RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 DCBLD2Q96PD2 775 aa12.52□□□□□ -0.41
PDPN-203ENST00000376061 STRBPQ96SI9 672 aaKnown RBP12.52□□□□□ -0.41
PDPN-203ENST00000376061 RIOK1Q9BRS2 568 aaKnown RBP12.52□□□□□ -0.41
PDPN-203ENST00000376061 VPS33BQ9H267 617 aa12.52□□□□□ -0.41
PDPN-203ENST00000376061 TAOK3Q9H2K8 898 aa12.52□□□□□ -0.41
PDPN-203ENST00000376061 ARMT1Q9H993 441 aa12.52□□□□□ -0.41
PDPN-203ENST00000376061 SNX14Q9Y5W7 946 aa12.52□□□□□ -0.41
PDPN-203ENST00000376061 DICER1Q9UPY3 1922 aaKnown RBP12.52□□□□□ -0.41
PDPN-203ENST00000376061 MROH7-TTC4A0A0A0MT08 1334 aa12.51□□□□□ -0.41
PDPN-203ENST00000376061 MAGEB6P1A0A0J9YX57 407 aa12.51□□□□□ -0.41
PDPN-203ENST00000376061 YDJCA8MPS7 323 aa12.51□□□□□ -0.41
PDPN-203ENST00000376061 SLC27A2O14975 620 aa12.51□□□□□ -0.41
PDPN-203ENST00000376061 IARSP41252 1262 aaKnown RBP12.51□□□□□ -0.41
PDPN-203ENST00000376061 DIXDC1Q155Q3 683 aa12.51□□□□□ -0.41
PDPN-203ENST00000376061 DACT2Q5SW24 774 aa12.51□□□□□ -0.41
PDPN-203ENST00000376061 CREB3L3Q68CJ9 461 aa12.51□□□□□ -0.41
PDPN-203ENST00000376061 TTLL5Q6EMB2 1281 aa12.51□□□□□ -0.41
PDPN-203ENST00000376061 RASEFQ8IZ41 740 aa12.51□□□□□ -0.41
PDPN-203ENST00000376061 LARGE2Q8N3Y3 721 aa12.51□□□□□ -0.41
PDPN-203ENST00000376061 MXD3Q9BW11 206 aa12.51□□□□□ -0.41
PDPN-203ENST00000376061 KCNQ5Q9NR82 932 aa12.51□□□□□ -0.41
PDPN-203ENST00000376061 SUGT1Q9Y2Z0 365 aa12.51□□□□□ -0.41
PDPN-203ENST00000376061 SBF1O95248 1867 aa12.5□□□□□ -0.41
PDPN-203ENST00000376061 RPAP1Q9BWH6 1393 aaPredicted RBP12.5□□□□□ -0.41
PDPN-203ENST00000376061 SOCS7O14512 581 aa12.5□□□□□ -0.41
PDPN-203ENST00000376061 FKBP1AP62942 108 aaKnown RBP12.5□□□□□ -0.41
PDPN-203ENST00000376061 DYNLL1P63167 89 aaKnown RBP12.5□□□□□ -0.41
PDPN-203ENST00000376061 GSTO1P78417 241 aa12.5□□□□□ -0.41
PDPN-203ENST00000376061 RABEP1Q15276 862 aa12.5□□□□□ -0.41
PDPN-203ENST00000376061 STRIP1Q5VSL9 837 aa12.5□□□□□ -0.41
PDPN-203ENST00000376061 TAF6LQ9Y6J9 622 aa12.5□□□□□ -0.41
PDPN-203ENST00000376061 GAKO14976 1311 aa12.49□□□□□ -0.41
PDPN-203ENST00000376061 ZMYM6O95789 1325 aa12.49□□□□□ -0.41
PDPN-203ENST00000376061 USP17L3A6NCW0 530 aa12.49□□□□□ -0.41
PDPN-203ENST00000376061 USP17L4A6NCW7 530 aa12.49□□□□□ -0.41
PDPN-203ENST00000376061 RASSF7Q02833 373 aa12.49□□□□□ -0.41
PDPN-203ENST00000376061 RNF20Q5VTR2 975 aa12.49□□□□□ -0.41
PDPN-203ENST00000376061 USP17L1Q7RTZ2 530 aa12.49□□□□□ -0.41
PDPN-203ENST00000376061 NIM1KQ8IY84 436 aa12.49□□□□□ -0.41
PDPN-203ENST00000376061 DDRGK1Q96HY6 314 aa12.49□□□□□ -0.41
PDPN-203ENST00000376061 EPB41L4AQ9HCS5 686 aaPredicted RBP12.49□□□□□ -0.41
PDPN-203ENST00000376061 GSG1L2A8MUP6 293 aa12.48□□□□□ -0.41
PDPN-203ENST00000376061 PRKAB2O43741 272 aa12.48□□□□□ -0.41
PDPN-203ENST00000376061 CYP21A2P08686 494 aa12.48□□□□□ -0.41
PDPN-203ENST00000376061 GNAT2P19087 354 aa12.48□□□□□ -0.41
PDPN-203ENST00000376061 SYT17Q9BSW7 474 aa12.48□□□□□ -0.41
PDPN-203ENST00000376061 AATFQ9NY61 560 aaKnown RBP eCLIP12.48□□□□□ -0.41
PDPN-203ENST00000376061 SLC4A4Q9Y6R1 1079 aa12.48□□□□□ -0.41
PDPN-203ENST00000376061 F8W031 263 aaPredicted RBP12.47□□□□□ -0.41
PDPN-203ENST00000376061 FGAP02671 866 aa12.47□□□□□ -0.41
PDPN-203ENST00000376061 LDHCP07864 332 aa12.47□□□□□ -0.41
PDPN-203ENST00000376061 ZKSCAN1P17029 563 aaPredicted RBP12.47□□□□□ -0.41
PDPN-203ENST00000376061 PRELPP51888 382 aa12.47□□□□□ -0.41
PDPN-203ENST00000376061 ALX1Q15699 326 aa12.47□□□□□ -0.41
PDPN-203ENST00000376061 SLF2Q8IX21 1173 aa12.47□□□□□ -0.41
PDPN-203ENST00000376061 CTNNA3Q9UI47 895 aa12.47□□□□□ -0.41
PDPN-203ENST00000376061 ZNRF3Q9ULT6 936 aa12.47□□□□□ -0.41
PDPN-203ENST00000376061 TTF2Q9UNY4 1162 aaKnown RBP12.47□□□□□ -0.41
PDPN-203ENST00000376061 DAGLAQ9Y4D2 1042 aa12.47□□□□□ -0.41
PDPN-203ENST00000376061 GPR75-ASB3A0A0A6YYF3 556 aa12.46□□□□□ -0.41
PDPN-203ENST00000376061 PATL2C9JE40 543 aaKnown RBP12.46□□□□□ -0.41
PDPN-203ENST00000376061 APPP05067 770 aa12.46□□□□□ -0.41
PDPN-203ENST00000376061 PPP4CP60510 307 aa12.46□□□□□ -0.41
PDPN-203ENST00000376061 ADCK5Q3MIX3 580 aa12.46□□□□□ -0.41
PDPN-203ENST00000376061 TSGA10IPQ3SY00 556 aa12.46□□□□□ -0.41
PDPN-203ENST00000376061 SH3RF3Q8TEJ3 882 aaPredicted RBP12.46□□□□□ -0.41
PDPN-203ENST00000376061 SDR42E1Q8WUS8 393 aa12.46□□□□□ -0.41
PDPN-203ENST00000376061 FAM163AQ96GL9 167 aaPredicted RBP12.46□□□□□ -0.41
PDPN-203ENST00000376061 JAKMIP1Q96N16 626 aaKnown RBP12.46□□□□□ -0.41
PDPN-203ENST00000376061 IPO9Q96P70 1041 aaKnown RBP12.46□□□□□ -0.41
PDPN-203ENST00000376061 NOL10Q9BSC4 688 aaKnown RBP12.46□□□□□ -0.41
PDPN-203ENST00000376061 UPF3BQ9BZI7 483 aaKnown RBP12.46□□□□□ -0.41
PDPN-203ENST00000376061 CRNKL1Q9BZJ0 848 aaKnown RBP12.46□□□□□ -0.41
PDPN-203ENST00000376061 MYH1P12882 1939 aa12.46□□□□□ -0.41
PDPN-203ENST00000376061 SRCAPQ6ZRS2 3230 aa12.46□□□□□ -0.42
PDPN-203ENST00000376061 RAD17O75943 681 aa12.45□□□□□ -0.42
PDPN-203ENST00000376061 CD2BP2O95400 341 aaKnown RBP12.45□□□□□ -0.42
PDPN-203ENST00000376061 BAG3O95817 575 aa12.45□□□□□ -0.42
PDPN-203ENST00000376061 BTDP43251 543 aa12.45□□□□□ -0.42
PDPN-203ENST00000376061 TDO2P48775 406 aa12.45□□□□□ -0.42
PDPN-203ENST00000376061 SCNN1DP51172 638 aa12.45□□□□□ -0.42
PDPN-203ENST00000376061 HAND2P61296 217 aa12.45□□□□□ -0.42
PDPN-203ENST00000376061 KRT32Q14532 448 aa12.45□□□□□ -0.42
PDPN-203ENST00000376061 IMMTQ16891 758 aaKnown RBP12.45□□□□□ -0.42
PDPN-203ENST00000376061 RSBN1LQ6PCB5 846 aaPredicted RBP12.45□□□□□ -0.42
PDPN-203ENST00000376061 STOX1Q6ZVD7 989 aa12.45□□□□□ -0.42
PDPN-203ENST00000376061 KIAA0825Q8IV33 1275 aa12.45□□□□□ -0.42
PDPN-203ENST00000376061 IFNL3Q8IZI9 196 aa12.45□□□□□ -0.42
PDPN-203ENST00000376061 SNX21Q969T3 373 aa12.45□□□□□ -0.42
PDPN-203ENST00000376061 NACAP1Q9BZK3 213 aa12.45□□□□□ -0.42
PDPN-203ENST00000376061 TM6SF1Q9BZW5 370 aa12.45□□□□□ -0.42
PDPN-203ENST00000376061 NBPF3Q9H094 633 aa12.45□□□□□ -0.42
PDPN-203ENST00000376061 NAPBQ9H115 298 aa12.45□□□□□ -0.42
PDPN-203ENST00000376061 MYO3BQ8WXR4 1341 aa12.45□□□□□ -0.42
PDPN-203ENST00000376061 PSMD14O00487 310 aa12.44□□□□□ -0.42
PDPN-203ENST00000376061 VIL1P09327 827 aaKnown RBP12.44□□□□□ -0.42
PDPN-203ENST00000376061 CASTP20810 708 aaKnown RBP12.44□□□□□ -0.42
PDPN-203ENST00000376061 RHBDL3P58872 404 aa12.44□□□□□ -0.42
PDPN-203ENST00000376061 COL9A3Q14050 684 aaPredicted RBP12.44□□□□□ -0.42
PDPN-203ENST00000376061 GIMAP6Q6P9H5 292 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms