RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 BICC1Q9H694 974 aaKnown RBP13.5□□□□□ -0.25
PCDHA9-201ENST00000378122 OTUD7AQ8TE49 926 aaPredicted RBP13.5□□□□□ -0.25
PCDHA9-201ENST00000378122 AKR1B15C9JRZ8 316 aaPredicted RBP13.5□□□□□ -0.25
PCDHA9-201ENST00000378122 HARSP12081 509 aaKnown RBP13.5□□□□□ -0.25
PCDHA9-201ENST00000378122 GADL1Q6ZQY3 521 aa13.5□□□□□ -0.25
PCDHA9-201ENST00000378122 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.5□□□□□ -0.25
PCDHA9-201ENST00000378122 TSNARE1Q96NA8 513 aa13.5□□□□□ -0.25
PCDHA9-201ENST00000378122 CALM1P0DP23 149 aa13.5□□□□□ -0.25
PCDHA9-201ENST00000378122 CALM2P0DP24 149 aa13.5□□□□□ -0.25
PCDHA9-201ENST00000378122 CALM3P0DP25 149 aa13.5□□□□□ -0.25
PCDHA9-201ENST00000378122 ELF2Q15723 593 aa13.5□□□□□ -0.25
PCDHA9-201ENST00000378122 AFAP1L1Q8TED9 768 aa13.5□□□□□ -0.25
PCDHA9-201ENST00000378122 CCDC160A6NGH7 325 aa13.5□□□□□ -0.25
PCDHA9-201ENST00000378122 PPIP5K2O43314 1243 aa13.5□□□□□ -0.25
PCDHA9-201ENST00000378122 RPS6KB1P23443 525 aa13.5□□□□□ -0.25
PCDHA9-201ENST00000378122 APBB1IPQ7Z5R6 666 aaPredicted RBP13.5□□□□□ -0.25
PCDHA9-201ENST00000378122 ZKSCAN3Q9BRR0 538 aa13.49□□□□□ -0.25
PCDHA9-201ENST00000378122 SYCP2Q9BX26 1530 aa13.49□□□□□ -0.25
PCDHA9-201ENST00000378122 KDM2BQ8NHM5 1336 aa13.49□□□□□ -0.25
PCDHA9-201ENST00000378122 GADD45BO75293 160 aaPredicted RBP13.49□□□□□ -0.25
PCDHA9-201ENST00000378122 IL15P40933 162 aaPredicted RBP13.49□□□□□ -0.25
PCDHA9-201ENST00000378122 ZBTB33Q86T24 672 aa13.49□□□□□ -0.25
PCDHA9-201ENST00000378122 PIK3C2GO75747 1445 aa13.49□□□□□ -0.25
PCDHA9-201ENST00000378122 ELP1O95163 1332 aa13.49□□□□□ -0.25
PCDHA9-201ENST00000378122 BICDL2A1A5D9 508 aa13.49□□□□□ -0.25
PCDHA9-201ENST00000378122 BRAPQ7Z569 592 aa13.49□□□□□ -0.25
PCDHA9-201ENST00000378122 CPLX4Q7Z7G2 160 aa13.49□□□□□ -0.25
PCDHA9-201ENST00000378122 CCDC50Q8IVM0 306 aa13.49□□□□□ -0.25
PCDHA9-201ENST00000378122 MIGA1Q8NAN2 632 aa13.49□□□□□ -0.25
PCDHA9-201ENST00000378122 UBLCP1Q8WVY7 318 aaPredicted RBP13.49□□□□□ -0.25
PCDHA9-201ENST00000378122 TSGA10Q9BZW7 698 aa13.49□□□□□ -0.25
PCDHA9-201ENST00000378122 SSX2IPQ9Y2D8 614 aa13.49□□□□□ -0.25
PCDHA9-201ENST00000378122 DPP8Q6V1X1 898 aaPredicted RBP13.49□□□□□ -0.25
PCDHA9-201ENST00000378122 GBP6Q6ZN66 633 aa13.49□□□□□ -0.25
PCDHA9-201ENST00000378122 PPP1R9BQ96SB3 815 aa13.49□□□□□ -0.25
PCDHA9-201ENST00000378122 SH3BP5O60239 455 aa13.49□□□□□ -0.25
PCDHA9-201ENST00000378122 DHX32Q7L7V1 743 aaKnown RBP13.49□□□□□ -0.25
PCDHA9-201ENST00000378122 TEX14Q8IWB6 1497 aa13.49□□□□□ -0.25
PCDHA9-201ENST00000378122 TCP10Q12799 353 aa13.48□□□□□ -0.25
PCDHA9-201ENST00000378122 LMBR1Q8WVP7 490 aa13.48□□□□□ -0.25
PCDHA9-201ENST00000378122 LAMC3Q9Y6N6 1575 aa13.48□□□□□ -0.25
PCDHA9-201ENST00000378122 ZBTB7BO15156 539 aaPredicted RBP13.48□□□□□ -0.25
PCDHA9-201ENST00000378122 AKAP4Q5JQC9 854 aa13.48□□□□□ -0.25
PCDHA9-201ENST00000378122 TUBB4BP68371 445 aa13.48□□□□□ -0.25
PCDHA9-201ENST00000378122 NAA16Q6N069 864 aaPredicted RBP13.48□□□□□ -0.25
PCDHA9-201ENST00000378122 DDX12PQ92771 950 aa13.48□□□□□ -0.25
PCDHA9-201ENST00000378122 POLKQ9UBT6 870 aa13.48□□□□□ -0.25
PCDHA9-201ENST00000378122 SLC27A2O14975 620 aa13.48□□□□□ -0.25
PCDHA9-201ENST00000378122 FERP16591 822 aa13.48□□□□□ -0.25
PCDHA9-201ENST00000378122 IQCGQ9H095 443 aaKnown RBP13.48□□□□□ -0.25
PCDHA9-201ENST00000378122 CBX8Q9HC52 389 aa13.48□□□□□ -0.25
PCDHA9-201ENST00000378122 SNX14Q9Y5W7 946 aa13.48□□□□□ -0.25
PCDHA9-201ENST00000378122 ACTN2P35609 894 aa13.47□□□□□ -0.25
PCDHA9-201ENST00000378122 BRDTQ58F21 947 aaPredicted RBP13.47□□□□□ -0.25
PCDHA9-201ENST00000378122 CCDC117Q8IWD4 279 aaPredicted RBP13.47□□□□□ -0.25
PCDHA9-201ENST00000378122 PLVAPQ9BX97 442 aa13.47□□□□□ -0.25
PCDHA9-201ENST00000378122 B4DLN1 442 aa13.47□□□□□ -0.25
PCDHA9-201ENST00000378122 DTNBO60941 627 aa13.47□□□□□ -0.25
PCDHA9-201ENST00000378122 EEF2P13639 858 aaKnown RBP13.47□□□□□ -0.25
PCDHA9-201ENST00000378122 ZNF75DP51815 510 aa13.47□□□□□ -0.25
PCDHA9-201ENST00000378122 MRPL12P52815 198 aaKnown RBP13.47□□□□□ -0.25
PCDHA9-201ENST00000378122 MYL5Q02045 173 aa13.47□□□□□ -0.25
PCDHA9-201ENST00000378122 ZNF174Q15697 407 aa13.47□□□□□ -0.25
PCDHA9-201ENST00000378122 CCDC122Q5T0U0 273 aa13.47□□□□□ -0.25
PCDHA9-201ENST00000378122 PRPHP41219 470 aa13.47□□□□□ -0.25
PCDHA9-201ENST00000378122 PHACTR3Q96KR7 559 aa13.47□□□□□ -0.25
PCDHA9-201ENST00000378122 KCNK9Q9NPC2 374 aa13.47□□□□□ -0.25
PCDHA9-201ENST00000378122 BACH1O14867 736 aa13.47□□□□□ -0.25
PCDHA9-201ENST00000378122 CCDC25Q86WR0 208 aa13.47□□□□□ -0.25
PCDHA9-201ENST00000378122 CLSTN2Q9H4D0 955 aa13.47□□□□□ -0.25
PCDHA9-201ENST00000378122 FAM160A1Q05DH4 1040 aa13.47□□□□□ -0.25
PCDHA9-201ENST00000378122 RNF169Q8NCN4 708 aa13.47□□□□□ -0.25
PCDHA9-201ENST00000378122 CCDC63Q8NA47 563 aa13.46□□□□□ -0.25
PCDHA9-201ENST00000378122 SMARCC2Q8TAQ2 1214 aa13.46□□□□□ -0.25
PCDHA9-201ENST00000378122 RSRC1Q96IZ7 334 aaKnown RBP13.46□□□□□ -0.25
PCDHA9-201ENST00000378122 ANO3Q9BYT9 981 aa13.46□□□□□ -0.25
PCDHA9-201ENST00000378122 C6orf50Q9HD87 102 aa13.46□□□□□ -0.25
PCDHA9-201ENST00000378122 CSADQ9Y600 493 aa13.46□□□□□ -0.25
PCDHA9-201ENST00000378122 MAP3K5Q99683 1374 aa13.46□□□□□ -0.25
PCDHA9-201ENST00000378122 SOS1Q07889 1333 aaPredicted RBP13.46□□□□□ -0.25
PCDHA9-201ENST00000378122 RRP36Q96EU6 259 aaKnown RBP13.46□□□□□ -0.25
PCDHA9-201ENST00000378122 VWA3AA6NCI4 1184 aa13.46□□□□□ -0.25
PCDHA9-201ENST00000378122 NAA25Q14CX7 972 aa13.46□□□□□ -0.26
PCDHA9-201ENST00000378122 CARD14Q9BXL6 1004 aa13.46□□□□□ -0.26
PCDHA9-201ENST00000378122 SAMD15Q9P1V8 674 aa13.46□□□□□ -0.26
PCDHA9-201ENST00000378122 TLDC2A0PJX2 215 aa13.46□□□□□ -0.26
PCDHA9-201ENST00000378122 ZNF445P59923 1031 aa13.46□□□□□ -0.26
PCDHA9-201ENST00000378122 NFATC2IPQ8NCF5 419 aa13.46□□□□□ -0.26
PCDHA9-201ENST00000378122 NBPF3Q9H094 633 aa13.46□□□□□ -0.26
PCDHA9-201ENST00000378122 LUC7L2Q9Y383 392 aaKnown RBP13.46□□□□□ -0.26
PCDHA9-201ENST00000378122 CNGA4Q8IV77 575 aa13.45□□□□□ -0.26
PCDHA9-201ENST00000378122 SULF1Q8IWU6 871 aa13.45□□□□□ -0.26
PCDHA9-201ENST00000378122 CARD6Q9BX69 1037 aa13.45□□□□□ -0.26
PCDHA9-201ENST00000378122 CCDC77Q9BR77 488 aa13.45□□□□□ -0.26
PCDHA9-201ENST00000378122 VPS16Q9H269 839 aa13.45□□□□□ -0.26
PCDHA9-201ENST00000378122 G2E3Q7L622 706 aa13.45□□□□□ -0.26
PCDHA9-201ENST00000378122 NAPGQ99747 312 aaPredicted RBP13.45□□□□□ -0.26
PCDHA9-201ENST00000378122 RABEP2Q9H5N1 569 aa13.45□□□□□ -0.26
PCDHA9-201ENST00000378122 RAD50Q92878 1312 aa13.45□□□□□ -0.26
PCDHA9-201ENST00000378122 VAV2P52735 878 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms