RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 ZNF569Q5MCW4 686 aa13.01□□□□□ -0.33
SMAD9-202ENST00000379826 MYSM1Q5VVJ2 828 aa13.01□□□□□ -0.33
SMAD9-202ENST00000379826 FBXO38Q6PIJ6 1188 aa13.01□□□□□ -0.33
SMAD9-202ENST00000379826 DHX40Q8IX18 779 aaKnown RBP13.01□□□□□ -0.33
SMAD9-202ENST00000379826 FAM89AQ96GI7 184 aa13.01□□□□□ -0.33
SMAD9-202ENST00000379826 CTDSPL2Q05D32 466 aa13.01□□□□□ -0.33
SMAD9-202ENST00000379826 TXLNBQ8N3L3 684 aa13.01□□□□□ -0.33
SMAD9-202ENST00000379826 ZNHIT6Q9NWK9 470 aaKnown RBP13.01□□□□□ -0.33
SMAD9-202ENST00000379826 TMEM131LA2VDJ0 1609 aa13.01□□□□□ -0.33
SMAD9-202ENST00000379826 PHACTR2O75167 634 aa13□□□□□ -0.33
SMAD9-202ENST00000379826 DESI2Q9BSY9 194 aa13□□□□□ -0.33
SMAD9-202ENST00000379826 VGLL3A8MV65 326 aa13□□□□□ -0.33
SMAD9-202ENST00000379826 GPAA1O43292 621 aa13□□□□□ -0.33
SMAD9-202ENST00000379826 A1BGP04217 495 aa13□□□□□ -0.33
SMAD9-202ENST00000379826 CMTR1Q8N1G2 835 aaKnown RBP13□□□□□ -0.33
SMAD9-202ENST00000379826 SETQ01105 290 aaPredicted RBP13□□□□□ -0.33
SMAD9-202ENST00000379826 WTAPQ15007 396 aa13□□□□□ -0.33
SMAD9-202ENST00000379826 TTF1Q15361 905 aaPredicted RBP13□□□□□ -0.33
SMAD9-202ENST00000379826 RTN1Q16799 776 aa13□□□□□ -0.33
SMAD9-202ENST00000379826 RRAGBQ5VZM2 374 aa13□□□□□ -0.33
SMAD9-202ENST00000379826 KCNJ14Q9UNX9 436 aa13□□□□□ -0.33
SMAD9-202ENST00000379826 PLEKHG1Q9ULL1 1385 aa13□□□□□ -0.33
SMAD9-202ENST00000379826 CCDC175P0C221 793 aa13□□□□□ -0.33
SMAD9-202ENST00000379826 ST5P78524 1137 aa13□□□□□ -0.33
SMAD9-202ENST00000379826 LONRF3Q496Y0 759 aa13□□□□□ -0.33
SMAD9-202ENST00000379826 KRT40Q6A162 431 aa13□□□□□ -0.33
SMAD9-202ENST00000379826 ITSN1Q15811 1721 aa13□□□□□ -0.33
SMAD9-202ENST00000379826 MAGEB6Q8N7X4 407 aa12.99□□□□□ -0.33
SMAD9-202ENST00000379826 MIGA1Q8NAN2 632 aa12.99□□□□□ -0.33
SMAD9-202ENST00000379826 SRRTQ9BXP5 876 aaKnown RBP12.99□□□□□ -0.33
SMAD9-202ENST00000379826 PUS3Q9BZE2 481 aaKnown RBP12.99□□□□□ -0.33
SMAD9-202ENST00000379826 DEF6Q9H4E7 631 aa12.99□□□□□ -0.33
SMAD9-202ENST00000379826 SLC4A4Q9Y6R1 1079 aa12.99□□□□□ -0.33
SMAD9-202ENST00000379826 SETD1BQ9UPS6 1966 aaKnown RBP12.99□□□□□ -0.33
SMAD9-202ENST00000379826 OVOS2A0A0J9YW53 1432 aa12.99□□□□□ -0.33
SMAD9-202ENST00000379826 OVOS2Q6IE36 1432 aa12.99□□□□□ -0.33
SMAD9-202ENST00000379826 MYO5BQ9ULV0 1848 aa12.99□□□□□ -0.33
SMAD9-202ENST00000379826 POLR2DO15514 142 aaKnown RBP12.99□□□□□ -0.33
SMAD9-202ENST00000379826 ZNF827Q17R98 1081 aa12.99□□□□□ -0.33
SMAD9-202ENST00000379826 CCDC191Q8NCU4 936 aa12.99□□□□□ -0.33
SMAD9-202ENST00000379826 SIGLEC1Q9BZZ2 1709 aa12.99□□□□□ -0.33
SMAD9-202ENST00000379826 ANKRD26Q9UPS8 1709 aa12.99□□□□□ -0.33
SMAD9-202ENST00000379826 HSPA1LP34931 641 aa12.99□□□□□ -0.33
SMAD9-202ENST00000379826 CCT6AP40227 531 aaKnown RBP12.99□□□□□ -0.33
SMAD9-202ENST00000379826 CABP5Q9NP86 173 aa12.99□□□□□ -0.33
SMAD9-202ENST00000379826 N4BP3O15049 544 aa12.99□□□□□ -0.33
SMAD9-202ENST00000379826 OAS2P29728 719 aaKnown RBP12.99□□□□□ -0.33
SMAD9-202ENST00000379826 ZNF274Q96GC6 653 aaPredicted RBP12.99□□□□□ -0.33
SMAD9-202ENST00000379826 SLC5A1P13866 664 aa12.98□□□□□ -0.33
SMAD9-202ENST00000379826 DNA2P51530 1060 aa12.98□□□□□ -0.33
SMAD9-202ENST00000379826 PTPN12Q05209 780 aaKnown RBP12.98□□□□□ -0.33
SMAD9-202ENST00000379826 NEK11Q8NG66 645 aa12.98□□□□□ -0.33
SMAD9-202ENST00000379826 ST7Q9NRC1 585 aa12.98□□□□□ -0.33
SMAD9-202ENST00000379826 IGKV5-2P06315 115 aa12.98□□□□□ -0.33
SMAD9-202ENST00000379826 ADD1P35611 737 aaKnown RBP12.98□□□□□ -0.33
SMAD9-202ENST00000379826 KMT5BQ4FZB7 885 aa12.98□□□□□ -0.33
SMAD9-202ENST00000379826 CCDC181Q5TID7 509 aa12.98□□□□□ -0.33
SMAD9-202ENST00000379826 TANGO6Q9C0B7 1094 aa12.98□□□□□ -0.33
SMAD9-202ENST00000379826 FANCLQ9NW38 375 aa12.98□□□□□ -0.33
SMAD9-202ENST00000379826 ADORA1P30542 326 aa12.98□□□□□ -0.33
SMAD9-202ENST00000379826 TTLL7Q6ZT98 887 aa12.98□□□□□ -0.33
SMAD9-202ENST00000379826 CAPZA3Q96KX2 299 aa12.98□□□□□ -0.33
SMAD9-202ENST00000379826 RCOR1Q9UKL0 485 aa12.98□□□□□ -0.33
SMAD9-202ENST00000379826 COBLO75128 1261 aa12.98□□□□□ -0.33
SMAD9-202ENST00000379826 NLRP5P59047 1200 aa12.98□□□□□ -0.33
SMAD9-202ENST00000379826 SMARCC1Q92922 1105 aaPredicted RBP12.98□□□□□ -0.33
SMAD9-202ENST00000379826 DCAF5Q96JK2 942 aa12.98□□□□□ -0.33
SMAD9-202ENST00000379826 MAST3O60307 1309 aa12.98□□□□□ -0.33
SMAD9-202ENST00000379826 NF2P35240 595 aa12.97□□□□□ -0.33
SMAD9-202ENST00000379826 CTNND2Q9UQB3 1225 aa12.97□□□□□ -0.33
SMAD9-202ENST00000379826 CCDC196A0A1B0GTZ2 297 aa12.97□□□□□ -0.33
SMAD9-202ENST00000379826 YEATS4O95619 227 aa12.97□□□□□ -0.33
SMAD9-202ENST00000379826 STIM1Q13586 685 aa12.97□□□□□ -0.33
SMAD9-202ENST00000379826 JDP2Q8WYK2 163 aa12.97□□□□□ -0.33
SMAD9-202ENST00000379826 FUCA2Q9BTY2 467 aa12.97□□□□□ -0.33
SMAD9-202ENST00000379826 RTEL1Q9NZ71 1219 aa12.97□□□□□ -0.33
SMAD9-202ENST00000379826 USP31Q70CQ4 1352 aa12.97□□□□□ -0.33
SMAD9-202ENST00000379826 ATP1A3P13637 1013 aa12.97□□□□□ -0.33
SMAD9-202ENST00000379826 ZSCAN20P17040 1043 aaPredicted RBP12.97□□□□□ -0.33
SMAD9-202ENST00000379826 ARMT1Q9H993 441 aa12.97□□□□□ -0.33
SMAD9-202ENST00000379826 KNDC1Q76NI1 1749 aa12.97□□□□□ -0.33
SMAD9-202ENST00000379826 AIFM3Q96NN9 605 aa12.97□□□□□ -0.33
SMAD9-202ENST00000379826 hCG_1642624A0A1W2PR95 340 aa12.97□□□□□ -0.33
SMAD9-202ENST00000379826 CTAGE9A4FU28 777 aa12.97□□□□□ -0.33
SMAD9-202ENST00000379826 FGAP02671 866 aa12.97□□□□□ -0.33
SMAD9-202ENST00000379826 ST3GAL1Q11201 340 aa12.97□□□□□ -0.33
SMAD9-202ENST00000379826 ANKRD7Q92527 254 aa12.97□□□□□ -0.33
SMAD9-202ENST00000379826 ANGEL1Q9UNK9 670 aaKnown RBP12.97□□□□□ -0.33
SMAD9-202ENST00000379826 PPP2R2CQ9Y2T4 447 aa12.97□□□□□ -0.33
SMAD9-202ENST00000379826 AKR1B15C9JRZ8 316 aaPredicted RBP12.96□□□□□ -0.33
SMAD9-202ENST00000379826 TUBB4AP04350 444 aa12.96□□□□□ -0.33
SMAD9-202ENST00000379826 IGHMBP2P38935 993 aaKnown RBP12.96□□□□□ -0.33
SMAD9-202ENST00000379826 MATR3P43243 847 aaKnown RBP eCLIP12.96□□□□□ -0.33
SMAD9-202ENST00000379826 COPRSQ9NQ92 184 aa12.96□□□□□ -0.33
SMAD9-202ENST00000379826 BIN2Q9UBW5 565 aaPredicted RBP12.96□□□□□ -0.33
SMAD9-202ENST00000379826 SERTAD1Q9UHV2 236 aa12.96□□□□□ -0.33
SMAD9-202ENST00000379826 NFE2L3Q9Y4A8 694 aa12.96□□□□□ -0.33
SMAD9-202ENST00000379826 A0A0G2JLW4 131 aa12.96□□□□□ -0.33
SMAD9-202ENST00000379826 CTAGE15A4D2H0 777 aa12.96□□□□□ -0.33
SMAD9-202ENST00000379826 CTAGE8P0CG41 777 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms