RNA–Protein interactions for RNA: ENST00000378391.6

PRDM16-203, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRDM16, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-203ENST00000378391 NAP1L3Q99457 506 aaPredicted RBP16.35■□□□□ 0.21
PRDM16-203ENST00000378391 EYA1Q99502 592 aa16.35■□□□□ 0.21
PRDM16-203ENST00000378391 UTP14AQ9BVJ6 771 aaKnown RBP16.35■□□□□ 0.21
PRDM16-203ENST00000378391 MMRN2Q9H8L6 949 aa16.35■□□□□ 0.21
PRDM16-203ENST00000378391 RASAL2Q9UJF2 1139 aa16.35■□□□□ 0.21
PRDM16-203ENST00000378391 LUC7L2Q9Y383 392 aaKnown RBP16.35■□□□□ 0.21
PRDM16-203ENST00000378391 SETBP1Q9Y6X0 1596 aa16.35■□□□□ 0.21
PRDM16-203ENST00000378391 GNAT2P19087 354 aa16.35■□□□□ 0.21
PRDM16-203ENST00000378391 KARSQ15046 597 aaKnown RBP16.35■□□□□ 0.21
PRDM16-203ENST00000378391 VPS18Q9P253 973 aa16.35■□□□□ 0.21
PRDM16-203ENST00000378391 GLI2P10070 1586 aa16.35■□□□□ 0.21
PRDM16-203ENST00000378391 VAV2P52735 878 aa16.35■□□□□ 0.21
PRDM16-203ENST00000378391 ME3Q16798 604 aa16.35■□□□□ 0.21
PRDM16-203ENST00000378391 LEO1Q8WVC0 666 aaPredicted RBP16.35■□□□□ 0.21
PRDM16-203ENST00000378391 STMN4Q9H169 189 aaPredicted RBP16.35■□□□□ 0.21
PRDM16-203ENST00000378391 HDXQ7Z353 690 aa16.34■□□□□ 0.21
PRDM16-203ENST00000378391 KIAA1524Q8TCG1 905 aa16.34■□□□□ 0.21
PRDM16-203ENST00000378391 RPGRQ92834 1020 aaKnown RBP16.34■□□□□ 0.21
PRDM16-203ENST00000378391 BAG1Q99933 345 aaPredicted RBP16.34■□□□□ 0.21
PRDM16-203ENST00000378391 CCDC77Q9BR77 488 aa16.34■□□□□ 0.21
PRDM16-203ENST00000378391 GUCA1BQ9UMX6 200 aa16.34■□□□□ 0.21
PRDM16-203ENST00000378391 LRRC7Q96NW7 1537 aa16.34■□□□□ 0.21
PRDM16-203ENST00000378391 VIRMAQ69YN4 1812 aaKnown RBP16.34■□□□□ 0.21
PRDM16-203ENST00000378391 ELP1O95163 1332 aa16.34■□□□□ 0.21
PRDM16-203ENST00000378391 GSTO1P78417 241 aa16.34■□□□□ 0.21
PRDM16-203ENST00000378391 STAP2Q9UGK3 403 aa16.34■□□□□ 0.21
PRDM16-203ENST00000378391 KIAA1210Q9ULL0 1709 aa16.34■□□□□ 0.21
PRDM16-203ENST00000378391 FLT4P35916 1363 aa16.34■□□□□ 0.21
PRDM16-203ENST00000378391 SLC27A2O14975 620 aa16.34■□□□□ 0.21
PRDM16-203ENST00000378391 IQUBQ8NA54 791 aa16.34■□□□□ 0.21
PRDM16-203ENST00000378391 GABPB1Q06547 395 aaPredicted RBP16.34■□□□□ 0.21
PRDM16-203ENST00000378391 FBF1Q8TES7 1133 aa16.34■□□□□ 0.21
PRDM16-203ENST00000378391 HOMER2Q9NSB8 354 aa16.34■□□□□ 0.21
PRDM16-203ENST00000378391 ACTN2P35609 894 aa16.33■□□□□ 0.21
PRDM16-203ENST00000378391 TRAF1Q13077 416 aa16.33■□□□□ 0.21
PRDM16-203ENST00000378391 PUF60Q9UHX1 559 aaKnown RBP16.33■□□□□ 0.21
PRDM16-203ENST00000378391 HLA-DOAP06340 250 aa16.33■□□□□ 0.21
PRDM16-203ENST00000378391 RPS6KB1P23443 525 aa16.33■□□□□ 0.21
PRDM16-203ENST00000378391 TUBB2AQ13885 445 aa16.33■□□□□ 0.21
PRDM16-203ENST00000378391 TUBB2BQ9BVA1 445 aa16.33■□□□□ 0.21
PRDM16-203ENST00000378391 EVCP57679 992 aa16.33■□□□□ 0.2
PRDM16-203ENST00000378391 UBXN1Q04323 297 aa16.33■□□□□ 0.2
PRDM16-203ENST00000378391 CCDC174Q6PII3 467 aa16.33■□□□□ 0.2
PRDM16-203ENST00000378391 RASEFQ8IZ41 740 aa16.33■□□□□ 0.2
PRDM16-203ENST00000378391 OTUD6BQ8N6M0 293 aa16.33■□□□□ 0.2
PRDM16-203ENST00000378391 ZBTB17Q13105 803 aa16.33■□□□□ 0.2
PRDM16-203ENST00000378391 ANKS4BQ8N8V4 417 aa16.33■□□□□ 0.2
PRDM16-203ENST00000378391 LLPHQ9BRT6 129 aaKnown RBP16.33■□□□□ 0.2
PRDM16-203ENST00000378391 IKBKGQ9Y6K9 419 aa16.33■□□□□ 0.2
PRDM16-203ENST00000378391 RTL9Q8NET4 1388 aa16.33■□□□□ 0.2
PRDM16-203ENST00000378391 TSPY3P0CV98 308 aa16.32■□□□□ 0.2
PRDM16-203ENST00000378391 TSPY8P0CW00 308 aa16.32■□□□□ 0.2
PRDM16-203ENST00000378391 USP37Q86T82 979 aa16.32■□□□□ 0.2
PRDM16-203ENST00000378391 FEZ2Q9UHY8 353 aaPredicted RBP16.32■□□□□ 0.2
PRDM16-203ENST00000378391 MAP3K19Q56UN5 1328 aa16.32■□□□□ 0.2
PRDM16-203ENST00000378391 MAP3K5Q99683 1374 aa16.32■□□□□ 0.2
PRDM16-203ENST00000378391 AKR1B15C9JRZ8 316 aaPredicted RBP16.32■□□□□ 0.2
PRDM16-203ENST00000378391 ATP2C2O75185 946 aa16.32■□□□□ 0.2
PRDM16-203ENST00000378391 STX17P56962 302 aa16.32■□□□□ 0.2
PRDM16-203ENST00000378391 FAM227BQ96M60 508 aa16.32■□□□□ 0.2
PRDM16-203ENST00000378391 LSG1Q9H089 658 aaKnown RBP16.32■□□□□ 0.2
PRDM16-203ENST00000378391 A0A1B0GVL5 298 aa16.32■□□□□ 0.2
PRDM16-203ENST00000378391 A0A1W2PRG0 241 aa16.32■□□□□ 0.2
PRDM16-203ENST00000378391 PTH1RQ03431 593 aa16.32■□□□□ 0.2
PRDM16-203ENST00000378391 PPP2R3AQ06190 1150 aa16.32■□□□□ 0.2
PRDM16-203ENST00000378391 ELF2Q15723 593 aa16.32■□□□□ 0.2
PRDM16-203ENST00000378391 CCDC129Q6ZRS4 1044 aa16.32■□□□□ 0.2
PRDM16-203ENST00000378391 USP44Q9H0E7 712 aa16.32■□□□□ 0.2
PRDM16-203ENST00000378391 REREQ9P2R6 1566 aa16.31■□□□□ 0.2
PRDM16-203ENST00000378391 C6orf229H3BNL8 230 aa16.31■□□□□ 0.2
PRDM16-203ENST00000378391 RHOXF2BP0C7M4 288 aa16.31■□□□□ 0.2
PRDM16-203ENST00000378391 KRT2P35908 639 aa16.31■□□□□ 0.2
PRDM16-203ENST00000378391 CCDC121Q6ZUS5 278 aa16.31■□□□□ 0.2
PRDM16-203ENST00000378391 CHST3Q7LGC8 479 aa16.31■□□□□ 0.2
PRDM16-203ENST00000378391 RHOXF2Q9BQY4 288 aa16.31■□□□□ 0.2
PRDM16-203ENST00000378391 CLNS1AP54105 237 aaKnown RBP16.31■□□□□ 0.2
PRDM16-203ENST00000378391 SSH3Q8TE77 659 aa16.31■□□□□ 0.2
PRDM16-203ENST00000378391 CABP5Q9NP86 173 aa16.31■□□□□ 0.2
PRDM16-203ENST00000378391 HELLSQ9NRZ9 838 aa16.31■□□□□ 0.2
PRDM16-203ENST00000378391 TULP4Q9NRJ4 1543 aa16.31■□□□□ 0.2
PRDM16-203ENST00000378391 PHACTR2O75167 634 aa16.31■□□□□ 0.2
PRDM16-203ENST00000378391 KIF4AO95239 1232 aa16.31■□□□□ 0.2
PRDM16-203ENST00000378391 HEATR3Q7Z4Q2 680 aa16.31■□□□□ 0.2
PRDM16-203ENST00000378391 TTC6Q86TZ1 520 aa16.31■□□□□ 0.2
PRDM16-203ENST00000378391 TMEM87AQ8NBN3 555 aa16.31■□□□□ 0.2
PRDM16-203ENST00000378391 NAA16Q6N069 864 aaPredicted RBP16.31■□□□□ 0.2
PRDM16-203ENST00000378391 TTC14Q96N46 770 aa16.31■□□□□ 0.2
PRDM16-203ENST00000378391 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.31■□□□□ 0.2
PRDM16-203ENST00000378391 TM6SF1Q9BZW5 370 aa16.3■□□□□ 0.2
PRDM16-203ENST00000378391 AATKQ6ZMQ8 1374 aa16.3■□□□□ 0.2
PRDM16-203ENST00000378391 MYOM1P52179 1685 aa16.3■□□□□ 0.2
PRDM16-203ENST00000378391 SLC39A6Q13433 755 aa16.3■□□□□ 0.2
PRDM16-203ENST00000378391 NEK11Q8NG66 645 aa16.3■□□□□ 0.2
PRDM16-203ENST00000378391 C6orf50Q9HD87 102 aa16.3■□□□□ 0.2
PRDM16-203ENST00000378391 KRT13P13646 458 aa16.3■□□□□ 0.2
PRDM16-203ENST00000378391 CWF19L2Q2TBE0 894 aaKnown RBP16.3■□□□□ 0.2
PRDM16-203ENST00000378391 RILPL1Q5EBL4 403 aa16.3■□□□□ 0.2
PRDM16-203ENST00000378391 KRT79Q5XKE5 535 aa16.3■□□□□ 0.2
PRDM16-203ENST00000378391 FAM76AQ8TAV0 307 aa16.3■□□□□ 0.2
PRDM16-203ENST00000378391 FERMT2Q96AC1 680 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms