RNA–Protein interactions for RNA: ENST00000378757.6

OPTN-205, Transcript of optineurin, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene OPTN, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-205ENST00000378757 TPM2P07951 284 aa11.13□□□□□ -0.63
OPTN-205ENST00000378757 TPD52L1Q16890 204 aaPredicted RBP11.13□□□□□ -0.63
OPTN-205ENST00000378757 CCDC152Q4G0S7 254 aa11.13□□□□□ -0.63
OPTN-205ENST00000378757 LCORLQ8N3X6 602 aa11.13□□□□□ -0.63
OPTN-205ENST00000378757 LLPHQ9BRT6 129 aaKnown RBP11.13□□□□□ -0.63
OPTN-205ENST00000378757 UBAC1Q9BSL1 405 aa11.13□□□□□ -0.63
OPTN-205ENST00000378757 NACAP1Q9BZK3 213 aa11.13□□□□□ -0.63
OPTN-205ENST00000378757 KIF28PB7ZC32 967 aa11.13□□□□□ -0.63
OPTN-205ENST00000378757 FOXP2O15409 715 aa11.13□□□□□ -0.63
OPTN-205ENST00000378757 LMOD1P29536 600 aaPredicted RBP11.13□□□□□ -0.63
OPTN-205ENST00000378757 AKAP17AQ02040 695 aaKnown RBP11.13□□□□□ -0.63
OPTN-205ENST00000378757 NAA16Q6N069 864 aaPredicted RBP11.13□□□□□ -0.63
OPTN-205ENST00000378757 FBXO18Q8NFZ0 1043 aa11.13□□□□□ -0.63
OPTN-205ENST00000378757 ZSWIM5Q9P217 1185 aa11.13□□□□□ -0.63
OPTN-205ENST00000378757 NEDD4P46934 1319 aa11.13□□□□□ -0.63
OPTN-205ENST00000378757 CDC27P30260 824 aa11.12□□□□□ -0.63
OPTN-205ENST00000378757 CEP57L1Q8IYX8 460 aa11.12□□□□□ -0.63
OPTN-205ENST00000378757 IFNL3Q8IZI9 196 aa11.12□□□□□ -0.63
OPTN-205ENST00000378757 VSIG10Q8N0Z9 540 aa11.12□□□□□ -0.63
OPTN-205ENST00000378757 SMARCC2Q8TAQ2 1214 aa11.12□□□□□ -0.63
OPTN-205ENST00000378757 FUCA2Q9BTY2 467 aa11.12□□□□□ -0.63
OPTN-205ENST00000378757 SLC3A2P08195 630 aaKnown RBP11.12□□□□□ -0.63
OPTN-205ENST00000378757 FAM160A1Q05DH4 1040 aa11.12□□□□□ -0.63
OPTN-205ENST00000378757 CHRNDQ07001 517 aa11.12□□□□□ -0.63
OPTN-205ENST00000378757 ITPK1Q13572 414 aa11.12□□□□□ -0.63
OPTN-205ENST00000378757 MYSM1Q5VVJ2 828 aa11.12□□□□□ -0.63
OPTN-205ENST00000378757 KRT40Q6A162 431 aa11.12□□□□□ -0.63
OPTN-205ENST00000378757 ELP1O95163 1332 aa11.12□□□□□ -0.63
OPTN-205ENST00000378757 UQCRFS1P1P0C7P4 283 aa11.12□□□□□ -0.63
OPTN-205ENST00000378757 PTF1AQ7RTS3 328 aa11.12□□□□□ -0.63
OPTN-205ENST00000378757 MB21D2Q8IYB1 491 aaPredicted RBP11.12□□□□□ -0.63
OPTN-205ENST00000378757 PALLDQ8WX93 1383 aa11.12□□□□□ -0.63
OPTN-205ENST00000378757 IL6STP40189 918 aaPredicted RBP11.11□□□□□ -0.63
OPTN-205ENST00000378757 TRIM28Q13263 835 aaKnown RBP11.11□□□□□ -0.63
OPTN-205ENST00000378757 SART3Q15020 963 aaKnown RBP11.11□□□□□ -0.63
OPTN-205ENST00000378757 SAFBQ15424 915 aaKnown RBP eCLIP11.11□□□□□ -0.63
OPTN-205ENST00000378757 STX1AQ16623 288 aa11.11□□□□□ -0.63
OPTN-205ENST00000378757 APOA5Q6Q788 366 aa11.11□□□□□ -0.63
OPTN-205ENST00000378757 ILDR1Q86SU0 546 aaPredicted RBP11.11□□□□□ -0.63
OPTN-205ENST00000378757 RCOR1Q9UKL0 485 aa11.11□□□□□ -0.63
OPTN-205ENST00000378757 NRAPQ86VF7 1730 aa11.11□□□□□ -0.63
OPTN-205ENST00000378757 PDIA4P13667 645 aaKnown RBP11.11□□□□□ -0.63
OPTN-205ENST00000378757 ERFEQ4G0M1 354 aa11.11□□□□□ -0.63
OPTN-205ENST00000378757 STRBPQ96SI9 672 aaKnown RBP11.11□□□□□ -0.63
OPTN-205ENST00000378757 KCNF1Q9H3M0 494 aa11.11□□□□□ -0.63
OPTN-205ENST00000378757 SRP68Q9UHB9 627 aaKnown RBP11.11□□□□□ -0.63
OPTN-205ENST00000378757 HPS5Q9UPZ3 1129 aa11.11□□□□□ -0.63
OPTN-205ENST00000378757 BTBD18B2RXH4 712 aa11.11□□□□□ -0.63
OPTN-205ENST00000378757 ZNF75DP51815 510 aa11.11□□□□□ -0.63
OPTN-205ENST00000378757 DYNLL1P63167 89 aaKnown RBP11.11□□□□□ -0.63
OPTN-205ENST00000378757 DPCR1Q3MIW9 517 aa11.11□□□□□ -0.63
OPTN-205ENST00000378757 ANO1Q5XXA6 986 aa11.11□□□□□ -0.63
OPTN-205ENST00000378757 MARCH10Q8NA82 808 aaPredicted RBP11.11□□□□□ -0.63
OPTN-205ENST00000378757 ANO10Q9NW15 660 aa11.11□□□□□ -0.63
OPTN-205ENST00000378757 ZNF202O95125 648 aa11.1□□□□□ -0.63
OPTN-205ENST00000378757 GUCY1A2P33402 732 aa11.1□□□□□ -0.63
OPTN-205ENST00000378757 SSRP1Q08945 709 aaKnown RBP11.1□□□□□ -0.63
OPTN-205ENST00000378757 WTAPQ15007 396 aa11.1□□□□□ -0.63
OPTN-205ENST00000378757 ANKRD18AQ8IVF6 992 aa11.1□□□□□ -0.63
OPTN-205ENST00000378757 TRIM22Q8IYM9 498 aa11.1□□□□□ -0.63
OPTN-205ENST00000378757 FAM177A1Q8N128 213 aaPredicted RBP11.1□□□□□ -0.63
OPTN-205ENST00000378757 DOT1LQ8TEK3 1739 aa11.1□□□□□ -0.63
OPTN-205ENST00000378757 SYKP43405 635 aa11.1□□□□□ -0.63
OPTN-205ENST00000378757 C3orf67Q6ZVT6 689 aa11.09□□□□□ -0.63
OPTN-205ENST00000378757 LINC00301Q8NCQ3 95 aa11.09□□□□□ -0.63
OPTN-205ENST00000378757 ALDH8A1Q9H2A2 487 aaPredicted RBP11.09□□□□□ -0.63
OPTN-205ENST00000378757 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.09□□□□□ -0.63
OPTN-205ENST00000378757 V9GYY5 206 aaPredicted RBP11.09□□□□□ -0.63
OPTN-205ENST00000378757 BAZ2BQ9UIF8 2168 aaKnown RBP11.09□□□□□ -0.63
OPTN-205ENST00000378757 CDKL5O76039 1030 aa11.09□□□□□ -0.63
OPTN-205ENST00000378757 NR5A1Q13285 461 aa11.09□□□□□ -0.63
OPTN-205ENST00000378757 CCDC144BQ3MJ40 725 aa11.09□□□□□ -0.63
OPTN-205ENST00000378757 CAVIN4Q5BKX8 364 aa11.09□□□□□ -0.63
OPTN-205ENST00000378757 NBPF5PQ86XG9 351 aaPredicted RBP11.09□□□□□ -0.63
OPTN-205ENST00000378757 NAT10Q9H0A0 1025 aaKnown RBP11.09□□□□□ -0.63
OPTN-205ENST00000378757 EPB41L4AQ9HCS5 686 aaPredicted RBP11.09□□□□□ -0.63
OPTN-205ENST00000378757 BCL9O00512 1426 aa11.09□□□□□ -0.63
OPTN-205ENST00000378757 PHLPP1O60346 1717 aa11.09□□□□□ -0.63
OPTN-205ENST00000378757 PATL2C9JE40 543 aaKnown RBP11.09□□□□□ -0.63
OPTN-205ENST00000378757 SERPINC1P01008 464 aa11.09□□□□□ -0.63
OPTN-205ENST00000378757 RTN1Q16799 776 aa11.09□□□□□ -0.63
OPTN-205ENST00000378757 KLHL10Q6JEL2 608 aa11.09□□□□□ -0.63
OPTN-205ENST00000378757 CACTINQ8WUQ7 758 aaKnown RBP11.09□□□□□ -0.63
OPTN-205ENST00000378757 NBPF3Q9H094 633 aa11.09□□□□□ -0.63
OPTN-205ENST00000378757 TMX1Q9H3N1 280 aa11.09□□□□□ -0.63
OPTN-205ENST00000378757 AATFQ9NY61 560 aaKnown RBP eCLIP11.09□□□□□ -0.63
OPTN-205ENST00000378757 GNPATO15228 680 aa11.08□□□□□ -0.64
OPTN-205ENST00000378757 PFKFB1P16118 471 aa11.08□□□□□ -0.64
OPTN-205ENST00000378757 PNOCQ13519 176 aa11.08□□□□□ -0.64
OPTN-205ENST00000378757 ZNF827Q17R98 1081 aa11.08□□□□□ -0.64
OPTN-205ENST00000378757 FAM47AQ5JRC9 791 aa11.08□□□□□ -0.64
OPTN-205ENST00000378757 TMC6Q7Z403 805 aa11.08□□□□□ -0.64
OPTN-205ENST00000378757 KCNG4Q8TDN1 519 aa11.08□□□□□ -0.64
OPTN-205ENST00000378757 GPR101Q96P66 508 aaPredicted RBP11.08□□□□□ -0.64
OPTN-205ENST00000378757 CDC5LQ99459 802 aaKnown RBP11.08□□□□□ -0.64
OPTN-205ENST00000378757 GNL3LQ9NVN8 582 aaKnown RBP11.08□□□□□ -0.64
OPTN-205ENST00000378757 IFNKQ9P0W0 207 aa11.08□□□□□ -0.64
OPTN-205ENST00000378757 ANKIB1Q9P2G1 1089 aa11.08□□□□□ -0.64
OPTN-205ENST00000378757 SKILP12757 684 aa11.08□□□□□ -0.64
OPTN-205ENST00000378757 CDK11BP21127 795 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms