RNA–Protein interactions for RNA: ENST00000376395.8

UBQLN1-202, Transcript of ubiquilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN1, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-202ENST00000376395 FUCA2Q9BTY2 467 aa16.92■□□□□ 0.3
UBQLN1-202ENST00000376395 SLC5A1P13866 664 aa16.91■□□□□ 0.3
UBQLN1-202ENST00000376395 DNAJC10Q8IXB1 793 aa16.91■□□□□ 0.3
UBQLN1-202ENST00000376395 ZHX3Q9H4I2 956 aa16.91■□□□□ 0.3
UBQLN1-202ENST00000376395 PCDHA5Q9Y5H7 936 aa16.91■□□□□ 0.3
UBQLN1-202ENST00000376395 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.91■□□□□ 0.3
UBQLN1-202ENST00000376395 PLEKHG1Q9ULL1 1385 aa16.91■□□□□ 0.3
UBQLN1-202ENST00000376395 ZNF532Q9HCE3 1301 aa16.91■□□□□ 0.3
UBQLN1-202ENST00000376395 KIF20AO95235 890 aa16.91■□□□□ 0.3
UBQLN1-202ENST00000376395 RRAGBQ5VZM2 374 aa16.91■□□□□ 0.3
UBQLN1-202ENST00000376395 IQCA1Q86XH1 822 aa16.91■□□□□ 0.3
UBQLN1-202ENST00000376395 CTCFLQ8NI51 663 aaPredicted RBP16.91■□□□□ 0.3
UBQLN1-202ENST00000376395 EEF2KMTQ96G04 330 aa16.91■□□□□ 0.3
UBQLN1-202ENST00000376395 PPP1R13BQ96KQ4 1090 aa16.91■□□□□ 0.3
UBQLN1-202ENST00000376395 ST7Q9NRC1 585 aa16.91■□□□□ 0.3
UBQLN1-202ENST00000376395 CYP7A1P22680 504 aa16.91■□□□□ 0.3
UBQLN1-202ENST00000376395 TTF1Q15361 905 aaPredicted RBP16.91■□□□□ 0.3
UBQLN1-202ENST00000376395 ZNF174Q15697 407 aa16.91■□□□□ 0.3
UBQLN1-202ENST00000376395 ATL3Q6DD88 541 aa16.91■□□□□ 0.3
UBQLN1-202ENST00000376395 TIGD1Q96MW7 591 aa16.91■□□□□ 0.3
UBQLN1-202ENST00000376395 USP31Q70CQ4 1352 aa16.91■□□□□ 0.3
UBQLN1-202ENST00000376395 EPS15P42566 896 aa16.9■□□□□ 0.3
UBQLN1-202ENST00000376395 MATR3P43243 847 aaKnown RBP eCLIP16.9■□□□□ 0.3
UBQLN1-202ENST00000376395 CCDC181Q5TID7 509 aa16.9■□□□□ 0.3
UBQLN1-202ENST00000376395 TAF3Q5VWG9 929 aa16.9■□□□□ 0.3
UBQLN1-202ENST00000376395 YEATS4O95619 227 aa16.9■□□□□ 0.3
UBQLN1-202ENST00000376395 ATP2B2Q01814 1243 aa16.9■□□□□ 0.3
UBQLN1-202ENST00000376395 SERTAD1Q9UHV2 236 aa16.9■□□□□ 0.3
UBQLN1-202ENST00000376395 ETF1P62495 437 aaKnown RBP16.89■□□□□ 0.3
UBQLN1-202ENST00000376395 VPS16Q9H269 839 aa16.89■□□□□ 0.3
UBQLN1-202ENST00000376395 VWA3AA6NCI4 1184 aa16.89■□□□□ 0.29
UBQLN1-202ENST00000376395 H0YHG0 523 aa16.89■□□□□ 0.29
UBQLN1-202ENST00000376395 CCDC191Q8NCU4 936 aa16.89■□□□□ 0.29
UBQLN1-202ENST00000376395 DRC1Q96MC2 740 aa16.89■□□□□ 0.29
UBQLN1-202ENST00000376395 CENPHQ9H3R5 247 aa16.89■□□□□ 0.29
UBQLN1-202ENST00000376395 RTEL1Q9NZ71 1219 aa16.89■□□□□ 0.29
UBQLN1-202ENST00000376395 PPP2R3AQ06190 1150 aa16.89■□□□□ 0.29
UBQLN1-202ENST00000376395 VGLL3A8MV65 326 aa16.88■□□□□ 0.29
UBQLN1-202ENST00000376395 KMT5BQ4FZB7 885 aa16.88■□□□□ 0.29
UBQLN1-202ENST00000376395 CATIPQ7Z7H3 387 aa16.88■□□□□ 0.29
UBQLN1-202ENST00000376395 HINFPQ9BQA5 517 aa16.88■□□□□ 0.29
UBQLN1-202ENST00000376395 CCDC175P0C221 793 aa16.88■□□□□ 0.29
UBQLN1-202ENST00000376395 NEK11Q8NG66 645 aa16.88■□□□□ 0.29
UBQLN1-202ENST00000376395 BBXQ8WY36 941 aaPredicted RBP16.88■□□□□ 0.29
UBQLN1-202ENST00000376395 CAPZA3Q96KX2 299 aa16.88■□□□□ 0.29
UBQLN1-202ENST00000376395 CRACR2AQ9BSW2 395 aa16.88■□□□□ 0.29
UBQLN1-202ENST00000376395 RNF41Q9H4P4 317 aaPredicted RBP16.88■□□□□ 0.29
UBQLN1-202ENST00000376395 GUCA1BQ9UMX6 200 aa16.88■□□□□ 0.29
UBQLN1-202ENST00000376395 GOLGA6L9A6NEM1 432 aa16.88■□□□□ 0.29
UBQLN1-202ENST00000376395 ERCC3P19447 782 aa16.88■□□□□ 0.29
UBQLN1-202ENST00000376395 IQCB1Q15051 598 aa16.88■□□□□ 0.29
UBQLN1-202ENST00000376395 TRIM75PA6NK02 468 aa16.87■□□□□ 0.29
UBQLN1-202ENST00000376395 FKBP15Q5T1M5 1219 aa16.87■□□□□ 0.29
UBQLN1-202ENST00000376395 CCDC148Q8NFR7 591 aa16.87■□□□□ 0.29
UBQLN1-202ENST00000376395 GDAP1L1Q96MZ0 367 aa16.87■□□□□ 0.29
UBQLN1-202ENST00000376395 IMPACTQ9P2X3 320 aa16.87■□□□□ 0.29
UBQLN1-202ENST00000376395 NRKQ7Z2Y5 1582 aa16.87■□□□□ 0.29
UBQLN1-202ENST00000376395 ZSCAN20P17040 1043 aaPredicted RBP16.87■□□□□ 0.29
UBQLN1-202ENST00000376395 IGSF22Q8N9C0 903 aa16.87■□□□□ 0.29
UBQLN1-202ENST00000376395 CDC42BPGQ6DT37 1551 aa16.87■□□□□ 0.29
UBQLN1-202ENST00000376395 USP32Q8NFA0 1604 aa16.87■□□□□ 0.29
UBQLN1-202ENST00000376395 VAT1LQ9HCJ6 419 aa16.87■□□□□ 0.29
UBQLN1-202ENST00000376395 VPS54Q9P1Q0 977 aa16.87■□□□□ 0.29
UBQLN1-202ENST00000376395 VPS18Q9P253 973 aa16.87■□□□□ 0.29
UBQLN1-202ENST00000376395 CMA1P23946 247 aa16.86■□□□□ 0.29
UBQLN1-202ENST00000376395 MCM7P33993 719 aa16.86■□□□□ 0.29
UBQLN1-202ENST00000376395 SMYD4Q8IYR2 804 aaPredicted RBP16.86■□□□□ 0.29
UBQLN1-202ENST00000376395 TMEM232C9JQI7 657 aa16.86■□□□□ 0.29
UBQLN1-202ENST00000376395 ACSBG1Q96GR2 724 aa16.86■□□□□ 0.29
UBQLN1-202ENST00000376395 C19orf44Q9H6X5 657 aa16.86■□□□□ 0.29
UBQLN1-202ENST00000376395 V9GY48 417 aaPredicted RBP16.86■□□□□ 0.29
UBQLN1-202ENST00000376395 ERBB3P21860 1342 aa16.86■□□□□ 0.29
UBQLN1-202ENST00000376395 CYP27B1O15528 508 aa16.86■□□□□ 0.29
UBQLN1-202ENST00000376395 KIF23Q02241 960 aaPredicted RBP16.86■□□□□ 0.29
UBQLN1-202ENST00000376395 SCARF1Q14162 830 aa16.86■□□□□ 0.29
UBQLN1-202ENST00000376395 DHX40Q8IX18 779 aaKnown RBP16.86■□□□□ 0.29
UBQLN1-202ENST00000376395 BLZF1Q9H2G9 400 aa16.86■□□□□ 0.29
UBQLN1-202ENST00000376395 PATL2C9JE40 543 aaKnown RBP16.85■□□□□ 0.29
UBQLN1-202ENST00000376395 PHKA1P46020 1223 aa16.85■□□□□ 0.29
UBQLN1-202ENST00000376395 PPARDQ03181 441 aa16.85■□□□□ 0.29
UBQLN1-202ENST00000376395 POSTNQ15063 836 aa16.85■□□□□ 0.29
UBQLN1-202ENST00000376395 DHX37Q8IY37 1157 aaKnown RBP16.85■□□□□ 0.29
UBQLN1-202ENST00000376395 IFIT1BQ5T764 474 aaKnown RBP16.85■□□□□ 0.29
UBQLN1-202ENST00000376395 TCHHQ07283 1943 aa16.85■□□□□ 0.29
UBQLN1-202ENST00000376395 ZNF609O15014 1411 aa16.85■□□□□ 0.29
UBQLN1-202ENST00000376395 CTDNEP1O95476 244 aa16.85■□□□□ 0.29
UBQLN1-202ENST00000376395 SETQ01105 290 aaPredicted RBP16.85■□□□□ 0.29
UBQLN1-202ENST00000376395 NR5A1Q13285 461 aa16.85■□□□□ 0.29
UBQLN1-202ENST00000376395 FMR1NBQ8N0W7 255 aaPredicted RBP16.85■□□□□ 0.29
UBQLN1-202ENST00000376395 GREM2Q9H772 168 aa16.85■□□□□ 0.29
UBQLN1-202ENST00000376395 KANK3Q6NY19 840 aa16.85■□□□□ 0.29
UBQLN1-202ENST00000376395 NUTM2AQ8IVF1 878 aaPredicted RBP16.85■□□□□ 0.29
UBQLN1-202ENST00000376395 GOLGA1Q92805 767 aa16.85■□□□□ 0.29
UBQLN1-202ENST00000376395 TSPYL1Q9H0U9 437 aa16.85■□□□□ 0.29
UBQLN1-202ENST00000376395 CASP1P29466 404 aa16.84■□□□□ 0.29
UBQLN1-202ENST00000376395 USP5P45974 858 aa16.84■□□□□ 0.29
UBQLN1-202ENST00000376395 GABPB1Q06547 395 aaPredicted RBP16.84■□□□□ 0.29
UBQLN1-202ENST00000376395 SOGA3Q5TF21 947 aa16.84■□□□□ 0.29
UBQLN1-202ENST00000376395 DENND2AQ9ULE3 1009 aa16.84■□□□□ 0.29
UBQLN1-202ENST00000376395 CCDC194A0A1B0GVG4 234 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 131.1 ms