00000380249 CHMLP26374 656 aa7.47□□□□□ -1.21
FOCAD-202ENST00000380249 EPS15P42566 896 aa7.47□□□□□ -1.21
FOCAD-202ENST00000380249 BTDP43251 543 aa7.47□□□□□ -1.21
FOCAD-202ENST00000380249 DIXDC1Q155Q3 683 aa7.47□□□□□ -1.21
FOCAD-202ENST00000380249 PPP4R3BQ5MIZ7 849 aa7.47□□□□□ -1.21
FOCAD-202ENST00000380249 SLC51AQ86UW1 340 aa7.47□□□□□ -1.21
FOCAD-202ENST00000380249 STRBPQ96SI9 672 aaKnown RBP7.47□□□□□ -1.21
FOCAD-202ENST00000380249 RIOK1Q9BRS2 568 aaKnown RBP7.47□□□□□ -1.21
FOCAD-202ENST00000380249 HLA-DOAP06340 250 aa7.47□□□□□ -1.21
FOCAD-202ENST00000380249 YY1P25490 414 aa7.47□□□□□ -1.21
FOCAD-202ENST00000380249 ARAP2Q8WZ64 1704 aa7.47□□□□□ -1.21
FOCAD-202ENST00000380249 SGSM2O43147 1006 aa7.47□□□□□ -1.21
FOCAD-202ENST00000380249 DSCC1Q9BVC3 393 aa7.47□□□□□ -1.21
FOCAD-202ENST00000380249 USP40Q9NVE5 1235 aa7.47□□□□□ -1.21
FOCAD-202ENST00000380249 SLC3A2P08195 630 aaKnown RBP7.46□□□□□ -1.21
FOCAD-202ENST00000380249 GSPT1P15170 499 aaKnown RBP7.46□□□□□ -1.21
FOCAD-202ENST00000380249 CHADLQ6NUI6 762 aa7.46□□□□□ -1.21
FOCAD-202ENST00000380249 RBM46Q8TBY0 533 aaKnown RBP7.46□□□□□ -1.21
FOCAD-202ENST00000380249 CCDC171Q6TFL3 1326 aa7.46□□□□□ -1.21
FOCAD-202ENST00000380249 COL2A1P02458 1487 aaPredicted RBP7.46□□□□□ -1.21
FOCAD-202ENST00000380249 RHBDL3P58872 404 aa7.46□□□□□ -1.22
FOCAD-202ENST00000380249 UPF2Q9HAU5 1272 aaKnown RBP7.46□□□□□ -1.22
FOCAD-202ENST00000380249 KCNQ5Q9NR82 932 aa7.46□□□□□ -1.22
FOCAD-202ENST00000380249 ZNF70Q9UC06 446 aaPredicted RBP7.46□□□□□ -1.22
FOCAD-202ENST00000380249 F8W031 263 aaPredicted RBP7.46□□□□□ -1.22
FOCAD-202ENST00000380249 TOMM70O94826 608 aa7.46□□□□□ -1.22
FOCAD-202ENST00000380249 SBK1Q52WX2 424 aa7.46□□□□□ -1.22
FOCAD-202ENST00000380249 RNF20Q5VTR2 975 aa7.46□□□□□ -1.22
FOCAD-202ENST00000380249 ARPP21Q9UBL0 812 aaPredicted RBP7.46□□□□□ -1.22
FOCAD-202ENST00000380249 HERC5Q9UII4 1024 aaKnown RBP7.46□□□□□ -1.22
FOCAD-202ENST00000380249 GPAA1O43292 621 aa7.46□□□□□ -1.22
FOCAD-202ENST00000380249 PRMT6Q96LA8 375 aaPredicted RBP7.46□□□□□ -1.22
FOCAD-202ENST00000380249 MTA3Q9BTC8 594 aa7.46□□□□□ -1.22
FOCAD-202ENST00000380249 EHD4Q9H223 541 aa7.46□□□□□ -1.22
FOCAD-202ENST00000380249 CHD4Q14839 1912 aa7.46□□□□□ -1.22
FOCAD-202ENST00000380249 DICER1Q9UPY3 1922 aaKnown RBP7.46□□□□□ -1.22
FOCAD-202ENST00000380249 ATRNL1Q5VV63 1379 aa7.46□□□□□ -1.22
FOCAD-202ENST00000380249 TCRBV5S4A2TA0A5A2 114 aa7.45□□□□□ -1.22
FOCAD-202ENST00000380249 TSHZ3Q63HK5 1081 aa7.45□□□□□ -1.22
FOCAD-202ENST00000380249 RNF41Q9H4P4 317 aaPredicted RBP7.45□□□□□ -1.22
FOCAD-202ENST00000380249 MBD4O95243 580 aa7.45□□□□□ -1.22
FOCAD-202ENST00000380249 EDC3Q96F86 508 aaKnown RBP7.45□□□□□ -1.22
FOCAD-202ENST00000380249 COL4A5P29400 1685 aa7.45□□□□□ -1.22
FOCAD-202ENST00000380249 JAG2Q9Y219 1238 aa7.45□□□□□ -1.22
FOCAD-202ENST00000380249 U3KPZ7 1027 aaPredicted RBP7.45□□□□□ -1.22
FOCAD-202ENST00000380249 PPP1R12BO60237 982 aaPredicted RBP7.45□□□□□ -1.22
FOCAD-202ENST00000380249 WDHD1O75717 1129 aaPredicted RBP7.45□□□□□ -1.22
FOCAD-202ENST00000380249 USP5P45974 858 aa7.45□□□□□ -1.22
FOCAD-202ENST00000380249 TBC1D10BQ4KMP7 808 aaPredicted RBP7.45□□□□□ -1.22
FOCAD-202ENST00000380249 CDC42EP5Q6NZY7 148 aa7.45□□□□□ -1.22
FOCAD-202ENST00000380249 OSBP2Q969R2 916 aa7.45□□□□□ -1.22
FOCAD-202ENST00000380249 CCDC17Q96LX7 622 aa7.45□□□□□ -1.22
FOCAD-202ENST00000380249 TSHZ2Q9NRE2 1034 aa7.45□□□□□ -1.22
FOCAD-202ENST00000380249 PATL2C9JE40 543 aaKnown RBP7.45□□□□□ -1.22
FOCAD-202ENST00000380249 FSTL1Q12841 308 aa7.45□□□□□ -1.22
FOCAD-202ENST00000380249 SAMD7Q7Z3H4 446 aa7.45□□□□□ -1.22
FOCAD-202ENST00000380249 SMC1BQ8NDV3 1235 aa7.45□□□□□ -1.22
FOCAD-202ENST00000380249 NAPBQ9H115 298 aa7.45□□□□□ -1.22
FOCAD-202ENST00000380249 ZNF384Q8TF68 577 aa7.44□□□□□ -1.22
FOCAD-202ENST00000380249 NMRK2Q9NPI5 230 aa7.44□□□□□ -1.22
FOCAD-202ENST00000380249 GGA3Q9NZ52 723 aa7.44□□□□□ -1.22
FOCAD-202ENST00000380249 PI4KBQ9UBF8 816 aa7.44□□□□□ -1.22
FOCAD-202ENST00000380249 POTECB2RU33 542 aa7.44□□□□□ -1.22
FOCAD-202ENST00000380249 MCCP23508 829 aa7.44□□□□□ -1.22
FOCAD-202ENST00000380249 KRT26Q7Z3Y9 468 aa7.44□□□□□ -1.22
FOCAD-202ENST00000380249 ANP32BQ92688 251 aaKnown RBP7.44□□□□□ -1.22
FOCAD-202ENST00000380249 ESYT1Q9BSJ8 1104 aa7.44□□□□□ -1.22
FOCAD-202ENST00000380249 ZKSCAN1P17029 563 aaPredicted RBP7.44□□□□□ -1.22
FOCAD-202ENST00000380249 NMIQ13287 307 aaPredicted RBP7.44□□□□□ -1.22
FOCAD-202ENST00000380249 KRT32Q14532 448 aa7.44□□□□□ -1.22
FOCAD-202ENST00000380249 OSBPL5Q9H0X9 879 aaPredicted RBP7.44□□□□□ -1.22
FOCAD-202ENST00000380249 TDRD3Q9H7E2 651 aaKnown RBP7.44□□□□□ -1.22
FOCAD-202ENST00000380249 CLEC11AQ9Y240 323 aa7.44□□□□□ -1.22
FOCAD-202ENST00000380249 SBF1O95248 1867 aa7.44□□□□□ -1.22
FOCAD-202ENST00000380249 DCP1AQ9NPI6 582 aaPredicted RBP7.44□□□□□ -1.22
FOCAD-202ENST00000380249 TBC1D12O60347 775 aa7.44□□□□□ -1.22
FOCAD-202ENST00000380249 CCDC178Q5BJE1 867 aa7.44□□□□□ -1.22
FOCAD-202ENST00000380249 DEFB129Q9H1M3 183 aa7.44□□□□□ -1.22
FOCAD-202ENST00000380249 AATFQ9NY61 560 aaKnown RBP eCLIP7.44□□□□□ -1.22
FOCAD-202ENST00000380249 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.44□□□□□ -1.22
FOCAD-202ENST00000380249 SWAP70Q9UH65 585 aa7.44□□□□□ -1.22
FOCAD-202ENST00000380249 MKRN1Q9UHC7 482 aaKnown RBP7.44□□□□□ -1.22
FOCAD-202ENST00000380249 RASA3Q14644 834 aa7.43□□□□□ -1.22
FOCAD-202ENST00000380249 GRIK5Q16478 980 aa7.43□□□□□ -1.22
FOCAD-202ENST00000380249 RBM26Q5T8P6 1007 aaKnown RBP7.43□□□□□ -1.22
FOCAD-202ENST00000380249 ANGEL2Q5VTE6 544 aaKnown RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms