RNA–Protein interactions for RNA: ENST00000376491.7

CLCN6-204, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 927 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-204ENST00000376491 ATP2B3Q16720 1220 aa18.65■□□□□ 0.58
CLCN6-204ENST00000376491 INTS3Q68E01 1043 aaKnown RBP18.65■□□□□ 0.58
CLCN6-204ENST00000376491 CDC42EP5Q6NZY7 148 aa18.65■□□□□ 0.58
CLCN6-204ENST00000376491 ARMC5Q96C12 935 aa18.65■□□□□ 0.58
CLCN6-204ENST00000376491 PA2G4Q9UQ80 394 aaKnown RBP18.65■□□□□ 0.58
CLCN6-204ENST00000376491 LRRFIP2Q9Y608 721 aaKnown RBP18.65■□□□□ 0.58
CLCN6-204ENST00000376491 BTBD19C9JJ37 291 aa18.64■□□□□ 0.57
CLCN6-204ENST00000376491 INPP5BP32019 993 aa18.64■□□□□ 0.57
CLCN6-204ENST00000376491 NFIAQ12857 509 aa18.64■□□□□ 0.57
CLCN6-204ENST00000376491 CEP126Q9P2H0 1117 aa18.64■□□□□ 0.57
CLCN6-204ENST00000376491 MYH2Q9UKX2 1941 aa18.63■□□□□ 0.57
CLCN6-204ENST00000376491 CT47B1P0C2W7 299 aaPredicted RBP18.63■□□□□ 0.57
CLCN6-204ENST00000376491 CETPP11597 493 aa18.63■□□□□ 0.57
CLCN6-204ENST00000376491 PHKA1P46020 1223 aa18.63■□□□□ 0.57
CLCN6-204ENST00000376491 TCP10Q12799 353 aa18.63■□□□□ 0.57
CLCN6-204ENST00000376491 PPIL2Q13356 520 aa18.63■□□□□ 0.57
CLCN6-204ENST00000376491 DCAF15Q66K64 600 aa18.63■□□□□ 0.57
CLCN6-204ENST00000376491 FAM151AQ8WW52 585 aa18.63■□□□□ 0.57
CLCN6-204ENST00000376491 HOOK2Q96ED9 719 aa18.63■□□□□ 0.57
CLCN6-204ENST00000376491 ZNF341Q9BYN7 854 aa18.63■□□□□ 0.57
CLCN6-204ENST00000376491 MKI67P46013 3256 aaKnown RBP18.62■□□□□ 0.57
CLCN6-204ENST00000376491 MEIS3Q99687 375 aa18.62■□□□□ 0.57
CLCN6-204ENST00000376491 API5Q9BZZ5 524 aaKnown RBP18.62■□□□□ 0.57
CLCN6-204ENST00000376491 FAM198AQ9UFP1 575 aa18.62■□□□□ 0.57
CLCN6-204ENST00000376491 ZNF112Q9UJU3 913 aa18.62■□□□□ 0.57
CLCN6-204ENST00000376491 SALL1Q9NSC2 1324 aa18.62■□□□□ 0.57
CLCN6-204ENST00000376491 TLR2O60603 784 aa18.61■□□□□ 0.57
CLCN6-204ENST00000376491 LDHBP07195 334 aaKnown RBP18.61■□□□□ 0.57
CLCN6-204ENST00000376491 ADORA1P30542 326 aa18.61■□□□□ 0.57
CLCN6-204ENST00000376491 IL15P40933 162 aaPredicted RBP18.61■□□□□ 0.57
CLCN6-204ENST00000376491 SNAPC2Q13487 334 aa18.61■□□□□ 0.57
CLCN6-204ENST00000376491 ARHGAP39Q9C0H5 1083 aa18.61■□□□□ 0.57
CLCN6-204ENST00000376491 ZCCHC17Q9NP64 241 aaKnown RBP18.61■□□□□ 0.57
CLCN6-204ENST00000376491 COPRSQ9NQ92 184 aa18.61■□□□□ 0.57
CLCN6-204ENST00000376491 GNL3LQ9NVN8 582 aaKnown RBP18.61■□□□□ 0.57
CLCN6-204ENST00000376491 PTCH2Q9Y6C5 1203 aa18.61■□□□□ 0.57
CLCN6-204ENST00000376491 EN2P19622 333 aaPredicted RBP18.6■□□□□ 0.57
CLCN6-204ENST00000376491 PPATQ06203 517 aa18.6■□□□□ 0.57
CLCN6-204ENST00000376491 ZFPM1Q8IX07 1006 aa18.6■□□□□ 0.57
CLCN6-204ENST00000376491 ZNF333Q96JL9 665 aa18.6■□□□□ 0.57
CLCN6-204ENST00000376491 USP40Q9NVE5 1235 aa18.6■□□□□ 0.57
CLCN6-204ENST00000376491 DENND2AQ9ULE3 1009 aa18.6■□□□□ 0.57
CLCN6-204ENST00000376491 BRCA2P51587 3418 aa18.59■□□□□ 0.57
CLCN6-204ENST00000376491 SEMA3EO15041 775 aa18.59■□□□□ 0.57
CLCN6-204ENST00000376491 ZBTB22O15209 634 aa18.59■□□□□ 0.57
CLCN6-204ENST00000376491 RARSP54136 660 aaKnown RBP18.59■□□□□ 0.57
CLCN6-204ENST00000376491 CCDC102BQ68D86 513 aa18.59■□□□□ 0.57
CLCN6-204ENST00000376491 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.59■□□□□ 0.57
CLCN6-204ENST00000376491 TIMM10P62072 90 aa18.58■□□□□ 0.56
CLCN6-204ENST00000376491 LACTBP83111 547 aaPredicted RBP18.58■□□□□ 0.56
CLCN6-204ENST00000376491 ARHGEF6Q15052 776 aa18.58■□□□□ 0.56
CLCN6-204ENST00000376491 KCNH4Q9UQ05 1017 aa18.58■□□□□ 0.56
CLCN6-204ENST00000376491 HDAC5Q9UQL6 1122 aa18.58■□□□□ 0.56
CLCN6-204ENST00000376491 DOCK2Q92608 1830 aa18.58■□□□□ 0.56
CLCN6-204ENST00000376491 MOGSQ13724 837 aa18.57■□□□□ 0.56
CLCN6-204ENST00000376491 NOL9Q5SY16 702 aaKnown RBP18.57■□□□□ 0.56
CLCN6-204ENST00000376491 C17orf99Q6UX52 265 aa18.57■□□□□ 0.56
CLCN6-204ENST00000376491 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.57■□□□□ 0.56
CLCN6-204ENST00000376491 ATRNL1Q5VV63 1379 aa18.56■□□□□ 0.56
CLCN6-204ENST00000376491 GAKO14976 1311 aa18.56■□□□□ 0.56
CLCN6-204ENST00000376491 WDHD1O75717 1129 aaPredicted RBP18.56■□□□□ 0.56
CLCN6-204ENST00000376491 CTGFP29279 349 aa18.56■□□□□ 0.56
CLCN6-204ENST00000376491 RASGRF1Q13972 1273 aa18.56■□□□□ 0.56
CLCN6-204ENST00000376491 SLC9C1Q4G0N8 1177 aa18.56■□□□□ 0.56
CLCN6-204ENST00000376491 ANKRD23Q86SG2 305 aa18.56■□□□□ 0.56
CLCN6-204ENST00000376491 ADGRA2Q96PE1 1338 aa18.55■□□□□ 0.56
CLCN6-204ENST00000376491 ECM2O94769 699 aaPredicted RBP18.55■□□□□ 0.56
CLCN6-204ENST00000376491 RGS3P49796 1198 aa18.55■□□□□ 0.56
CLCN6-204ENST00000376491 SH3BP5LQ7L8J4 393 aa18.55■□□□□ 0.56
CLCN6-204ENST00000376491 ARHGAP45Q92619 1136 aa18.55■□□□□ 0.56
CLCN6-204ENST00000376491 TMEM106CQ9BVX2 250 aa18.55■□□□□ 0.56
CLCN6-204ENST00000376491 IDI2Q9BXS1 227 aa18.55■□□□□ 0.56
CLCN6-204ENST00000376491 CPA4Q9UI42 421 aa18.55■□□□□ 0.56
CLCN6-204ENST00000376491 RFX7Q2KHR2 1363 aa18.55■□□□□ 0.56
CLCN6-204ENST00000376491 A0A1B0GUL7 405 aa18.54■□□□□ 0.56
CLCN6-204ENST00000376491 PHF20L1A8MW92 1017 aa18.54■□□□□ 0.56
CLCN6-204ENST00000376491 PDHXO00330 501 aa18.54■□□□□ 0.56
CLCN6-204ENST00000376491 SLURP2P0DP57 97 aa18.54■□□□□ 0.56
CLCN6-204ENST00000376491 TFCP2Q12800 502 aa18.54■□□□□ 0.56
CLCN6-204ENST00000376491 MTX1Q13505 466 aa18.54■□□□□ 0.56
CLCN6-204ENST00000376491 KIF22Q14807 665 aa18.54■□□□□ 0.56
CLCN6-204ENST00000376491 NBPF11Q86T75 865 aa18.54■□□□□ 0.56
CLCN6-204ENST00000376491 ZGPATQ8N5A5 531 aaKnown RBP18.54■□□□□ 0.56
CLCN6-204ENST00000376491 XAGE2Q96GT9 111 aa18.54■□□□□ 0.56
CLCN6-204ENST00000376491 TNNQ9UQP3 1299 aa18.54■□□□□ 0.56
CLCN6-204ENST00000376491 PDS5AQ29RF7 1337 aaKnown RBP18.53■□□□□ 0.56
CLCN6-204ENST00000376491 CCER2I3L3R5 266 aa18.53■□□□□ 0.56
CLCN6-204ENST00000376491 SRGAP3O43295 1099 aa18.53■□□□□ 0.56
CLCN6-204ENST00000376491 ENTPD3O75355 529 aa18.53■□□□□ 0.56
CLCN6-204ENST00000376491 MYCP01106 439 aaPredicted RBP18.53■□□□□ 0.56
CLCN6-204ENST00000376491 SH3TC2Q8TF17 1288 aa18.53■□□□□ 0.56
CLCN6-204ENST00000376491 FAM163AQ96GL9 167 aaPredicted RBP18.53■□□□□ 0.56
CLCN6-204ENST00000376491 DDX4Q9NQI0 724 aaKnown RBP18.53■□□□□ 0.56
CLCN6-204ENST00000376491 ABCF2Q9UG63 623 aa18.53■□□□□ 0.56
CLCN6-204ENST00000376491 PTPRFP10586 1907 aa18.53■□□□□ 0.56
CLCN6-204ENST00000376491 DDTLA6NHG4 134 aaPredicted RBP18.52■□□□□ 0.56
CLCN6-204ENST00000376491 GNAI3P08754 354 aa18.52■□□□□ 0.56
CLCN6-204ENST00000376491 MAP3K10Q02779 954 aa18.52■□□□□ 0.56
CLCN6-204ENST00000376491 GPAT2Q6NUI2 795 aa18.52■□□□□ 0.56
CLCN6-204ENST00000376491 DZIP1Q86YF9 867 aaKnown RBP18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms