RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 CPLX2Q6PUV4 134 aaKnown RBP9.4□□□□□ -0.9
PTPRR-203ENST00000378778 NUTM2AQ8IVF1 878 aaPredicted RBP9.4□□□□□ -0.9
PTPRR-203ENST00000378778 CLIC4Q9Y696 253 aa9.4□□□□□ -0.9
PTPRR-203ENST00000378778 KIF5CO60282 957 aa9.4□□□□□ -0.9
PTPRR-203ENST00000378778 FECHP22830 423 aa9.4□□□□□ -0.9
PTPRR-203ENST00000378778 ERCC5P28715 1186 aaPredicted RBP9.4□□□□□ -0.9
PTPRR-203ENST00000378778 IRX3P78415 501 aaPredicted RBP9.4□□□□□ -0.9
PTPRR-203ENST00000378778 ST5P78524 1137 aa9.4□□□□□ -0.9
PTPRR-203ENST00000378778 COL9A3Q14050 684 aaPredicted RBP9.4□□□□□ -0.9
PTPRR-203ENST00000378778 CWF19L2Q2TBE0 894 aaKnown RBP9.4□□□□□ -0.9
PTPRR-203ENST00000378778 HSP90B2PQ58FF3 399 aa9.4□□□□□ -0.9
PTPRR-203ENST00000378778 BEND6Q5SZJ8 279 aaPredicted RBP9.4□□□□□ -0.9
PTPRR-203ENST00000378778 SLC26A8Q96RN1 970 aa9.4□□□□□ -0.9
PTPRR-203ENST00000378778 TTF2Q9UNY4 1162 aaKnown RBP9.4□□□□□ -0.9
PTPRR-203ENST00000378778 SCN11AQ9UI33 1791 aa9.4□□□□□ -0.91
PTPRR-203ENST00000378778 RNF113AO15541 343 aaKnown RBP9.39□□□□□ -0.91
PTPRR-203ENST00000378778 SEC31AO94979 1220 aaKnown RBP9.39□□□□□ -0.91
PTPRR-203ENST00000378778 IGKV5-2P06315 115 aa9.39□□□□□ -0.91
PTPRR-203ENST00000378778 ZNF18P17022 549 aa9.39□□□□□ -0.91
PTPRR-203ENST00000378778 PTPN12Q05209 780 aaKnown RBP9.39□□□□□ -0.91
PTPRR-203ENST00000378778 GNL2Q13823 731 aaKnown RBP9.39□□□□□ -0.91
PTPRR-203ENST00000378778 ICE2Q659A1 982 aa9.39□□□□□ -0.91
PTPRR-203ENST00000378778 RIC3Q7Z5B4 369 aa9.39□□□□□ -0.91
PTPRR-203ENST00000378778 RUBCNQ92622 972 aa9.39□□□□□ -0.91
PTPRR-203ENST00000378778 CTAGE1Q96RT6 745 aa9.39□□□□□ -0.91
PTPRR-203ENST00000378778 FTOQ9C0B1 505 aaKnown RBP eCLIP9.39□□□□□ -0.91
PTPRR-203ENST00000378778 LGR6Q9HBX8 967 aa9.39□□□□□ -0.91
PTPRR-203ENST00000378778 PAG1Q9NWQ8 432 aa9.39□□□□□ -0.91
PTPRR-203ENST00000378778 RSPH14Q9UHP6 348 aa9.39□□□□□ -0.91
PTPRR-203ENST00000378778 KDM6AO15550 1401 aaPredicted RBP9.39□□□□□ -0.91
PTPRR-203ENST00000378778 KIF1AQ12756 1690 aa9.39□□□□□ -0.91
PTPRR-203ENST00000378778 CPDO75976 1380 aa9.39□□□□□ -0.91
PTPRR-203ENST00000378778 A6NNZ2 444 aa9.39□□□□□ -0.91
PTPRR-203ENST00000378778 SOX12O15370 315 aa9.39□□□□□ -0.91
PTPRR-203ENST00000378778 HSPD1P10809 573 aaKnown RBP9.39□□□□□ -0.91
PTPRR-203ENST00000378778 IMMTQ16891 758 aaKnown RBP9.39□□□□□ -0.91
PTPRR-203ENST00000378778 TUBB8Q3ZCM7 444 aa9.39□□□□□ -0.91
PTPRR-203ENST00000378778 MAP9Q49MG5 647 aa9.39□□□□□ -0.91
PTPRR-203ENST00000378778 WDR93Q6P2C0 686 aa9.39□□□□□ -0.91
PTPRR-203ENST00000378778 TC2NQ8N9U0 490 aa9.39□□□□□ -0.91
PTPRR-203ENST00000378778 RPGRIP1Q96KN7 1286 aa9.39□□□□□ -0.91
PTPRR-203ENST00000378778 L1RE1Q9UN81 338 aa9.39□□□□□ -0.91
PTPRR-203ENST00000378778 LAMB4A4D0S4 1761 aa9.39□□□□□ -0.91
PTPRR-203ENST00000378778 ARFGEF2Q9Y6D5 1785 aa9.39□□□□□ -0.91
PTPRR-203ENST00000378778 STK36Q9NRP7 1315 aa9.39□□□□□ -0.91
PTPRR-203ENST00000378778 HOXD11P31277 338 aaPredicted RBP9.38□□□□□ -0.91
PTPRR-203ENST00000378778 LMAN1P49257 510 aa9.38□□□□□ -0.91
PTPRR-203ENST00000378778 AARSP49588 968 aaKnown RBP eCLIP9.38□□□□□ -0.91
PTPRR-203ENST00000378778 ZNF579Q8NAF0 562 aaKnown RBP9.38□□□□□ -0.91
PTPRR-203ENST00000378778 AMOTL2Q9Y2J4 779 aa9.38□□□□□ -0.91
PTPRR-203ENST00000378778 ITIH6Q6UXX5 1313 aa9.38□□□□□ -0.91
PTPRR-203ENST00000378778 AKR1B15C9JRZ8 316 aaPredicted RBP9.38□□□□□ -0.91
PTPRR-203ENST00000378778 CPLX1O14810 134 aa9.38□□□□□ -0.91
PTPRR-203ENST00000378778 CCT2P78371 535 aaKnown RBP9.38□□□□□ -0.91
PTPRR-203ENST00000378778 TFCP2Q12800 502 aa9.38□□□□□ -0.91
PTPRR-203ENST00000378778 TTC31Q49AM3 519 aaPredicted RBP9.38□□□□□ -0.91
PTPRR-203ENST00000378778 SUGP1Q8IWZ8 645 aaKnown RBP9.38□□□□□ -0.91
PTPRR-203ENST00000378778 EFCAB13Q8IY85 973 aa9.38□□□□□ -0.91
PTPRR-203ENST00000378778 ABTB2Q8N961 1025 aa9.38□□□□□ -0.91
PTPRR-203ENST00000378778 CCDC12Q8WUD4 166 aaPredicted RBP9.38□□□□□ -0.91
PTPRR-203ENST00000378778 WASF1Q92558 559 aa9.38□□□□□ -0.91
PTPRR-203ENST00000378778 SIL1Q9H173 461 aa9.38□□□□□ -0.91
PTPRR-203ENST00000378778 RAI14Q9P0K7 980 aa9.38□□□□□ -0.91
PTPRR-203ENST00000378778 C5P01031 1676 aa9.38□□□□□ -0.91
PTPRR-203ENST00000378778 ZMYM6O95789 1325 aa9.38□□□□□ -0.91
PTPRR-203ENST00000378778 MYH7P12883 1935 aa9.37□□□□□ -0.91
PTPRR-203ENST00000378778 A0A1B0GTH6 734 aa9.37□□□□□ -0.91
PTPRR-203ENST00000378778 CIAO1O76071 339 aa9.37□□□□□ -0.91
PTPRR-203ENST00000378778 ATP1A3P13637 1013 aa9.37□□□□□ -0.91
PTPRR-203ENST00000378778 IL15P40933 162 aaPredicted RBP9.37□□□□□ -0.91
PTPRR-203ENST00000378778 CORO7P57737 925 aa9.37□□□□□ -0.91
PTPRR-203ENST00000378778 TRIM14Q14142 442 aa9.37□□□□□ -0.91
PTPRR-203ENST00000378778 PDIA6Q15084 440 aa9.37□□□□□ -0.91
PTPRR-203ENST00000378778 PTPAQ15257 358 aa9.37□□□□□ -0.91
PTPRR-203ENST00000378778 TAF7LQ5H9L4 462 aa9.37□□□□□ -0.91
PTPRR-203ENST00000378778 RASGRP2Q7LDG7 609 aa9.37□□□□□ -0.91
PTPRR-203ENST00000378778 RPAINQ86UA6 219 aa9.37□□□□□ -0.91
PTPRR-203ENST00000378778 NFATC2IPQ8NCF5 419 aa9.37□□□□□ -0.91
PTPRR-203ENST00000378778 NCOA7Q8NI08 942 aa9.37□□□□□ -0.91
PTPRR-203ENST00000378778 WDR24Q96S15 920 aa9.37□□□□□ -0.91
PTPRR-203ENST00000378778 RGPD2P0DJD1 1756 aa9.37□□□□□ -0.91
PTPRR-203ENST00000378778 CTAGE9A4FU28 777 aa9.37□□□□□ -0.91
PTPRR-203ENST00000378778 PPFIA4O75335 1185 aa9.37□□□□□ -0.91
PTPRR-203ENST00000378778 EIF5P55010 431 aaKnown RBP9.37□□□□□ -0.91
PTPRR-203ENST00000378778 NBPF6Q5VWK0 638 aa9.37□□□□□ -0.91
PTPRR-203ENST00000378778 CNGA4Q8IV77 575 aa9.37□□□□□ -0.91
PTPRR-203ENST00000378778 MB21D2Q8IYB1 491 aaPredicted RBP9.37□□□□□ -0.91
PTPRR-203ENST00000378778 DHX58Q96C10 678 aa9.37□□□□□ -0.91
PTPRR-203ENST00000378778 NBPF4Q96M43 638 aa9.37□□□□□ -0.91
PTPRR-203ENST00000378778 NID2Q14112 1375 aa9.37□□□□□ -0.91
PTPRR-203ENST00000378778 NWD2Q9ULI1 1742 aa9.37□□□□□ -0.91
PTPRR-203ENST00000378778 FANCGO15287 622 aa9.36□□□□□ -0.91
PTPRR-203ENST00000378778 KCNQ3O43525 872 aa9.36□□□□□ -0.91
PTPRR-203ENST00000378778 PIP4K2AP48426 406 aaPredicted RBP9.36□□□□□ -0.91
PTPRR-203ENST00000378778 SARSP49591 514 aaKnown RBP9.36□□□□□ -0.91
PTPRR-203ENST00000378778 NR1I3Q14994 352 aa9.36□□□□□ -0.91
PTPRR-203ENST00000378778 CNNM3Q8NE01 707 aa9.36□□□□□ -0.91
PTPRR-203ENST00000378778 DPF2Q92785 391 aa9.36□□□□□ -0.91
PTPRR-203ENST00000378778 ANKZF1Q9H8Y5 726 aa9.36□□□□□ -0.91
PTPRR-203ENST00000378778 FANCLQ9NW38 375 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms