RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 JMYQ8N9B5 988 aa12.28□□□□□ -0.44
POLR2J3-201ENST00000379340 SPATA32Q96LK8 384 aa12.28□□□□□ -0.44
POLR2J3-201ENST00000379340 SETDB2Q96T68 719 aa12.28□□□□□ -0.44
POLR2J3-201ENST00000379340 MTA3Q9BTC8 594 aa12.28□□□□□ -0.44
POLR2J3-201ENST00000379340 NACAP1Q9BZK3 213 aa12.28□□□□□ -0.44
POLR2J3-201ENST00000379340 CNNM2Q9H8M5 875 aa12.28□□□□□ -0.44
POLR2J3-201ENST00000379340 BCL2L12Q9HB09 334 aa12.28□□□□□ -0.44
POLR2J3-201ENST00000379340 RTCBQ9Y3I0 505 aaKnown RBP12.28□□□□□ -0.44
POLR2J3-201ENST00000379340 C4AP0C0L4 1744 aa12.28□□□□□ -0.44
POLR2J3-201ENST00000379340 PDS5AQ29RF7 1337 aaKnown RBP12.28□□□□□ -0.44
POLR2J3-201ENST00000379340 IGSF3O75054 1194 aa12.27□□□□□ -0.44
POLR2J3-201ENST00000379340 APPP05067 770 aa12.27□□□□□ -0.44
POLR2J3-201ENST00000379340 BCAMP50895 628 aa12.27□□□□□ -0.44
POLR2J3-201ENST00000379340 ANTXR2P58335 489 aa12.27□□□□□ -0.44
POLR2J3-201ENST00000379340 HS1BP3Q53T59 392 aa12.27□□□□□ -0.44
POLR2J3-201ENST00000379340 CAVIN4Q5BKX8 364 aa12.27□□□□□ -0.44
POLR2J3-201ENST00000379340 DDX11Q96FC9 970 aa12.27□□□□□ -0.44
POLR2J3-201ENST00000379340 ZNF396Q96N95 335 aaPredicted RBP12.27□□□□□ -0.44
POLR2J3-201ENST00000379340 NLRP3Q96P20 1036 aa12.27□□□□□ -0.44
POLR2J3-201ENST00000379340 ANKRD2Q9GZV1 360 aa12.27□□□□□ -0.44
POLR2J3-201ENST00000379340 NAPBQ9H115 298 aa12.27□□□□□ -0.44
POLR2J3-201ENST00000379340 DENND2AQ9ULE3 1009 aa12.27□□□□□ -0.44
POLR2J3-201ENST00000379340 BCS1LQ9Y276 419 aa12.27□□□□□ -0.44
POLR2J3-201ENST00000379340 KLF18A0A0U1RQI7 1052 aa12.26□□□□□ -0.45
POLR2J3-201ENST00000379340 GOLGA6L4A6NEF3 574 aa12.26□□□□□ -0.45
POLR2J3-201ENST00000379340 GNPATO15228 680 aa12.26□□□□□ -0.45
POLR2J3-201ENST00000379340 CDKL5O76039 1030 aa12.26□□□□□ -0.45
POLR2J3-201ENST00000379340 MBD4O95243 580 aa12.26□□□□□ -0.45
POLR2J3-201ENST00000379340 MMP10P09238 476 aa12.26□□□□□ -0.45
POLR2J3-201ENST00000379340 CCT2P78371 535 aaKnown RBP12.26□□□□□ -0.45
POLR2J3-201ENST00000379340 TPTE2Q6XPS3 522 aa12.26□□□□□ -0.45
POLR2J3-201ENST00000379340 NBPF5PQ86XG9 351 aaPredicted RBP12.26□□□□□ -0.45
POLR2J3-201ENST00000379340 IFNL3Q8IZI9 196 aa12.26□□□□□ -0.45
POLR2J3-201ENST00000379340 TNS4Q8IZW8 715 aa12.26□□□□□ -0.45
POLR2J3-201ENST00000379340 LEO1Q8WVC0 666 aaPredicted RBP12.26□□□□□ -0.45
POLR2J3-201ENST00000379340 PDLIM2Q96JY6 352 aa12.26□□□□□ -0.45
POLR2J3-201ENST00000379340 KRT23Q9C075 422 aa12.26□□□□□ -0.45
POLR2J3-201ENST00000379340 NAP1L2Q9ULW6 460 aaPredicted RBP12.26□□□□□ -0.45
POLR2J3-201ENST00000379340 ANGEL1Q9UNK9 670 aaKnown RBP12.26□□□□□ -0.45
POLR2J3-201ENST00000379340 MYH13Q9UKX3 1938 aa12.26□□□□□ -0.45
POLR2J3-201ENST00000379340 MAST2Q6P0Q8 1798 aa12.26□□□□□ -0.45
POLR2J3-201ENST00000379340 COL4A1P02462 1669 aa12.26□□□□□ -0.45
POLR2J3-201ENST00000379340 GOLGA8BA8MQT2 603 aa12.26□□□□□ -0.45
POLR2J3-201ENST00000379340 SH2B2O14492 632 aaPredicted RBP12.26□□□□□ -0.45
POLR2J3-201ENST00000379340 HMGB2P26583 209 aaKnown RBP12.26□□□□□ -0.45
POLR2J3-201ENST00000379340 CPLX2Q6PUV4 134 aaKnown RBP12.26□□□□□ -0.45
POLR2J3-201ENST00000379340 ARHGAP27Q6ZUM4 889 aa12.26□□□□□ -0.45
POLR2J3-201ENST00000379340 CHST3Q7LGC8 479 aa12.26□□□□□ -0.45
POLR2J3-201ENST00000379340 TBC1D10CQ8IV04 446 aa12.26□□□□□ -0.45
POLR2J3-201ENST00000379340 NBPF3Q9H094 633 aa12.26□□□□□ -0.45
POLR2J3-201ENST00000379340 DDX19AQ9NUU7 478 aaKnown RBP12.26□□□□□ -0.45
POLR2J3-201ENST00000379340 LRP2BPQ9P2M1 347 aa12.26□□□□□ -0.45
POLR2J3-201ENST00000379340 MINPP1Q9UNW1 487 aa12.26□□□□□ -0.45
POLR2J3-201ENST00000379340 KIF13BQ9NQT8 1826 aa12.26□□□□□ -0.45
POLR2J3-201ENST00000379340 CPLX1O14810 134 aa12.25□□□□□ -0.45
POLR2J3-201ENST00000379340 PRELPP51888 382 aa12.25□□□□□ -0.45
POLR2J3-201ENST00000379340 RBM46Q8TBY0 533 aaKnown RBP12.25□□□□□ -0.45
POLR2J3-201ENST00000379340 RNF41Q9H4P4 317 aaPredicted RBP12.25□□□□□ -0.45
POLR2J3-201ENST00000379340 GSG1L2A8MUP6 293 aa12.24□□□□□ -0.45
POLR2J3-201ENST00000379340 DPEP1P16444 411 aa12.24□□□□□ -0.45
POLR2J3-201ENST00000379340 LIFRP42702 1097 aa12.24□□□□□ -0.45
POLR2J3-201ENST00000379340 RPS8P62241 208 aaKnown RBP12.24□□□□□ -0.45
POLR2J3-201ENST00000379340 AKNAD1Q5T1N1 836 aa12.24□□□□□ -0.45
POLR2J3-201ENST00000379340 BICDL1Q6ZP65 573 aa12.24□□□□□ -0.45
POLR2J3-201ENST00000379340 C3orf67Q6ZVT6 689 aa12.24□□□□□ -0.45
POLR2J3-201ENST00000379340 SGMS1Q86VZ5 419 aa12.24□□□□□ -0.45
POLR2J3-201ENST00000379340 STAG1Q8WVM7 1258 aa12.24□□□□□ -0.45
POLR2J3-201ENST00000379340 ARMT1Q9H993 441 aa12.24□□□□□ -0.45
POLR2J3-201ENST00000379340 NCOA5Q9HCD5 579 aaKnown RBP12.24□□□□□ -0.45
POLR2J3-201ENST00000379340 EPB41L4AQ9HCS5 686 aaPredicted RBP12.24□□□□□ -0.45
POLR2J3-201ENST00000379340 HPS5Q9UPZ3 1129 aa12.24□□□□□ -0.45
POLR2J3-201ENST00000379340 SLC4A4Q9Y6R1 1079 aa12.24□□□□□ -0.45
POLR2J3-201ENST00000379340 CACNA1SQ13698 1873 aa12.24□□□□□ -0.45
POLR2J3-201ENST00000379340 NID2Q14112 1375 aa12.24□□□□□ -0.45
POLR2J3-201ENST00000379340 C10orf71Q711Q0 1435 aa12.23□□□□□ -0.45
POLR2J3-201ENST00000379340 SNAP23O00161 211 aa12.23□□□□□ -0.45
POLR2J3-201ENST00000379340 DTNBO60941 627 aa12.23□□□□□ -0.45
POLR2J3-201ENST00000379340 FDPSP14324 419 aaKnown RBP12.23□□□□□ -0.45
POLR2J3-201ENST00000379340 TDO2P48775 406 aa12.23□□□□□ -0.45
POLR2J3-201ENST00000379340 RCAN1P53805 252 aa12.23□□□□□ -0.45
POLR2J3-201ENST00000379340 C9orf131Q5VYM1 1079 aa12.23□□□□□ -0.45
POLR2J3-201ENST00000379340 BRAPQ7Z569 592 aa12.23□□□□□ -0.45
POLR2J3-201ENST00000379340 FBXO33Q7Z6M2 555 aa12.23□□□□□ -0.45
POLR2J3-201ENST00000379340 VPS37DQ86XT2 251 aa12.23□□□□□ -0.45
POLR2J3-201ENST00000379340 CELF1Q92879 486 aaKnown RBP12.23□□□□□ -0.45
POLR2J3-201ENST00000379340 NUP62CLQ9H1M0 184 aa12.23□□□□□ -0.45
POLR2J3-201ENST00000379340 SRP68Q9UHB9 627 aaKnown RBP12.23□□□□□ -0.45
POLR2J3-201ENST00000379340 RCOR1Q9UKL0 485 aa12.23□□□□□ -0.45
POLR2J3-201ENST00000379340 TAF1P21675 1872 aa12.23□□□□□ -0.45
POLR2J3-201ENST00000379340 CCDC192P0DO97 292 aa12.22□□□□□ -0.45
POLR2J3-201ENST00000379340 PCP11498 1178 aaKnown RBP12.22□□□□□ -0.45
POLR2J3-201ENST00000379340 CYP7A1P22680 504 aa12.22□□□□□ -0.45
POLR2J3-201ENST00000379340 RFC4P35249 363 aa12.22□□□□□ -0.45
POLR2J3-201ENST00000379340 METAP2P50579 478 aaKnown RBP eCLIP12.22□□□□□ -0.45
POLR2J3-201ENST00000379340 SART3Q15020 963 aaKnown RBP12.22□□□□□ -0.45
POLR2J3-201ENST00000379340 TRAPPC3LQ5T215 181 aa12.22□□□□□ -0.45
POLR2J3-201ENST00000379340 FAM173BQ6P4H8 233 aa12.22□□□□□ -0.45
POLR2J3-201ENST00000379340 MFSD6Q6ZSS7 791 aa12.22□□□□□ -0.45
POLR2J3-201ENST00000379340 CYB5R4Q7L1T6 521 aa12.22□□□□□ -0.45
POLR2J3-201ENST00000379340 LCORLQ8N3X6 602 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms