RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 AKNAD1Q5T1N1 836 aa23.37■■□□□ 1.33
PDLIM5-205ENST00000380180 TDRD7Q8NHU6 1098 aaKnown RBP23.37■■□□□ 1.33
PDLIM5-205ENST00000380180 CNPY2Q9Y2B0 182 aa23.37■■□□□ 1.33
PDLIM5-205ENST00000380180 KLF18A0A0U1RQI7 1052 aa23.36■■□□□ 1.33
PDLIM5-205ENST00000380180 ZNF804AQ7Z570 1209 aa23.36■■□□□ 1.33
PDLIM5-205ENST00000380180 USP48Q86UV5 1035 aa23.36■■□□□ 1.33
PDLIM5-205ENST00000380180 BRIP1Q9BX63 1249 aa23.36■■□□□ 1.33
PDLIM5-205ENST00000380180 UFL1O94874 794 aa23.35■■□□□ 1.33
PDLIM5-205ENST00000380180 ATP2B4P23634 1241 aa23.35■■□□□ 1.33
PDLIM5-205ENST00000380180 CHMP4CQ96CF2 233 aa23.35■■□□□ 1.33
PDLIM5-205ENST00000380180 KIAA1551Q9HCM1 1747 aa23.35■■□□□ 1.33
PDLIM5-205ENST00000380180 PTPDC1A2A3K4 754 aa23.35■■□□□ 1.33
PDLIM5-205ENST00000380180 MFSD6Q6ZSS7 791 aa23.35■■□□□ 1.33
PDLIM5-205ENST00000380180 FAM184AQ8NB25 1140 aa23.35■■□□□ 1.33
PDLIM5-205ENST00000380180 GGA1Q9UJY5 639 aa23.35■■□□□ 1.33
PDLIM5-205ENST00000380180 ANGEL1Q9UNK9 670 aaKnown RBP23.35■■□□□ 1.33
PDLIM5-205ENST00000380180 MYH2Q9UKX2 1941 aa23.35■■□□□ 1.33
PDLIM5-205ENST00000380180 HMGN5P82970 282 aaKnown RBP23.34■■□□□ 1.33
PDLIM5-205ENST00000380180 FERMT3Q86UX7 667 aa23.34■■□□□ 1.33
PDLIM5-205ENST00000380180 STAG1Q8WVM7 1258 aa23.34■■□□□ 1.33
PDLIM5-205ENST00000380180 CNNM2Q9H8M5 875 aa23.34■■□□□ 1.33
PDLIM5-205ENST00000380180 ZSWIM5Q9P217 1185 aa23.34■■□□□ 1.33
PDLIM5-205ENST00000380180 HPS5Q9UPZ3 1129 aa23.34■■□□□ 1.33
PDLIM5-205ENST00000380180 LRRC37AA6NMS7 1700 aa23.34■■□□□ 1.33
PDLIM5-205ENST00000380180 MMP10P09238 476 aa23.33■■□□□ 1.33
PDLIM5-205ENST00000380180 DNM1Q05193 864 aaKnown RBP23.33■■□□□ 1.33
PDLIM5-205ENST00000380180 SPTY2D1Q68D10 685 aaPredicted RBP23.33■■□□□ 1.33
PDLIM5-205ENST00000380180 CAVIN1Q6NZI2 390 aaKnown RBP23.33■■□□□ 1.33
PDLIM5-205ENST00000380180 WDR66Q8TBY9 1149 aa23.33■■□□□ 1.33
PDLIM5-205ENST00000380180 KRT23Q9C075 422 aa23.33■■□□□ 1.33
PDLIM5-205ENST00000380180 PODXL2Q9NZ53 605 aa23.33■■□□□ 1.33
PDLIM5-205ENST00000380180 SALL1Q9NSC2 1324 aa23.33■■□□□ 1.33
PDLIM5-205ENST00000380180 SH2B2O14492 632 aaPredicted RBP23.33■■□□□ 1.32
PDLIM5-205ENST00000380180 KDM4AO75164 1064 aa23.33■■□□□ 1.32
PDLIM5-205ENST00000380180 PPARAQ07869 468 aa23.33■■□□□ 1.32
PDLIM5-205ENST00000380180 TMEM87AQ8NBN3 555 aa23.33■■□□□ 1.32
PDLIM5-205ENST00000380180 IGDCC4Q8TDY8 1250 aa23.33■■□□□ 1.32
PDLIM5-205ENST00000380180 TMEM87BQ96K49 555 aa23.33■■□□□ 1.32
PDLIM5-205ENST00000380180 FSD2A1L4K1 749 aa23.32■■□□□ 1.32
PDLIM5-205ENST00000380180 GOLGA8BA8MQT2 603 aa23.32■■□□□ 1.32
PDLIM5-205ENST00000380180 AATFQ9NY61 560 aaKnown RBP eCLIP23.32■■□□□ 1.32
PDLIM5-205ENST00000380180 LTBP1Q14766 1721 aa23.32■■□□□ 1.32
PDLIM5-205ENST00000380180 GOLGA6L3A6NEY3 463 aa23.32■■□□□ 1.32
PDLIM5-205ENST00000380180 MINDY4BA8MYZ0 360 aa23.32■■□□□ 1.32
PDLIM5-205ENST00000380180 GADD45BO75293 160 aaPredicted RBP23.32■■□□□ 1.32
PDLIM5-205ENST00000380180 STK11IPQ8N1F8 1099 aa23.32■■□□□ 1.32
PDLIM5-205ENST00000380180 POLLQ9UGP5 575 aa23.32■■□□□ 1.32
PDLIM5-205ENST00000380180 PARP3Q9Y6F1 533 aa23.32■■□□□ 1.32
PDLIM5-205ENST00000380180 MBD3O95983 291 aa23.31■■□□□ 1.32
PDLIM5-205ENST00000380180 SRGNP10124 158 aa23.31■■□□□ 1.32
PDLIM5-205ENST00000380180 MSL1Q68DK7 614 aa23.31■■□□□ 1.32
PDLIM5-205ENST00000380180 TMED8Q6PL24 325 aaPredicted RBP23.31■■□□□ 1.32
PDLIM5-205ENST00000380180 RAB11FIP4Q86YS3 637 aa23.31■■□□□ 1.32
PDLIM5-205ENST00000380180 SP8Q8IXZ3 490 aa23.31■■□□□ 1.32
PDLIM5-205ENST00000380180 TBC1D16Q8TBP0 767 aa23.31■■□□□ 1.32
PDLIM5-205ENST00000380180 CD209Q9NNX6 404 aa23.31■■□□□ 1.32
PDLIM5-205ENST00000380180 PPEF1O14829 653 aaPredicted RBP23.3■■□□□ 1.32
PDLIM5-205ENST00000380180 PPFIA3O75145 1194 aa23.3■■□□□ 1.32
PDLIM5-205ENST00000380180 RRP12Q5JTH9 1297 aaKnown RBP23.3■■□□□ 1.32
PDLIM5-205ENST00000380180 TMC4Q7Z404 712 aa23.3■■□□□ 1.32
PDLIM5-205ENST00000380180 DZIP1Q86YF9 867 aaKnown RBP23.3■■□□□ 1.32
PDLIM5-205ENST00000380180 SENP2Q9HC62 589 aa23.3■■□□□ 1.32
PDLIM5-205ENST00000380180 ANAPC4Q9UJX5 808 aa23.3■■□□□ 1.32
PDLIM5-205ENST00000380180 H3BQV1 296 aa23.3■■□□□ 1.32
PDLIM5-205ENST00000380180 DHX16O60231 1041 aaKnown RBP23.3■■□□□ 1.32
PDLIM5-205ENST00000380180 LDHBP07195 334 aaKnown RBP23.3■■□□□ 1.32
PDLIM5-205ENST00000380180 IFFO2Q5TF58 517 aa23.3■■□□□ 1.32
PDLIM5-205ENST00000380180 RNF41Q9H4P4 317 aaPredicted RBP23.3■■□□□ 1.32
PDLIM5-205ENST00000380180 TOMM22Q9NS69 142 aa23.3■■□□□ 1.32
PDLIM5-205ENST00000380180 KIF3AQ9Y496 699 aa23.3■■□□□ 1.32
PDLIM5-205ENST00000380180 MYH15Q9Y2K3 1946 aa23.3■■□□□ 1.32
PDLIM5-205ENST00000380180 COL11A2P13942 1736 aaPredicted RBP23.29■■□□□ 1.32
PDLIM5-205ENST00000380180 FIBPO43427 364 aa23.29■■□□□ 1.32
PDLIM5-205ENST00000380180 TMEM67Q5HYA8 995 aa23.29■■□□□ 1.32
PDLIM5-205ENST00000380180 LY9Q9HBG7 655 aa23.29■■□□□ 1.32
PDLIM5-205ENST00000380180 RBM27Q9P2N5 1060 aaKnown RBP23.29■■□□□ 1.32
PDLIM5-205ENST00000380180 FDPSP14324 419 aaKnown RBP23.28■■□□□ 1.32
PDLIM5-205ENST00000380180 IL1R1P14778 569 aa23.28■■□□□ 1.32
PDLIM5-205ENST00000380180 NPR1P16066 1061 aa23.28■■□□□ 1.32
PDLIM5-205ENST00000380180 PDE6BP35913 854 aa23.28■■□□□ 1.32
PDLIM5-205ENST00000380180 FAM173BQ6P4H8 233 aa23.28■■□□□ 1.32
PDLIM5-205ENST00000380180 GIMAP6Q6P9H5 292 aa23.28■■□□□ 1.32
PDLIM5-205ENST00000380180 ATP6V0A2Q9Y487 856 aa23.28■■□□□ 1.32
PDLIM5-205ENST00000380180 C6orf229H3BNL8 230 aa23.28■■□□□ 1.32
PDLIM5-205ENST00000380180 SMIM22K7EJ46 135 aa23.28■■□□□ 1.32
PDLIM5-205ENST00000380180 IFIT3O14879 490 aaKnown RBP23.28■■□□□ 1.32
PDLIM5-205ENST00000380180 EZH2Q15910 746 aaKnown RBP23.28■■□□□ 1.32
PDLIM5-205ENST00000380180 SGMS1Q86VZ5 419 aa23.28■■□□□ 1.32
PDLIM5-205ENST00000380180 CRNKL1Q9BZJ0 848 aaKnown RBP23.28■■□□□ 1.32
PDLIM5-205ENST00000380180 IGSF3O75054 1194 aa23.27■■□□□ 1.32
PDLIM5-205ENST00000380180 LIFRP42702 1097 aa23.27■■□□□ 1.32
PDLIM5-205ENST00000380180 EN1Q05925 392 aaPredicted RBP23.27■■□□□ 1.32
PDLIM5-205ENST00000380180 GRIK5Q16478 980 aa23.27■■□□□ 1.32
PDLIM5-205ENST00000380180 L1TD1Q5T7N2 865 aaKnown RBP23.27■■□□□ 1.32
PDLIM5-205ENST00000380180 CTR9Q6PD62 1173 aa23.27■■□□□ 1.32
PDLIM5-205ENST00000380180 APOA5Q6Q788 366 aa23.27■■□□□ 1.32
PDLIM5-205ENST00000380180 GAS2L3Q86XJ1 694 aa23.27■■□□□ 1.32
PDLIM5-205ENST00000380180 CYP2D7A0A087X1C5 515 aa23.26■■□□□ 1.31
PDLIM5-205ENST00000380180 ZSCAN23Q3MJ62 389 aa23.26■■□□□ 1.31
PDLIM5-205ENST00000380180 NFXL1Q6ZNB6 911 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms