RNA–Protein interactions for RNA: ENST00000377017.5

TIMP1-202, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 2 BASIC

Gene TIMP1, Length 626 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-202ENST00000377017 YY1P25490 414 aa15.84■□□□□ 0.13
TIMP1-202ENST00000377017 PPP4CP60510 307 aa15.84■□□□□ 0.13
TIMP1-202ENST00000377017 APOBEC3HQ6NTF7 200 aaKnown RBP15.84■□□□□ 0.13
TIMP1-202ENST00000377017 ADGRA1Q86SQ6 560 aa15.84■□□□□ 0.13
TIMP1-202ENST00000377017 MIGA1Q8NAN2 632 aa15.84■□□□□ 0.13
TIMP1-202ENST00000377017 TAF1DQ9H5J8 278 aaPredicted RBP15.84■□□□□ 0.13
TIMP1-202ENST00000377017 RRAGCQ9HB90 399 aa15.84■□□□□ 0.13
TIMP1-202ENST00000377017 GPBP1L1Q9HC44 474 aaPredicted RBP15.84■□□□□ 0.13
TIMP1-202ENST00000377017 AATFQ9NY61 560 aaKnown RBP eCLIP15.84■□□□□ 0.13
TIMP1-202ENST00000377017 RAD50Q92878 1312 aa15.84■□□□□ 0.13
TIMP1-202ENST00000377017 CHMLP26374 656 aa15.83■□□□□ 0.12
TIMP1-202ENST00000377017 NMIQ13287 307 aaPredicted RBP15.83■□□□□ 0.12
TIMP1-202ENST00000377017 MCMDC2Q4G0Z9 681 aa15.83■□□□□ 0.12
TIMP1-202ENST00000377017 CWC27Q6UX04 472 aaKnown RBP15.83■□□□□ 0.12
TIMP1-202ENST00000377017 TRPM4Q8TD43 1214 aa15.83■□□□□ 0.12
TIMP1-202ENST00000377017 OSBP2Q969R2 916 aa15.83■□□□□ 0.12
TIMP1-202ENST00000377017 ZBED3Q96IU2 234 aaPredicted RBP15.83■□□□□ 0.12
TIMP1-202ENST00000377017 PRMT6Q96LA8 375 aaPredicted RBP15.83■□□□□ 0.12
TIMP1-202ENST00000377017 USP40Q9NVE5 1235 aa15.83■□□□□ 0.12
TIMP1-202ENST00000377017 POTECB2RU33 542 aa15.82■□□□□ 0.12
TIMP1-202ENST00000377017 MBD4O95243 580 aa15.82■□□□□ 0.12
TIMP1-202ENST00000377017 GNAT2P19087 354 aa15.82■□□□□ 0.12
TIMP1-202ENST00000377017 SPDYE2Q495Y8 402 aa15.82■□□□□ 0.12
TIMP1-202ENST00000377017 EAPPQ56P03 285 aaPredicted RBP15.82■□□□□ 0.12
TIMP1-202ENST00000377017 ZC3H15Q8WU90 426 aaKnown RBP15.82■□□□□ 0.12
TIMP1-202ENST00000377017 FAM227BQ96M60 508 aa15.82■□□□□ 0.12
TIMP1-202ENST00000377017 CRNKL1Q9BZJ0 848 aaKnown RBP15.82■□□□□ 0.12
TIMP1-202ENST00000377017 PUS7LQ9H0K6 701 aaKnown RBP15.82■□□□□ 0.12
TIMP1-202ENST00000377017 A0A0D9SFI3 127 aa15.81■□□□□ 0.12
TIMP1-202ENST00000377017 GPAA1O43292 621 aa15.81■□□□□ 0.12
TIMP1-202ENST00000377017 EIF5BO60841 1220 aaKnown RBP15.81■□□□□ 0.12
TIMP1-202ENST00000377017 EGFRP00533 1210 aa15.81■□□□□ 0.12
TIMP1-202ENST00000377017 CHGBP05060 677 aa15.81■□□□□ 0.12
TIMP1-202ENST00000377017 TNFAIP1Q13829 316 aa15.81■□□□□ 0.12
TIMP1-202ENST00000377017 NBPF9Q3BBW0 867 aa15.81■□□□□ 0.12
TIMP1-202ENST00000377017 SLFNL1Q499Z3 407 aa15.81■□□□□ 0.12
TIMP1-202ENST00000377017 CDC42EP5Q6NZY7 148 aa15.81■□□□□ 0.12
TIMP1-202ENST00000377017 TEX11Q8IYF3 940 aa15.81■□□□□ 0.12
TIMP1-202ENST00000377017 DDRGK1Q96HY6 314 aa15.81■□□□□ 0.12
TIMP1-202ENST00000377017 RIOK1Q9BRS2 568 aaKnown RBP15.81■□□□□ 0.12
TIMP1-202ENST00000377017 TDRD3Q9H7E2 651 aaKnown RBP15.81■□□□□ 0.12
TIMP1-202ENST00000377017 NMRK2Q9NPI5 230 aa15.81■□□□□ 0.12
TIMP1-202ENST00000377017 ZNF70Q9UC06 446 aaPredicted RBP15.81■□□□□ 0.12
TIMP1-202ENST00000377017 PCDHAC2Q9Y5I4 1007 aa15.81■□□□□ 0.12
TIMP1-202ENST00000377017 CCDC171Q6TFL3 1326 aa15.8■□□□□ 0.12
TIMP1-202ENST00000377017 PITPNM2Q9BZ72 1349 aa15.8■□□□□ 0.12
TIMP1-202ENST00000377017 CLRN2A0PK11 232 aa15.8■□□□□ 0.12
TIMP1-202ENST00000377017 M0R2C6 588 aa15.8■□□□□ 0.12
TIMP1-202ENST00000377017 USP5P45974 858 aa15.8■□□□□ 0.12
TIMP1-202ENST00000377017 TNNI2P48788 182 aa15.8■□□□□ 0.12
TIMP1-202ENST00000377017 RHBDL3P58872 404 aa15.8■□□□□ 0.12
TIMP1-202ENST00000377017 DYNLL1P63167 89 aaKnown RBP15.8■□□□□ 0.12
TIMP1-202ENST00000377017 APOBEC3FQ8IUX4 373 aaKnown RBP15.8■□□□□ 0.12
TIMP1-202ENST00000377017 LCORLQ8N3X6 602 aa15.8■□□□□ 0.12
TIMP1-202ENST00000377017 SH3RF3Q8TEJ3 882 aaPredicted RBP15.8■□□□□ 0.12
TIMP1-202ENST00000377017 DCPSQ96C86 337 aaKnown RBP15.8■□□□□ 0.12
TIMP1-202ENST00000377017 SEC62Q99442 399 aaKnown RBP15.8■□□□□ 0.12
TIMP1-202ENST00000377017 ARMT1Q9H993 441 aa15.8■□□□□ 0.12
TIMP1-202ENST00000377017 VEZTQ9HBM0 779 aa15.8■□□□□ 0.12
TIMP1-202ENST00000377017 FOCADQ5VW36 1801 aa15.8■□□□□ 0.12
TIMP1-202ENST00000377017 RPAP1Q9BWH6 1393 aaPredicted RBP15.79■□□□□ 0.12
TIMP1-202ENST00000377017 HIRAP54198 1017 aaPredicted RBP15.79■□□□□ 0.12
TIMP1-202ENST00000377017 ANGEL2Q5VTE6 544 aaKnown RBP15.79■□□□□ 0.12
TIMP1-202ENST00000377017 FKBP1CQ5VVH2 108 aa15.79■□□□□ 0.12
TIMP1-202ENST00000377017 STRBPQ96SI9 672 aaKnown RBP15.79■□□□□ 0.12
TIMP1-202ENST00000377017 GGA3Q9NZ52 723 aa15.79■□□□□ 0.12
TIMP1-202ENST00000377017 CLEC11AQ9Y240 323 aa15.79■□□□□ 0.12
TIMP1-202ENST00000377017 SLC4A4Q9Y6R1 1079 aa15.79■□□□□ 0.12
TIMP1-202ENST00000377017 CDK5RAP2Q96SN8 1893 aa15.79■□□□□ 0.12
TIMP1-202ENST00000377017 SGSM2O43147 1006 aa15.78■□□□□ 0.12
TIMP1-202ENST00000377017 NPM3O75607 178 aaKnown RBP15.78■□□□□ 0.12
TIMP1-202ENST00000377017 LDHDQ86WU2 507 aa15.78■□□□□ 0.12
TIMP1-202ENST00000377017 IDI2Q9BXS1 227 aa15.78■□□□□ 0.12
TIMP1-202ENST00000377017 NACAP1Q9BZK3 213 aa15.78■□□□□ 0.12
TIMP1-202ENST00000377017 ATP8A2Q9NTI2 1148 aa15.78■□□□□ 0.12
TIMP1-202ENST00000377017 NAV1Q8NEY1 1877 aa15.78■□□□□ 0.12
TIMP1-202ENST00000377017 ENTPD3O75355 529 aa15.77■□□□□ 0.12
TIMP1-202ENST00000377017 PICALMQ13492 652 aa15.77■□□□□ 0.12
TIMP1-202ENST00000377017 CCDC129Q6ZRS4 1044 aa15.77■□□□□ 0.12
TIMP1-202ENST00000377017 KIAA1211Q6ZU35 1233 aa15.77■□□□□ 0.12
TIMP1-202ENST00000377017 SULF1Q8IWU6 871 aa15.77■□□□□ 0.12
TIMP1-202ENST00000377017 TGFBRAP1Q8WUH2 860 aa15.77■□□□□ 0.12
TIMP1-202ENST00000377017 ESYT1Q9BSJ8 1104 aa15.77■□□□□ 0.12
TIMP1-202ENST00000377017 TCP10L2B9ZVM9 353 aa15.76■□□□□ 0.11
TIMP1-202ENST00000377017 PATL2C9JE40 543 aaKnown RBP15.76■□□□□ 0.11
TIMP1-202ENST00000377017 WDHD1O75717 1129 aaPredicted RBP15.76■□□□□ 0.11
TIMP1-202ENST00000377017 APPP05067 770 aa15.76■□□□□ 0.11
TIMP1-202ENST00000377017 GIMAP6Q6P9H5 292 aa15.76■□□□□ 0.11
TIMP1-202ENST00000377017 ZNF589Q86UQ0 364 aaPredicted RBP15.76■□□□□ 0.11
TIMP1-202ENST00000377017 FAM83AQ86UY5 434 aa15.76■□□□□ 0.11
TIMP1-202ENST00000377017 AMOTL1Q8IY63 956 aa15.76■□□□□ 0.11
TIMP1-202ENST00000377017 PGAP2Q9UHJ9 254 aa15.76■□□□□ 0.11
TIMP1-202ENST00000377017 PPP2R3BQ9Y5P8 575 aa15.76■□□□□ 0.11
TIMP1-202ENST00000377017 FLT1P17948 1338 aa15.75■□□□□ 0.11
TIMP1-202ENST00000377017 CACNB3P54284 484 aa15.75■□□□□ 0.11
TIMP1-202ENST00000377017 MAPKAPK5Q8IW41 473 aa15.75■□□□□ 0.11
TIMP1-202ENST00000377017 SDR42E1Q8WUS8 393 aa15.75■□□□□ 0.11
TIMP1-202ENST00000377017 FAM151AQ8WW52 585 aa15.75■□□□□ 0.11
TIMP1-202ENST00000377017 OSBPL5Q9H0X9 879 aaPredicted RBP15.75■□□□□ 0.11
TIMP1-202ENST00000377017 POLR2AP24928 1970 aaKnown RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms