RNA–Protein interactions for RNA: ENST00000376406.7

MDC1-201, Transcript of mediator of DNA damage checkpoint 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene MDC1, Length 7,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-201ENST00000376406 MAP3K4Q9Y6R4 1608 aa12.42□□□□□ -0.42
MDC1-201ENST00000376406 TMEM94Q12767 1356 aa12.42□□□□□ -0.42
MDC1-201ENST00000376406 CTAGE15A4D2H0 777 aa12.42□□□□□ -0.42
MDC1-201ENST00000376406 CTAGE8P0CG41 777 aa12.42□□□□□ -0.42
MDC1-201ENST00000376406 NOP2P46087 812 aaKnown RBP12.42□□□□□ -0.42
MDC1-201ENST00000376406 FAM160A1Q05DH4 1040 aa12.42□□□□□ -0.42
MDC1-201ENST00000376406 CTAGE6Q86UF2 777 aa12.42□□□□□ -0.42
MDC1-201ENST00000376406 CTAGE4Q8IX94 777 aa12.42□□□□□ -0.42
MDC1-201ENST00000376406 BCCIPQ9P287 314 aaKnown RBP eCLIP12.42□□□□□ -0.42
MDC1-201ENST00000376406 SLU7O95391 586 aaKnown RBP12.42□□□□□ -0.42
MDC1-201ENST00000376406 KRT83P78385 493 aa12.42□□□□□ -0.42
MDC1-201ENST00000376406 LZTS2Q9BRK4 669 aa12.42□□□□□ -0.42
MDC1-201ENST00000376406 PABPC4Q13310 644 aaKnown RBP eCLIP12.42□□□□□ -0.422e-6■■■□□ 18.9
MDC1-201ENST00000376406 HLTFQ14527 1009 aaKnown RBP eCLIP12.42□□□□□ -0.421e-7■■□□□ 11.8
MDC1-201ENST00000376406 PPP2R5BQ15173 497 aa12.42□□□□□ -0.42
MDC1-201ENST00000376406 ZNF445P59923 1031 aa12.42□□□□□ -0.42
MDC1-201ENST00000376406 PICALMQ13492 652 aa12.42□□□□□ -0.42
MDC1-201ENST00000376406 BICD1Q96G01 975 aa12.42□□□□□ -0.42
MDC1-201ENST00000376406 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.42□□□□□ -0.425e-7■■■■□ 26.4
MDC1-201ENST00000376406 PTGS1P23219 599 aa12.42□□□□□ -0.42
MDC1-201ENST00000376406 DDX12PQ92771 950 aa12.42□□□□□ -0.42
MDC1-201ENST00000376406 QTRT2Q9H974 415 aaKnown RBP12.42□□□□□ -0.42
MDC1-201ENST00000376406 F8W031 263 aaPredicted RBP12.41□□□□□ -0.42
MDC1-201ENST00000376406 GOLGA1Q92805 767 aa12.41□□□□□ -0.42
MDC1-201ENST00000376406 TMEM87BQ96K49 555 aa12.41□□□□□ -0.42
MDC1-201ENST00000376406 ARFGAP3Q9NP61 516 aa12.41□□□□□ -0.42
MDC1-201ENST00000376406 KCNG1Q9UIX4 513 aa12.41□□□□□ -0.42
MDC1-201ENST00000376406 GJA3Q9Y6H8 435 aa12.41□□□□□ -0.42
MDC1-201ENST00000376406 IVNS1ABPQ9Y6Y0 642 aa12.41□□□□□ -0.42
MDC1-201ENST00000376406 MAP3K9P80192 1104 aa12.41□□□□□ -0.42
MDC1-201ENST00000376406 MCTP2Q6DN12 878 aa12.41□□□□□ -0.42
MDC1-201ENST00000376406 ZNF710Q8N1W2 664 aa12.41□□□□□ -0.42
MDC1-201ENST00000376406 IMPG2Q9BZV3 1241 aa12.41□□□□□ -0.42
MDC1-201ENST00000376406 ABCC3O15438 1527 aa12.41□□□□□ -0.42
MDC1-201ENST00000376406 EYA2O00167 538 aa12.41□□□□□ -0.42
MDC1-201ENST00000376406 RBM26Q5T8P6 1007 aaKnown RBP12.41□□□□□ -0.42
MDC1-201ENST00000376406 A0A1B0GUL7 405 aa12.41□□□□□ -0.42
MDC1-201ENST00000376406 ASIC1P78348 528 aa12.41□□□□□ -0.42
MDC1-201ENST00000376406 TEX11Q8IYF3 940 aa12.41□□□□□ -0.42
MDC1-201ENST00000376406 AKR1B10O60218 316 aa12.4□□□□□ -0.42
MDC1-201ENST00000376406 CTNNBL1Q8WYA6 563 aaPredicted RBP12.4□□□□□ -0.42
MDC1-201ENST00000376406 GSTTP1A0A1W2PQM5 241 aa12.4□□□□□ -0.42
MDC1-201ENST00000376406 DCAF15Q66K64 600 aa12.4□□□□□ -0.42
MDC1-201ENST00000376406 SELENOOQ9BVL4 669 aa12.4□□□□□ -0.42
MDC1-201ENST00000376406 IFNKQ9P0W0 207 aa12.4□□□□□ -0.42
MDC1-201ENST00000376406 PNMA6EA0A0J9YXQ4 647 aa12.4□□□□□ -0.42
MDC1-201ENST00000376406 INCENPQ9NQS7 918 aa12.4□□□□□ -0.42
MDC1-201ENST00000376406 IQSEC3Q9UPP2 1182 aaPredicted RBP12.4□□□□□ -0.42
MDC1-201ENST00000376406 KDRP35968 1356 aa12.4□□□□□ -0.42
MDC1-201ENST00000376406 IBTKQ9P2D0 1353 aaPredicted RBP12.4□□□□□ -0.42
MDC1-201ENST00000376406 HSPA4P34932 840 aa12.4□□□□□ -0.42
MDC1-201ENST00000376406 LPIN2Q92539 896 aa12.4□□□□□ -0.42
MDC1-201ENST00000376406 TSGA10Q9BZW7 698 aa12.4□□□□□ -0.42
MDC1-201ENST00000376406 RBSNQ9H1K0 784 aa12.4□□□□□ -0.42
MDC1-201ENST00000376406 RNF17Q9BXT8 1623 aaKnown RBP12.4□□□□□ -0.42
MDC1-201ENST00000376406 PPP1R2P41236 205 aa12.4□□□□□ -0.42
MDC1-201ENST00000376406 CLSTN2Q9H4D0 955 aa12.4□□□□□ -0.42
MDC1-201ENST00000376406 AS3MTQ9HBK9 375 aa12.4□□□□□ -0.42
MDC1-201ENST00000376406 MCM7P33993 719 aa12.39□□□□□ -0.43
MDC1-201ENST00000376406 QRICH2Q9H0J4 1663 aa12.39□□□□□ -0.43
MDC1-201ENST00000376406 UBXN1Q04323 297 aa12.39□□□□□ -0.43
MDC1-201ENST00000376406 TRMT2AQ8IZ69 625 aaKnown RBP12.39□□□□□ -0.43
MDC1-201ENST00000376406 MIGA1Q8NAN2 632 aa12.39□□□□□ -0.43
MDC1-201ENST00000376406 CAMSAP1Q5T5Y3 1602 aa12.39□□□□□ -0.43
MDC1-201ENST00000376406 GOLGA6L10A0A0M3HER8 536 aa12.39□□□□□ -0.43
MDC1-201ENST00000376406 HSP90AA4PQ58FG1 418 aa12.39□□□□□ -0.43
MDC1-201ENST00000376406 UNC13BO14795 1591 aa12.39□□□□□ -0.43
MDC1-201ENST00000376406 SMC1AQ14683 1233 aaKnown RBP12.39□□□□□ -0.43
MDC1-201ENST00000376406 GRIPAP1Q4V328 841 aa12.39□□□□□ -0.43
MDC1-201ENST00000376406 MAATS1Q7Z4T9 603 aa12.39□□□□□ -0.43
MDC1-201ENST00000376406 MSANTD4Q8NCY6 345 aa12.39□□□□□ -0.43
MDC1-201ENST00000376406 PLEKHF1Q96S99 279 aa12.39□□□□□ -0.43
MDC1-201ENST00000376406 KRT86O43790 486 aa12.39□□□□□ -0.43
MDC1-201ENST00000376406 TACC1O75410 805 aa12.39□□□□□ -0.43
MDC1-201ENST00000376406 KRT13P13646 458 aa12.39□□□□□ -0.43
MDC1-201ENST00000376406 ITGA6P23229 1130 aa12.39□□□□□ -0.43
MDC1-201ENST00000376406 DTHD1Q6ZMT9 781 aa12.39□□□□□ -0.43
MDC1-201ENST00000376406 A2ML1A8K2U0 1454 aa12.39□□□□□ -0.43
MDC1-201ENST00000376406 CCDC129Q6ZRS4 1044 aa12.39□□□□□ -0.43
MDC1-201ENST00000376406 POLR1AO95602 1720 aaPredicted RBP12.39□□□□□ -0.43
MDC1-201ENST00000376406 DEXIO95424 95 aa12.38□□□□□ -0.43
MDC1-201ENST00000376406 CPA1P15085 419 aa12.38□□□□□ -0.43
MDC1-201ENST00000376406 GTF2F1P35269 517 aaKnown RBP eCLIP12.38□□□□□ -0.43
MDC1-201ENST00000376406 GPR162Q16538 588 aa12.38□□□□□ -0.43
MDC1-201ENST00000376406 AATKQ6ZMQ8 1374 aa12.38□□□□□ -0.43
MDC1-201ENST00000376406 PARP1P09874 1014 aaKnown RBP12.38□□□□□ -0.43
MDC1-201ENST00000376406 PRPHP41219 470 aa12.38□□□□□ -0.43
MDC1-201ENST00000376406 PRPF4BQ13523 1007 aaKnown RBP12.38□□□□□ -0.43
MDC1-201ENST00000376406 XAGE2Q96GT9 111 aa12.38□□□□□ -0.43
MDC1-201ENST00000376406 SPC25Q9HBM1 224 aa12.38□□□□□ -0.43
MDC1-201ENST00000376406 LMAN1P49257 510 aa12.38□□□□□ -0.43
MDC1-201ENST00000376406 MYL5Q02045 173 aa12.38□□□□□ -0.43
MDC1-201ENST00000376406 SUCLG2Q96I99 432 aa12.38□□□□□ -0.43
MDC1-201ENST00000376406 ZSWIM4Q9H7M6 989 aa12.38□□□□□ -0.43
MDC1-201ENST00000376406 RILPL1Q5EBL4 403 aa12.38□□□□□ -0.43
MDC1-201ENST00000376406 IQUBQ8NA54 791 aa12.38□□□□□ -0.43
MDC1-201ENST00000376406 GPHNQ9NQX3 736 aaPredicted RBP12.38□□□□□ -0.43
MDC1-201ENST00000376406 BIN2Q9UBW5 565 aaPredicted RBP12.38□□□□□ -0.43
MDC1-201ENST00000376406 RIMBP2O15034 1052 aa12.38□□□□□ -0.43
MDC1-201ENST00000376406 ATP2B4P23634 1241 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms